RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Iqcf3Q9D498 203 aa15.09■□□□□ 0.01
Vps54-202ENSMUST00000109578 Rwdd1Q9CQK7 243 aa15.08■□□□□ 0
Vps54-202ENSMUST00000109578 Rab3gap2Q8BMG7 1366 aa15.08■□□□□ 0
Vps54-202ENSMUST00000109578 Cep170Q6A065 1588 aa15.08■□□□□ 0
Vps54-202ENSMUST00000109578 Cfap74Q3UY96 1578 aa15.07■□□□□ 0
Vps54-202ENSMUST00000109578 Robo2Q7TPD3 1470 aa15.07■□□□□ 0
Vps54-202ENSMUST00000109578 Pdcd11Q6NS46 1862 aaKnown RBP15.07■□□□□ 0
Vps54-202ENSMUST00000109578 Kif3bQ61771 747 aa15.07■□□□□ 0
Vps54-202ENSMUST00000109578 Nlrp6Q91WS2 869 aa15.06■□□□□ 0
Vps54-202ENSMUST00000109578 Dcaf11Q91VU6 549 aa15.06■□□□□ 0
Vps54-202ENSMUST00000109578 Kif7B7ZNG0 1348 aa15.06■□□□□ 0
Vps54-202ENSMUST00000109578 Sbno1Q689Z5 1390 aa15.06■□□□□ 0
Vps54-202ENSMUST00000109578 Atp10dQ8K2X1 1416 aa15.06■□□□□ 0
Vps54-202ENSMUST00000109578 Abcc3B2RX12 1523 aa15.05■□□□□ 0
Vps54-202ENSMUST00000109578 Fan1Q69ZT1 1020 aa15.05■□□□□ 0
Vps54-202ENSMUST00000109578 Arid4bA2CG63 1314 aaKnown RBP15.05■□□□□ -0
Vps54-202ENSMUST00000109578 Usp54Q8BL06 1588 aaKnown RBP15.05■□□□□ -0
Vps54-202ENSMUST00000109578 Nsd2Q8BVE8 1365 aa15.04■□□□□ -0
Vps54-202ENSMUST00000109578 Cnga1P29974 684 aa15.04■□□□□ -0
Vps54-202ENSMUST00000109578 Neurl4Q5NCX5 1563 aa15.04■□□□□ -0
Vps54-202ENSMUST00000109578 Znf608Q56A10 1511 aa15.04■□□□□ -0
Vps54-202ENSMUST00000109578 Kdm2bQ6P1G2 1309 aa15.04■□□□□ -0
Vps54-202ENSMUST00000109578 Abcc6Q9R1S7 1498 aa15.04■□□□□ -0
Vps54-202ENSMUST00000109578 Gtf2e1Q9D0D5 440 aa15.03■□□□□ -0
Vps54-202ENSMUST00000109578 Chmp5Q9D7S9 219 aa15.03■□□□□ -0
Vps54-202ENSMUST00000109578 CanxP35564 591 aaKnown RBP15.02■□□□□ -0
Vps54-202ENSMUST00000109578 Ccdc30Q8BVF4 654 aa15.02■□□□□ -0
Vps54-202ENSMUST00000109578 Usp40Q8BWR4 1235 aa15.02■□□□□ -0
Vps54-202ENSMUST00000109578 ShprhQ7TPQ3 1674 aa15.02■□□□□ -0
Vps54-202ENSMUST00000109578 Mbd3Q9Z2D8 285 aaKnown RBP15.02□□□□□ -0.01
Vps54-202ENSMUST00000109578 Hsp90aa1P07901 733 aaKnown RBP15.01□□□□□ -0.01
Vps54-202ENSMUST00000109578 Plekhh1Q80TI1 1356 aa15.01□□□□□ -0.01
Vps54-202ENSMUST00000109578 Kif1bQ60575 1816 aaKnown RBP15.01□□□□□ -0.01
Vps54-202ENSMUST00000109578 Gas2l2Q5SSG4 860 aa15.01□□□□□ -0.01
Vps54-202ENSMUST00000109578 NhsB1AV60 1647 aa15.01□□□□□ -0.01
Vps54-202ENSMUST00000109578 Hdac5Q9Z2V6 1113 aa15□□□□□ -0.01
Vps54-202ENSMUST00000109578 Srpk2O54781 681 aaKnown RBP15□□□□□ -0.01
Vps54-202ENSMUST00000109578 Nkx1-2P42580 305 aa15□□□□□ -0.01
Vps54-202ENSMUST00000109578 EspnQ9ET47 871 aa15□□□□□ -0.01
Vps54-202ENSMUST00000109578 Ttc41Q692V3 1318 aa15□□□□□ -0.01
Vps54-202ENSMUST00000109578 Hecw1Q8K4P8 1604 aa15□□□□□ -0.01
Vps54-202ENSMUST00000109578 Tspyl2Q7TQI8 677 aa14.99□□□□□ -0.01
Vps54-202ENSMUST00000109578 Atf7ipQ7TT18 1306 aa14.98□□□□□ -0.01
Vps54-202ENSMUST00000109578 Abcc1O35379 1528 aa14.98□□□□□ -0.01
Vps54-202ENSMUST00000109578 Usp19Q3UJD6 1360 aa14.98□□□□□ -0.01
Vps54-202ENSMUST00000109578 Arid3cA6PWV5 409 aa14.97□□□□□ -0.01
Vps54-202ENSMUST00000109578 Golga2Q921M4 999 aa14.97□□□□□ -0.01
Vps54-202ENSMUST00000109578 DaxxO35613 739 aa14.97□□□□□ -0.01
Vps54-202ENSMUST00000109578 Ttc21bQ0HA38 1315 aa14.97□□□□□ -0.01
Vps54-202ENSMUST00000109578 Sart3Q9JLI8 962 aaKnown RBP14.97□□□□□ -0.01
Vps54-202ENSMUST00000109578 Pola1P33609 1465 aa14.96□□□□□ -0.01
Vps54-202ENSMUST00000109578 Kidins220E9Q9B7 1793 aa14.96□□□□□ -0.01
Vps54-202ENSMUST00000109578 Ylpm1Q9R0I7 1386 aaKnown RBP14.96□□□□□ -0.01
Vps54-202ENSMUST00000109578 Abca8bQ8K440 1620 aa14.95□□□□□ -0.02
Vps54-202ENSMUST00000109578 Col17a1Q07563 1470 aa14.95□□□□□ -0.02
Vps54-202ENSMUST00000109578 NudcO35685 332 aaKnown RBP14.95□□□□□ -0.02
Vps54-202ENSMUST00000109578 Clasp1Q80TV8 1535 aaKnown RBP14.94□□□□□ -0.02
Vps54-202ENSMUST00000109578 ErbinQ80TH2 1402 aa14.94□□□□□ -0.02
Vps54-202ENSMUST00000109578 Smc5Q8CG46 1101 aaKnown RBP14.94□□□□□ -0.02
Vps54-202ENSMUST00000109578 Pank1Q8K4K6 548 aa14.94□□□□□ -0.02
Vps54-202ENSMUST00000109578 4930567H17RikQ3V0K5 233 aa14.93□□□□□ -0.02
Vps54-202ENSMUST00000109578 Kiaa1107Q80TK0 1369 aa14.93□□□□□ -0.02
Vps54-202ENSMUST00000109578 Xrn1P97789 1719 aaKnown RBP14.93□□□□□ -0.02
Vps54-202ENSMUST00000109578 Atxn3Q9CVD2 355 aa14.92□□□□□ -0.02
Vps54-202ENSMUST00000109578 Uggt2E9Q4X2 1504 aa14.92□□□□□ -0.02
Vps54-202ENSMUST00000109578 Chd1P40201 1711 aa14.91□□□□□ -0.02
Vps54-202ENSMUST00000109578 Trim30dE9PWL0 497 aa14.91□□□□□ -0.02
Vps54-202ENSMUST00000109578 Polr3glQ8R0C0 218 aa14.91□□□□□ -0.02
Vps54-202ENSMUST00000109578 Kiaa1210E9Q0C6 1637 aa14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 Myo3aQ8K3H5 1613 aa14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 Dnai1Q8C0M8 701 aa14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 Lemd3Q9WU40 921 aa14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 Uspl1Q3ULM6 1089 aa14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 4933416C03RikQ3V063 378 aa14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 Puf60Q3UEB3 564 aaKnown RBP14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 Abca17E9PX95 1733 aa14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 AatkQ80YE4 1365 aa14.9□□□□□ -0.02
Vps54-202ENSMUST00000109578 Armcx1Q9CX83 456 aa14.89□□□□□ -0.03
Vps54-202ENSMUST00000109578 Trim26Q99PN3 545 aa14.89□□□□□ -0.03
Vps54-202ENSMUST00000109578 AnkarA2RT91 1465 aa14.88□□□□□ -0.03
Vps54-202ENSMUST00000109578 Itsn2Q9Z0R6 1659 aa14.88□□□□□ -0.03
Vps54-202ENSMUST00000109578 ArxO35085 564 aa14.88□□□□□ -0.03
Vps54-202ENSMUST00000109578 Eif2s2Q99L45 331 aaKnown RBP14.88□□□□□ -0.03
Vps54-202ENSMUST00000109578 P2rx7Q9Z1M0 595 aa14.88□□□□□ -0.03
Vps54-202ENSMUST00000109578 Kdm5aQ3UXZ9 1690 aa14.87□□□□□ -0.03
Vps54-202ENSMUST00000109578 Ak7Q9D2H2 614 aa14.87□□□□□ -0.03
Vps54-202ENSMUST00000109578 Myo5cE9Q1F5 1742 aa14.86□□□□□ -0.03
Vps54-202ENSMUST00000109578 Stag3O70576 1240 aa14.86□□□□□ -0.03
Vps54-202ENSMUST00000109578 Ralbp1Q62172 648 aa14.86□□□□□ -0.03
Vps54-202ENSMUST00000109578 Abca6Q8K441 1624 aa14.85□□□□□ -0.03
Vps54-202ENSMUST00000109578 Stard8Q8K031 1019 aa14.85□□□□□ -0.03
Vps54-202ENSMUST00000109578 Nos1Q9Z0J4 1429 aa14.85□□□□□ -0.03
Vps54-202ENSMUST00000109578 Nphp4P59240 1425 aa14.84□□□□□ -0.03
Vps54-202ENSMUST00000109578 Mapk8ip3Q9ESN9 1337 aa14.84□□□□□ -0.03
Vps54-202ENSMUST00000109578 Apaf1O88879 1249 aa14.84□□□□□ -0.03
Vps54-202ENSMUST00000109578 Rlbp1Q9Z275 317 aa14.84□□□□□ -0.03
Vps54-202ENSMUST00000109578 Igf1rQ60751 1373 aa14.84□□□□□ -0.03
Vps54-202ENSMUST00000109578 Ythdc2B2RR83 1445 aaKnown RBP14.83□□□□□ -0.04
Vps54-202ENSMUST00000109578 Ppm1gQ61074 542 aa14.83□□□□□ -0.04
Vps54-202ENSMUST00000109578 GsdmaQ9EST1 446 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms