RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ANKLE2Q86XL3 938 aa34.56■■■■□ 3.12
HOMER3-201ENST00000221222 SPATA31E1Q6ZUB1 1445 aa34.54■■■■□ 3.12
HOMER3-201ENST00000221222 ZFYVE9O95405 1425 aa34.52■■■■□ 3.12
HOMER3-201ENST00000221222 UBAP1LF5GYI3 381 aa34.51■■■■□ 3.12
HOMER3-201ENST00000221222 SCAF11Q99590 1463 aaKnown RBP34.48■■■■□ 3.11
HOMER3-201ENST00000221222 RIMS2Q9UQ26 1411 aa34.48■■■■□ 3.11
HOMER3-201ENST00000221222 NPHP4O75161 1426 aaPredicted RBP34.47■■■■□ 3.11
HOMER3-201ENST00000221222 NEXMIFQ5QGS0 1516 aa34.46■■■■□ 3.11
HOMER3-201ENST00000221222 MED14O60244 1454 aa34.45■■■■□ 3.11
HOMER3-201ENST00000221222 LTKP29376 864 aa34.45■■■■□ 3.11
HOMER3-201ENST00000221222 ZNF326Q5BKZ1 582 aaKnown RBP34.45■■■■□ 3.11
HOMER3-201ENST00000221222 EID1Q9Y6B2 187 aa34.45■■■■□ 3.11
HOMER3-201ENST00000221222 TXNDC2Q86VQ3 553 aa34.44■■■■□ 3.1
HOMER3-201ENST00000221222 HDGFP51858 240 aaKnown RBP34.43■■■■□ 3.1
HOMER3-201ENST00000221222 RPGRIP1LQ68CZ1 1315 aa34.42■■■■□ 3.1
HOMER3-201ENST00000221222 PPLO60437 1756 aa34.42■■■■□ 3.1
HOMER3-201ENST00000221222 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.42■■■■□ 3.1
HOMER3-201ENST00000221222 IFT172Q9UG01 1749 aa34.41■■■■□ 3.1
HOMER3-201ENST00000221222 IQGAP1P46940 1657 aa34.41■■■■□ 3.1
HOMER3-201ENST00000221222 DISP3Q9P2K9 1392 aa34.39■■■■□ 3.1
HOMER3-201ENST00000221222 CPS1P31327 1500 aa34.38■■■■□ 3.09
HOMER3-201ENST00000221222 RGL3Q3MIN7 710 aa34.37■■■■□ 3.09
HOMER3-201ENST00000221222 SIN3AQ96ST3 1273 aa34.36■■■■□ 3.09
HOMER3-201ENST00000221222 CLSPNQ9HAW4 1339 aa34.34■■■■□ 3.09
HOMER3-201ENST00000221222 PLEKHG1Q9ULL1 1385 aa34.33■■■■□ 3.09
HOMER3-201ENST00000221222 SCAF1Q9H7N4 1312 aaKnown RBP34.33■■■■□ 3.09
HOMER3-201ENST00000221222 PPP1R15AO75807 674 aaPredicted RBP34.32■■■■□ 3.08
HOMER3-201ENST00000221222 NUTM2DQ5VT03 806 aaPredicted RBP34.3■■■■□ 3.08
HOMER3-201ENST00000221222 VGFO15240 615 aaPredicted RBP34.29■■■■□ 3.08
HOMER3-201ENST00000221222 PIP4K2BP78356 416 aa34.28■■■■□ 3.08
HOMER3-201ENST00000221222 STRCP1A6NGW2 1772 aa34.27■■■■□ 3.08
HOMER3-201ENST00000221222 MYOM2P54296 1465 aa34.27■■■■□ 3.08
HOMER3-201ENST00000221222 SETBP1Q9Y6X0 1596 aa34.26■■■■□ 3.07
HOMER3-201ENST00000221222 NEUROD1Q13562 356 aa34.25■■■■□ 3.07
HOMER3-201ENST00000221222 CCER1Q8TC90 406 aaPredicted RBP34.25■■■■□ 3.07
HOMER3-201ENST00000221222 NRXN3Q9Y4C0 1643 aa34.25■■■■□ 3.07
HOMER3-201ENST00000221222 NRXN1Q9ULB1 1477 aa34.21■■■■□ 3.07
HOMER3-201ENST00000221222 TOM1O60784 492 aa34.21■■■■□ 3.07
HOMER3-201ENST00000221222 STAC3Q96MF2 364 aa34.21■■■■□ 3.07
HOMER3-201ENST00000221222 DIP2AQ14689 1571 aa34.2■■■■□ 3.07
HOMER3-201ENST00000221222 ADAMTS13Q76LX8 1427 aa34.19■■■■□ 3.06
HOMER3-201ENST00000221222 ILDR2Q71H61 639 aa34.19■■■■□ 3.06
HOMER3-201ENST00000221222 ADGRF5Q8IZF2 1346 aa34.18■■■■□ 3.06
HOMER3-201ENST00000221222 DCAF11Q8TEB1 546 aa34.18■■■■□ 3.06
HOMER3-201ENST00000221222 BCANQ96GW7 911 aa34.16■■■■□ 3.06
HOMER3-201ENST00000221222 LRRC7Q96NW7 1537 aa34.16■■■■□ 3.06
HOMER3-201ENST00000221222 PIK3C2GO75747 1445 aa34.16■■■■□ 3.06
HOMER3-201ENST00000221222 HSPA1LP34931 641 aa34.14■■■■□ 3.06
HOMER3-201ENST00000221222 SLC26A8Q96RN1 970 aa34.14■■■■□ 3.06
HOMER3-201ENST00000221222 L3MBTL2Q969R5 705 aa34.13■■■■□ 3.05
HOMER3-201ENST00000221222 TBX22Q9Y458 520 aa34.13■■■■□ 3.05
HOMER3-201ENST00000221222 SETD1AO15047 1707 aaKnown RBP34.13■■■■□ 3.05
HOMER3-201ENST00000221222 SENP3Q9H4L4 574 aaPredicted RBP34.12■■■■□ 3.05
HOMER3-201ENST00000221222 ALKQ9UM73 1620 aa34.11■■■■□ 3.05
HOMER3-201ENST00000221222 TONSLQ96HA7 1378 aa34.1■■■■□ 3.05
HOMER3-201ENST00000221222 KDM2AQ9Y2K7 1162 aa34.1■■■■□ 3.05
HOMER3-201ENST00000221222 LAMC1P11047 1609 aa34.07■■■■□ 3.04
HOMER3-201ENST00000221222 PIK3R4Q99570 1358 aa34.06■■■■□ 3.04
HOMER3-201ENST00000221222 CHD2O14647 1828 aaKnown RBP34.05■■■■□ 3.04
HOMER3-201ENST00000221222 PRAG1Q86YV5 1406 aa34.02■■■■□ 3.04
HOMER3-201ENST00000221222 NWD1Q149M9 1564 aa34.02■■■■□ 3.04
HOMER3-201ENST00000221222 C14orf93Q9H972 538 aaKnown RBP34.01■■■■□ 3.04
HOMER3-201ENST00000221222 TIMELESSQ9UNS1 1208 aa34.01■■■■□ 3.04
HOMER3-201ENST00000221222 METP08581 1390 aa34.01■■■■□ 3.03
HOMER3-201ENST00000221222 KIAA1210Q9ULL0 1709 aa33.99■■■■□ 3.03
HOMER3-201ENST00000221222 XIRP1Q702N8 1843 aaKnown RBP33.98■■■■□ 3.03
HOMER3-201ENST00000221222 KCNA6P17658 529 aa33.97■■■■□ 3.03
HOMER3-201ENST00000221222 ASXL1Q8IXJ9 1541 aa33.96■■■■□ 3.03
HOMER3-201ENST00000221222 PTPRUQ92729 1446 aa33.95■■■■□ 3.03
HOMER3-201ENST00000221222 CFAP70Q5T0N1 1121 aa33.95■■■■□ 3.02
HOMER3-201ENST00000221222 XRN1Q8IZH2 1706 aaKnown RBP33.95■■■■□ 3.02
HOMER3-201ENST00000221222 NKTRP30414 1462 aaKnown RBP33.91■■■■□ 3.02
HOMER3-201ENST00000221222 ADGRB1O14514 1584 aa33.91■■■■□ 3.02
HOMER3-201ENST00000221222 MED1Q15648 1581 aaPredicted RBP33.9■■■■□ 3.02
HOMER3-201ENST00000221222 TRPM1Q7Z4N2 1603 aa33.89■■■■□ 3.02
HOMER3-201ENST00000221222 RBM33Q96EV2 1170 aaKnown RBP33.88■■■■□ 3.01
HOMER3-201ENST00000221222 SOCS7O14512 581 aa33.87■■■■□ 3.01
HOMER3-201ENST00000221222 AMOTL2Q9Y2J4 779 aa33.87■■■■□ 3.01
HOMER3-201ENST00000221222 TMEM94Q12767 1356 aa33.86■■■■□ 3.01
HOMER3-201ENST00000221222 TMEM132EQ6IEE7 984 aa33.85■■■■□ 3.01
HOMER3-201ENST00000221222 KNDC1Q76NI1 1749 aa33.85■■■■□ 3.01
HOMER3-201ENST00000221222 NBPF8Q3BBV2 869 aa33.85■■■■□ 3.01
HOMER3-201ENST00000221222 PROSER2Q86WR7 435 aaPredicted RBP33.85■■■■□ 3.01
HOMER3-201ENST00000221222 LRPPRCP42704 1394 aaKnown RBP33.83■■■■□ 3.01
HOMER3-201ENST00000221222 YTHDC2Q9H6S0 1430 aaKnown RBP33.83■■■■□ 3.01
HOMER3-201ENST00000221222 TECPR2O15040 1411 aa33.82■■■■□ 3
HOMER3-201ENST00000221222 PTCH1Q13635 1447 aa33.8■■■■□ 3
HOMER3-201ENST00000221222 ABCC11Q96J66 1382 aa33.8■■■■□ 3
HOMER3-201ENST00000221222 NBPF1Q3BBV0 1214 aa33.77■■■■□ 3
HOMER3-201ENST00000221222 RALGAPBQ86X10 1494 aa33.77■■■■□ 3
HOMER3-201ENST00000221222 DLC1Q96QB1 1528 aa33.74■■■□□ 2.99
HOMER3-201ENST00000221222 STK26Q9P289 416 aa33.73■■■□□ 2.99
HOMER3-201ENST00000221222 ROBO2Q9HCK4 1378 aa33.73■■■□□ 2.99
HOMER3-201ENST00000221222 GPRASP1Q5JY77 1395 aa33.72■■■□□ 2.99
HOMER3-201ENST00000221222 NCOA3Q9Y6Q9 1424 aa33.72■■■□□ 2.99
HOMER3-201ENST00000221222 ROCK2O75116 1388 aaKnown RBP33.71■■■□□ 2.99
HOMER3-201ENST00000221222 SIRT1Q96EB6 747 aa33.71■■■□□ 2.99
HOMER3-201ENST00000221222 PHF23Q9BUL5 403 aaPredicted RBP33.7■■■□□ 2.98
HOMER3-201ENST00000221222 FAM135BQ49AJ0 1406 aa33.69■■■□□ 2.98
HOMER3-201ENST00000221222 ARHGEF28Q8N1W1 1705 aaKnown RBP33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms