Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Gm25239-201ENSMUST00000174915 86 ntBASIC37.13■■■■□ 3.53
Ppp4r4Q8C0Y0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Ppp4r4Q8C0Y0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Ppp4r4Q8C0Y0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Ppp4r4Q8C0Y0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ppp4r4Q8C0Y0 Gm15042-201ENSMUST00000120212 883 ntBASIC32.73■■■□□ 2.83
Ppp4r4Q8C0Y0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
Ppp4r4Q8C0Y0 Gm24109-201ENSMUST00000175489 103 ntBASIC32.02■■■□□ 2.72
Ppp4r4Q8C0Y0 Gm15045-201ENSMUST00000117359 883 ntBASIC32■■■□□ 2.71
Ppp4r4Q8C0Y0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Ppp4r4Q8C0Y0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ppp4r4Q8C0Y0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ppp4r4Q8C0Y0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ppp4r4Q8C0Y0 Gm23366-201ENSMUST00000175022 89 ntBASIC31.05■■■□□ 2.56
Ppp4r4Q8C0Y0 Psd-208ENSMUST00000224556 2034 ntBASIC31.02■■■□□ 2.56
Ppp4r4Q8C0Y0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.95■■■□□ 2.55
Ppp4r4Q8C0Y0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ppp4r4Q8C0Y0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ppp4r4Q8C0Y0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ppp4r4Q8C0Y0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Ppp4r4Q8C0Y0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ppp4r4Q8C0Y0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ppp4r4Q8C0Y0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ppp4r4Q8C0Y0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ppp4r4Q8C0Y0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ppp4r4Q8C0Y0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ppp4r4Q8C0Y0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Ppp4r4Q8C0Y0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.11■■■□□ 2.41
Ppp4r4Q8C0Y0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.1■■■□□ 2.41
Ppp4r4Q8C0Y0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ppp4r4Q8C0Y0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ppp4r4Q8C0Y0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ppp4r4Q8C0Y0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.75■■■□□ 2.35
Ppp4r4Q8C0Y0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ppp4r4Q8C0Y0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.7■■■□□ 2.35
Ppp4r4Q8C0Y0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ppp4r4Q8C0Y0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.46■■■□□ 2.31
Ppp4r4Q8C0Y0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ppp4r4Q8C0Y0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ppp4r4Q8C0Y0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ppp4r4Q8C0Y0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ppp4r4Q8C0Y0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ppp4r4Q8C0Y0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ppp4r4Q8C0Y0 Gm25238-201ENSMUST00000174914 89 ntBASIC29.2■■■□□ 2.26
Ppp4r4Q8C0Y0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ppp4r4Q8C0Y0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.18■■■□□ 2.26
Ppp4r4Q8C0Y0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.15■■■□□ 2.26
Ppp4r4Q8C0Y0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ppp4r4Q8C0Y0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.02■■■□□ 2.24
Ppp4r4Q8C0Y0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ppp4r4Q8C0Y0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ppp4r4Q8C0Y0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
Ppp4r4Q8C0Y0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ppp4r4Q8C0Y0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ppp4r4Q8C0Y0 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.72■■■□□ 2.19
Ppp4r4Q8C0Y0 Gm27325-201ENSMUST00000175467 74 ntBASIC28.68■■■□□ 2.18
Ppp4r4Q8C0Y0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.68■■■□□ 2.18
Ppp4r4Q8C0Y0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ppp4r4Q8C0Y0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ppp4r4Q8C0Y0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.58■■■□□ 2.17
Ppp4r4Q8C0Y0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.56■■■□□ 2.16
Ppp4r4Q8C0Y0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ppp4r4Q8C0Y0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ppp4r4Q8C0Y0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ppp4r4Q8C0Y0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ppp4r4Q8C0Y0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.42■■■□□ 2.14
Ppp4r4Q8C0Y0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Ppp4r4Q8C0Y0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Ppp4r4Q8C0Y0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.33■■■□□ 2.13
Ppp4r4Q8C0Y0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ppp4r4Q8C0Y0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.32■■■□□ 2.12
Ppp4r4Q8C0Y0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ppp4r4Q8C0Y0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ppp4r4Q8C0Y0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.26■■■□□ 2.11
Ppp4r4Q8C0Y0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ppp4r4Q8C0Y0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.2■■■□□ 2.1
Ppp4r4Q8C0Y0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Ppp4r4Q8C0Y0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ppp4r4Q8C0Y0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Ppp4r4Q8C0Y0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Ppp4r4Q8C0Y0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
Ppp4r4Q8C0Y0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ppp4r4Q8C0Y0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ppp4r4Q8C0Y0 Rab21-202ENSMUST00000218831 843 ntBASIC28■■■□□ 2.07
Ppp4r4Q8C0Y0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.98■■■□□ 2.07
Ppp4r4Q8C0Y0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ppp4r4Q8C0Y0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.89■■■□□ 2.06
Ppp4r4Q8C0Y0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Ppp4r4Q8C0Y0 Gm25262-201ENSMUST00000174934 133 ntBASIC27.86■■■□□ 2.05
Ppp4r4Q8C0Y0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.8■■■□□ 2.04
Ppp4r4Q8C0Y0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ppp4r4Q8C0Y0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ppp4r4Q8C0Y0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ppp4r4Q8C0Y0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ppp4r4Q8C0Y0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ppp4r4Q8C0Y0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ppp4r4Q8C0Y0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.65■■■□□ 2.02
Ppp4r4Q8C0Y0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Ppp4r4Q8C0Y0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ppp4r4Q8C0Y0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms