RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Gnl1P36916 607 aa9.72□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 AampJ3QN89 436 aa9.72□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 TchpQ3TVW5 497 aa9.72□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Mapk8ip1Q9WVI9 707 aa9.72□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Stk3Q9JI10 497 aa9.72□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Usp48Q3V0C5 1052 aa9.72□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Secisbp2lQ6A098 1086 aaKnown RBP9.72□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Prkg1P0C605 671 aa9.72□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Hs6st3Q9QYK4 470 aa9.71□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Atp2b1G5E829 1220 aa9.71□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Hnrnpul1Q8VDM6 859 aaKnown RBP9.71□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Ppp4r3bQ922R5 820 aa9.71□□□□□ -0.85
Rc3h1-202ENSMUST00000161609 Pnmal2G3X9N3 661 aa9.71□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Atp2b3Q0VF55 1220 aa9.71□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Pabpn1Q8CCS6 302 aaKnown RBP9.71□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Ksr2Q3UVC0 959 aa9.7□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Grm1P97772 1199 aa9.7□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 GancQ8BVW0 898 aa9.7□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 SlmapQ3URD3 845 aa9.7□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Ccdc47Q9D024 483 aaKnown RBP9.7□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Sel1lQ9Z2G6 790 aa9.69□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Lemd3Q9WU40 921 aa9.69□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Nutm1Q8BHP2 1126 aa9.69□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Mcm10Q0VBD2 885 aa9.69□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Slc5a4bQ91ZP4 660 aa9.69□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Rtl1Q7M732 1744 aa9.69□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 SlkO54988 1233 aa9.69□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Nectin2P32507 530 aa9.69□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Speer4bQ9D9F7 267 aa9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Nup133Q8R0G9 1155 aa9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Cnnm1Q0GA42 951 aa9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Washc4Q3UMB9 1173 aa9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Tpm2P58774 284 aa9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Ppp4r4Q8C0Y0 875 aa9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Fam50bQ9WTJ8 334 aa9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 AU015836B2RUM3 263 aa9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 SfswapQ3USH5 945 aaKnown RBP9.68□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Dusp9Q7TNL7 452 aa9.67□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Galntl5Q9D4M9 431 aa9.67□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Map7O88735 730 aa9.67□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Igf2bp2Q5SF07 592 aaKnown RBP9.67□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Tmem87aQ8BXN9 555 aa9.67□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Tceal9Q9DD24 104 aa9.66□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Dnttip2Q8R2M2 758 aaKnown RBP9.66□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 NischQ80TM9 1593 aa9.66□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Nap1l2P51860 460 aa9.66□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Q9D5Q8 446 aa9.66□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Shroom4Q1W617 1475 aa9.65□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Gm21698A0A087WQP8 267 aa9.65□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Gm21671G3UY31 267 aa9.65□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 SetQ9EQU5 289 aaKnown RBP9.65□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Ddx11Q6AXC6 880 aa9.65□□□□□ -0.86
Rc3h1-202ENSMUST00000161609 Kcnh8P59111 1102 aa9.65□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Rbm28Q8CGC6 750 aaKnown RBP9.64□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Zmynd15Q8C0R7 736 aa9.64□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Fkbp4P30416 458 aa9.64□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Homer1Q9Z2Y3 366 aa9.64□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Gm21680A0A0G2JGR8 267 aa9.64□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Cplx1P63040 134 aa9.64□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Dnajc2P54103 621 aaKnown RBP9.63□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Rundc1Q0VDN7 615 aa9.63□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Agtpbp1Q641K1 1218 aa9.63□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Ttc19Q8CC21 365 aa9.63□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Nol7Q9D7Z3 254 aaKnown RBP9.63□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Ttll5Q8CHB8 1328 aa9.63□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Pde4bB1AWC9 736 aa9.63□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Me1P06801 572 aa9.63□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Gm21663A0A0G2JE01 267 aa9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Gm7361D3Z6R1 267 aa9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 5031410I06RikE9Q4E0 267 aa9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Gm1979E9QAN3 267 aa9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Gm5862K7N5V5 267 aa9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Gm10220K7N660 267 aa9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Lrrfip2Q91WK0 415 aa9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Sin3aQ60520 1274 aaKnown RBP9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Mrvi1Q9WUX5 899 aaKnown RBP9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Kif15Q6P9L6 1387 aa9.62□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Mphosph10Q810V0 681 aaKnown RBP9.61□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Prr29B1ARI9 187 aa9.61□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Stk31Q99MW1 1018 aa9.61□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Ak7Q9D2H2 614 aa9.61□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Cfdp1O88271 295 aaKnown RBP9.61□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Gpr162Q3UN16 588 aa9.61□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Eme2Q56A04 373 aa9.61□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Smc4Q8CG47 1286 aa9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Phactr2B1AVP0 632 aa9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Rec8Q8C5S7 591 aa9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Kif20aP97329 887 aa9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Mad1l1Q9WTX8 717 aaKnown RBP9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Triml2E9PW10 424 aa9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 ApobrQ8VBT6 942 aa9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 KnstrnQ9D9Z1 312 aaKnown RBP9.6□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Gm973E9Q295 1059 aa9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Adam1bQ8R534 806 aa9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Rai14Q9EP71 979 aaKnown RBP9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Nol8Q3UHX0 1147 aaKnown RBP9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Znf710Q3U288 666 aa9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 Map7d2A2AG50 781 aa9.59□□□□□ -0.87
Rc3h1-202ENSMUST00000161609 HnrnpuQ8VEK3 800 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms