RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Arhgap23Q69ZH9 1483 aa19.93■□□□□ 0.78
Ssr1-204ENSMUST00000225319 AatkQ80YE4 1365 aa19.92■□□□□ 0.78
Ssr1-204ENSMUST00000225319 Setd1aE9PYH6 1716 aa19.91■□□□□ 0.78
Ssr1-204ENSMUST00000225319 Card11Q8CIS0 1159 aa19.91■□□□□ 0.78
Ssr1-204ENSMUST00000225319 Adamtsl3G3UXC7 1706 aa19.9■□□□□ 0.78
Ssr1-204ENSMUST00000225319 Sall3Q62255 1320 aa19.9■□□□□ 0.78
Ssr1-204ENSMUST00000225319 Erich6D3Z6S9 713 aa19.9■□□□□ 0.78
Ssr1-204ENSMUST00000225319 Hfm1D3Z4R1 1434 aa19.9■□□□□ 0.78
Ssr1-204ENSMUST00000225319 Mroh1E0CZ22 1640 aa19.89■□□□□ 0.77
Ssr1-204ENSMUST00000225319 Ifit1bl1D3Z6F0 470 aa19.89■□□□□ 0.77
Ssr1-204ENSMUST00000225319 Tnnt3Q9QZ47 272 aa19.89■□□□□ 0.77
Ssr1-204ENSMUST00000225319 CltcQ68FD5 1675 aaKnown RBP19.89■□□□□ 0.77
Ssr1-204ENSMUST00000225319 Plxnc1Q9QZC2 1574 aa19.89■□□□□ 0.77
Ssr1-204ENSMUST00000225319 Rock2P70336 1388 aa19.88■□□□□ 0.77
Ssr1-204ENSMUST00000225319 Skint5A7XUY5 1461 aa19.87■□□□□ 0.77
Ssr1-204ENSMUST00000225319 Ahdc1Q6PAL7 1594 aaKnown RBP19.87■□□□□ 0.77
Ssr1-204ENSMUST00000225319 Stra8P70278 393 aa19.85■□□□□ 0.77
Ssr1-204ENSMUST00000225319 Plekhg5Q66T02 1073 aa19.83■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Stk24Q99KH8 431 aa19.83■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Afap1Q80YS6 731 aa19.82■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Cdk5rap2Q8K389 1822 aa19.82■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Myo3aQ8K3H5 1613 aa19.81■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Myom1Q62234 1667 aaKnown RBP19.8■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Pola1P33609 1465 aa19.8■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Sipa1l1Q8C0T5 1782 aa19.78■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Dnajc5gQ8C632 165 aa19.78■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Itsn1Q9Z0R4 1714 aa19.78■□□□□ 0.76
Ssr1-204ENSMUST00000225319 Med14A2ABV5 1459 aaKnown RBP19.77■□□□□ 0.76
Ssr1-204ENSMUST00000225319 DnmbpQ6TXD4 1580 aa19.76■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Kif13aQ9EQW7 1749 aa19.75■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Kdm5aQ3UXZ9 1690 aa19.75■□□□□ 0.75
Ssr1-204ENSMUST00000225319 PtprmP28828 1452 aa19.74■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Tubgcp6G5E8P0 1769 aa19.73■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Mapk8ip2Q9ERE9 830 aa19.73■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Itsn2Q9Z0R6 1659 aa19.72■□□□□ 0.75
Ssr1-204ENSMUST00000225319 CenpbP27790 599 aa19.72■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Stard8Q8K031 1019 aa19.72■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Nphp4P59240 1425 aa19.71■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Smg6P61406 1418 aaKnown RBP19.71■□□□□ 0.75
Ssr1-204ENSMUST00000225319 AU022751B1B0V2 589 aa19.71■□□□□ 0.75
Ssr1-204ENSMUST00000225319 Prrc2bQ7TPM1 1486 aaKnown RBP19.7■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Naip7Q9JIB3 1402 aa19.68■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Ift172Q6VH22 1749 aa19.68■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Srpk2O54781 681 aaKnown RBP19.67■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Kdm2aP59997 1161 aa19.67■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Slc52a2Q9D8F3 450 aa19.67■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Zc3h13E9Q784 1729 aaKnown RBP19.67■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Pcdh10E9PXQ7 1057 aa19.66■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Ercc6l2Q9JIM3 1537 aa19.66■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Gm20521D3Z5F7 333 aa19.65■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Srcin1Q9QWI6 1250 aa19.65■□□□□ 0.74
Ssr1-204ENSMUST00000225319 MaddQ80U28 1577 aa19.65■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Sbno1Q689Z5 1390 aa19.65■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Znf710Q3U288 666 aa19.65■□□□□ 0.74
Ssr1-204ENSMUST00000225319 Chd2E9PZM4 1827 aaKnown RBP19.64■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Eif2ak4Q9QZ05 1648 aa19.63■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Lrrc7Q80TE7 1490 aa19.62■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Arhgef28P97433 1693 aa19.62■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Fan1Q69ZT1 1020 aa19.62■□□□□ 0.73
Ssr1-204ENSMUST00000225319 PalldQ9ET54 1408 aa19.61■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Dip2bQ3UH60 1574 aa19.61■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Puf60Q3UEB3 564 aaKnown RBP19.61■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Gemin5Q8BX17 1502 aaKnown RBP19.61■□□□□ 0.73
Ssr1-204ENSMUST00000225319 PplQ9R269 1755 aa19.6■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Gm13695A2AK44 830 aa19.59■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Os9Q8K2C7 672 aa19.59■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Arid4bA2CG63 1314 aaKnown RBP19.58■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Usp40Q8BWR4 1235 aa19.58■□□□□ 0.73
Ssr1-204ENSMUST00000225319 Gtf2e1Q9D0D5 440 aa19.57■□□□□ 0.72
Ssr1-204ENSMUST00000225319 Dip2aQ8BWT5 1523 aa19.54■□□□□ 0.72
Ssr1-204ENSMUST00000225319 Bcl9Q9D219 1425 aa19.53■□□□□ 0.72
Ssr1-204ENSMUST00000225319 PrxO55103 1391 aa19.51■□□□□ 0.71
Ssr1-204ENSMUST00000225319 Safb2Q80YR5 991 aaKnown RBP19.5■□□□□ 0.71
Ssr1-204ENSMUST00000225319 Alpk3Q924C5 1678 aa19.49■□□□□ 0.71
Ssr1-204ENSMUST00000225319 Plekhg1F6S200 1446 aa19.48■□□□□ 0.71
Ssr1-204ENSMUST00000225319 Gm16486A0A1D5RMD1 1434 aa19.47■□□□□ 0.71
Ssr1-204ENSMUST00000225319 Lmtk3Q5XJV6 1424 aa19.46■□□□□ 0.71
Ssr1-204ENSMUST00000225319 Plppr3Q7TPB0 716 aa19.46■□□□□ 0.71
Ssr1-204ENSMUST00000225319 InsrP15208 1372 aa19.45■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Zbtb4Q5F293 982 aa19.45■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Shq1Q7TMX5 569 aa19.45■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Slit3Q9WVB4 1523 aa19.44■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Tmf1B9EKI3 1091 aa19.44■□□□□ 0.7
Ssr1-204ENSMUST00000225319 IqubQ8CDK3 788 aa19.44■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Gm38655A0A286YDK6 273 aa19.43■□□□□ 0.7
Ssr1-204ENSMUST00000225319 4930407I10RikD3Z5T8 1512 aa19.43■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Pank3Q8R2W9 370 aa19.43■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Cep170bQ80U49 1574 aa19.42■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Stag3O70576 1240 aa19.41■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Fam184bQ0KK56 942 aa19.4■□□□□ 0.7
Ssr1-204ENSMUST00000225319 CenpjQ569L8 1344 aa19.4■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Slc24a1Q91WD8 1130 aa19.4■□□□□ 0.7
Ssr1-204ENSMUST00000225319 Zscan10Q3URR7 782 aa19.39■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Q9D9H8 365 aa19.39■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Arap3Q8R5G7 1538 aa19.38■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Abca14E9Q8F8 1683 aa19.38■□□□□ 0.69
Ssr1-204ENSMUST00000225319 PnisrA2AJT4 805 aaKnown RBP19.38■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Slc4a1apE9PX68 744 aa19.38■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Exoc6Q8R313 802 aa19.38■□□□□ 0.69
Ssr1-204ENSMUST00000225319 SafbD3YXK2 937 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms