RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Arid4bA2CG63 1314 aaKnown RBP20.89■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Ifnlr1Q8CGK5 535 aa20.89■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Sall3Q62255 1320 aa20.89■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Abca6Q8K441 1624 aa20.88■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Cep152A2AUM9 1736 aaKnown RBP20.88■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Iqgap3F8VQ29 1632 aa20.87■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Znf518aB2RRF6 1478 aaKnown RBP20.87■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Kif3bQ61771 747 aa20.87■□□□□ 0.93
Sdc1-205ENSMUST00000171158 PtprtQ99M80 1454 aa20.86■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Mink1Q9JM52 1308 aa20.85■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Kcnh8P59111 1102 aa20.85■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Upf2A2AT37 1269 aaKnown RBP20.84■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Abca8aQ8K442 1620 aa20.84■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Slc4a1apE9PX68 744 aa20.83■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Kdm2aP59997 1161 aa20.83■□□□□ 0.93
Sdc1-205ENSMUST00000171158 Ttc21bQ0HA38 1315 aa20.83■□□□□ 0.92
Sdc1-205ENSMUST00000171158 ErbinQ80TH2 1402 aa20.81■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Slc4a3P16283 1227 aa20.8■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Fam184bQ0KK56 942 aa20.8■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Pak3Q61036 559 aa20.8■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Pelp1Q9DBD5 1123 aaKnown RBP20.8■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Lemd3Q9WU40 921 aa20.8■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Clasp1Q80TV8 1535 aaKnown RBP20.8■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Prex1Q69ZK0 1650 aa20.8■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Topbp1Q6ZQF0 1515 aa20.79■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Ppp2r1aQ76MZ3 589 aa20.79■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Rab3gap2Q8BMG7 1366 aa20.79■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Rims1Q99NE5 1463 aa20.79■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Cdk5rap2Q8K389 1822 aa20.78■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Myo3aQ8K3H5 1613 aa20.77■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Rad21Q61550 635 aaKnown RBP20.77■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Trpm1Q2TV84 1622 aa20.77■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Tcerg1Q8CGF7 1100 aaKnown RBP20.77■□□□□ 0.92
Sdc1-205ENSMUST00000171158 Kdm5aQ3UXZ9 1690 aa20.76■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Ehbp1l1Q99MS7 1716 aa20.75■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Arid3cA6PWV5 409 aa20.75■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Gm20521D3Z5F7 333 aa20.75■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Egfem1Q8C088 590 aa20.75■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Atf7ipQ7TT18 1306 aa20.75■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Adgrb3Q80ZF8 1522 aa20.75■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Ak9G3UYQ4 1894 aa20.74■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Col17a1Q07563 1470 aa20.74■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Esx1O88933 382 aa20.73■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Os9Q8K2C7 672 aa20.73■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Ttc41Q692V3 1318 aa20.73■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Nphp4P59240 1425 aa20.73■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Prdm2A2A7B5 1709 aaKnown RBP20.73■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Stk24Q99KH8 431 aa20.72■□□□□ 0.91
Sdc1-205ENSMUST00000171158 AatkQ80YE4 1365 aa20.72■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Stard8Q8K031 1019 aa20.72■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Gtf2e1Q9D0D5 440 aa20.71■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Kif16bB1AVY7 1312 aa20.71■□□□□ 0.91
Sdc1-205ENSMUST00000171158 TnikP83510 1323 aa20.71■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Prkrip1Q9CWV6 186 aaKnown RBP20.71■□□□□ 0.91
Sdc1-205ENSMUST00000171158 Depdc5P61460 1591 aa20.71■□□□□ 0.91
Sdc1-205ENSMUST00000171158 DnmbpQ6TXD4 1580 aa20.7■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Sipa1l1Q8C0T5 1782 aa20.7■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Myom2Q14BI5 1463 aa20.7■□□□□ 0.9
Sdc1-205ENSMUST00000171158 OvosQ3UU35 1456 aa20.69■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Usp40Q8BWR4 1235 aa20.69■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Srpk2O54781 681 aaKnown RBP20.69■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Efcab6Q6P1E8 1516 aa20.68■□□□□ 0.9
Sdc1-205ENSMUST00000171158 NeflP08551 543 aa20.67■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Fan1Q69ZT1 1020 aa20.67■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Myom1Q62234 1667 aaKnown RBP20.66■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Atp10aO54827 1508 aa20.66■□□□□ 0.9
Sdc1-205ENSMUST00000171158 CrbnQ8C7D2 445 aa20.66■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Talpid3E9PV87 1520 aa20.65■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Gli2Q0VGT2 1544 aa20.65■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Akap12Q9WTQ5 1684 aa20.65■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Kif7B7ZNG0 1348 aa20.65■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Uggt1Q6P5E4 1551 aa20.65■□□□□ 0.9
Sdc1-205ENSMUST00000171158 Tecpr2Q3UH45 1423 aa20.64■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Cdc42bpgQ80UW5 1551 aa20.63■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Ino80Q6ZPV2 1559 aa20.62■□□□□ 0.89
Sdc1-205ENSMUST00000171158 AglF8VPN4 1532 aa20.61■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Usp19Q3UJD6 1360 aa20.59■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Plekhh1Q80TI1 1356 aa20.59■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Dcaf11Q91VU6 549 aa20.59■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Mbd3Q9Z2D8 285 aaKnown RBP20.59■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Gprasp1Q5U4C1 1347 aa20.59■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Ptch1Q61115 1434 aa20.58■□□□□ 0.89
Sdc1-205ENSMUST00000171158 Puf60Q3UEB3 564 aaKnown RBP20.58■□□□□ 0.88
Sdc1-205ENSMUST00000171158 Plxnc1Q9QZC2 1574 aa20.57■□□□□ 0.88
Sdc1-205ENSMUST00000171158 AdgbG3UZ78 1657 aa20.55■□□□□ 0.88
Sdc1-205ENSMUST00000171158 Ipo9Q91YE6 1041 aa20.55■□□□□ 0.88
Sdc1-205ENSMUST00000171158 Ift172Q6VH22 1749 aa20.55■□□□□ 0.88
Sdc1-205ENSMUST00000171158 Nlrp6Q91WS2 869 aa20.54■□□□□ 0.88
Sdc1-205ENSMUST00000171158 Dip2cE9PWR4 1557 aa20.53■□□□□ 0.88
Sdc1-205ENSMUST00000171158 RereQ80TZ9 1558 aa20.52■□□□□ 0.88
Sdc1-205ENSMUST00000171158 MaddQ80U28 1577 aa20.52■□□□□ 0.88
Sdc1-205ENSMUST00000171158 Kiaa1107Q80TK0 1369 aa20.52■□□□□ 0.88
Sdc1-205ENSMUST00000171158 Rwdd1Q9CQK7 243 aa20.52■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Speer4f1Q9D5Q6 258 aa20.52■□□□□ 0.87
Sdc1-205ENSMUST00000171158 PalldQ9ET54 1408 aa20.51■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Skint5A7XUY5 1461 aa20.51■□□□□ 0.87
Sdc1-205ENSMUST00000171158 AU022751B1B0V2 589 aa20.5■□□□□ 0.87
Sdc1-205ENSMUST00000171158 KdrP35918 1367 aa20.5■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Lrrc7Q80TE7 1490 aa20.5■□□□□ 0.87
Sdc1-205ENSMUST00000171158 Mroh1E0CZ22 1640 aa20.49■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms