RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 GphnQ8BUV3 769 aaKnown RBP11.18□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Arhgef12Q8R4H2 1543 aaKnown RBP11.18□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Trim26Q99PN3 545 aa11.18□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Rock2P70336 1388 aa11.18□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Evi5lH3BKQ3 813 aa11.17□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Erich6bQ9D4S6 220 aa11.17□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Slc4a1apE9PX68 744 aa11.17□□□□□ -0.62
Col28a1-201ENSMUST00000115537 BC005561E9Q5E2 1589 aa11.17□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Dcaf11Q91VU6 549 aa11.17□□□□□ -0.62
Col28a1-201ENSMUST00000115537 VgfQ0VGU4 617 aa11.16□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Dhx9O70133 1380 aaKnown RBP11.16□□□□□ -0.62
Col28a1-201ENSMUST00000115537 HdgfP51859 237 aaKnown RBP11.16□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Puf60Q3UEB3 564 aaKnown RBP11.16□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Pcdh10E9PXQ7 1057 aa11.16□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Prex2Q3LAC4 1598 aa11.15□□□□□ -0.62
Col28a1-201ENSMUST00000115537 PtmaP26350 111 aa11.15□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Gm1043A0A140LJC2 1431 aa11.15□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Zfp444Q3TDV8 331 aaKnown RBP11.15□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Sall3Q62255 1320 aa11.15□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Tpm2P58774 284 aa11.15□□□□□ -0.62
Col28a1-201ENSMUST00000115537 Stard8Q8K031 1019 aa11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Vps8Q0P5W1 1427 aa11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Atf3Q60765 181 aa11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Neurod2Q62414 383 aa11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Fbxo2Q80UW2 297 aa11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Rbm10Q99KG3 930 aaKnown RBP11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Ttc21bQ0HA38 1315 aa11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Dusp27Q148W8 1138 aa11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Atp2b2Q9R0K7 1198 aa11.14□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Mapkbp1Q6NS57 1503 aa11.13□□□□□ -0.63
Col28a1-201ENSMUST00000115537 CenpjQ569L8 1344 aa11.13□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Ubap1lG3UW59 384 aa11.13□□□□□ -0.63
Col28a1-201ENSMUST00000115537 HnrnpmQ9D0E1 729 aaKnown RBP11.12□□□□□ -0.63
Col28a1-201ENSMUST00000115537 AI481877A2ALV5 1481 aa11.12□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Slx4Q6P1D7 1565 aa11.12□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Rapgef6Q5NCJ1 1609 aa11.12□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Tmf1B9EKI3 1091 aa11.12□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Cabp4Q8VHC5 271 aa11.12□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Kdm5bQ80Y84 1544 aa11.11□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Rpgrip1lQ8CG73 1264 aa11.11□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Caskin1Q6P9K8 1431 aa11.11□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Ccdc183A2AJB1 534 aa11.11□□□□□ -0.63
Col28a1-201ENSMUST00000115537 CrbnQ8C7D2 445 aa11.11□□□□□ -0.63
Col28a1-201ENSMUST00000115537 1700019A02RikA0A087WPV9 146 aa11.1□□□□□ -0.63
Col28a1-201ENSMUST00000115537 PtprtQ99M80 1454 aa11.1□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Naip5Q9R016 1403 aa11.1□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Kank1E9Q238 1360 aa11.09□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Ncoa1P70365 1447 aa11.09□□□□□ -0.63
Col28a1-201ENSMUST00000115537 TimelessQ9R1X4 1197 aa11.09□□□□□ -0.63
Col28a1-201ENSMUST00000115537 Fam43aQ8BUP8 424 aa11.08□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Ush1cQ9ES64 910 aa11.08□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Camsap2Q8C1B1 1461 aa11.08□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Vgll3P85442 326 aa11.08□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Myom3A2ABU4 1439 aa11.07□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Pbrm1Q8BSQ9 1634 aaKnown RBP11.07□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Znf608Q56A10 1511 aa11.07□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Pdia4P08003 638 aaKnown RBP11.07□□□□□ -0.64
Col28a1-201ENSMUST00000115537 PogkQ80TC5 607 aa11.07□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Fyb1O35601 819 aa11.07□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Chrna2Q91X60 512 aa11.07□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Naip2Q9QUK4 1447 aa11.07□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Gm21190A0A0G2JGJ6 266 aa11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Speer4f1Q9D5Q6 258 aa11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Dapk1Q80YE7 1442 aa11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Mfap1aC0HKD8 439 aaKnown RBP11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Mfap1bC0HKD9 439 aaKnown RBP11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Ppp1r9bQ6R891 817 aaKnown RBP11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Cep170Q6A065 1588 aa11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Adamts12Q811B3 1600 aa11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Becn1O88597 448 aa11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Pank3Q8R2W9 370 aa11.06□□□□□ -0.64
Col28a1-201ENSMUST00000115537 MsnP26041 577 aaKnown RBP11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Tnpo1Q8BFY9 898 aaKnown RBP11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Eif4g1Q6NZJ6 1600 aaKnown RBP11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 3425401B19RikD3Z1D3 1412 aa11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Q8BT18 775 aa11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 U2af1Q9D883 239 aaKnown RBP11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Plekhg5Q66T02 1073 aa11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Tex2Q6ZPJ0 1128 aaKnown RBP11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Inpp5dQ9ES52 1191 aa11.05□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Gsto1O09131 240 aa11.04□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Rabep1O35551 862 aa11.04□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Mcm4P49717 862 aa11.04□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Zfp91Q62511 572 aa11.04□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Senp3Q9EP97 568 aaKnown RBP11.04□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Esx1O88933 382 aa11.03□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Ptch1Q61115 1434 aa11.03□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Ssh1Q76I79 1042 aa11.03□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Q7TT23 1179 aa11.03□□□□□ -0.64
Col28a1-201ENSMUST00000115537 KarsQ99MN1 595 aaKnown RBP11.03□□□□□ -0.64
Col28a1-201ENSMUST00000115537 CatipB9EKE5 520 aa11.03□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Ddx54Q8K4L0 874 aaKnown RBP11.03□□□□□ -0.64
Col28a1-201ENSMUST00000115537 Sptbn5F6UCX4 1208 aa11.01□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Sirt1Q923E4 737 aa11.01□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Smc5Q8CG46 1101 aaKnown RBP11.01□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Erbb3Q61526 1339 aa11.01□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Map7O88735 730 aa11.01□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Isy1Q69ZQ2 285 aaKnown RBP11□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Fam184bQ0KK56 942 aa11□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Depdc5P61460 1591 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms