RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Speer4f1Q9D5Q6 258 aa28.54■■■□□ 2.16
Trim3-202ENSMUST00000106789 Gm16486A0A1D5RMD1 1434 aa28.54■■■□□ 2.16
Trim3-202ENSMUST00000106789 Edc4Q3UJB9 1406 aaKnown RBP28.54■■■□□ 2.16
Trim3-202ENSMUST00000106789 Sart3Q9JLI8 962 aaKnown RBP28.54■■■□□ 2.16
Trim3-202ENSMUST00000106789 Neurod2Q62414 383 aa28.53■■■□□ 2.16
Trim3-202ENSMUST00000106789 Os9Q8K2C7 672 aa28.52■■■□□ 2.16
Trim3-202ENSMUST00000106789 Gtf3c3Q3TMP1 882 aa28.51■■■□□ 2.15
Trim3-202ENSMUST00000106789 Irx3P81067 507 aa28.51■■■□□ 2.15
Trim3-202ENSMUST00000106789 Map3k5O35099 1380 aa28.5■■■□□ 2.15
Trim3-202ENSMUST00000106789 NudcO35685 332 aaKnown RBP28.5■■■□□ 2.15
Trim3-202ENSMUST00000106789 Rusc2Q80U22 1514 aa28.49■■■□□ 2.15
Trim3-202ENSMUST00000106789 Tulp4Q9JIL5 1547 aa28.49■■■□□ 2.15
Trim3-202ENSMUST00000106789 Nlrp6Q91WS2 869 aa28.49■■■□□ 2.15
Trim3-202ENSMUST00000106789 Dnai1Q8C0M8 701 aa28.47■■■□□ 2.15
Trim3-202ENSMUST00000106789 Rnf17Q99MV7 1640 aa28.46■■■□□ 2.15
Trim3-202ENSMUST00000106789 AI481877A2ALV5 1481 aa28.46■■■□□ 2.15
Trim3-202ENSMUST00000106789 Sall3Q62255 1320 aa28.46■■■□□ 2.15
Trim3-202ENSMUST00000106789 Clasp1Q80TV8 1535 aaKnown RBP28.45■■■□□ 2.15
Trim3-202ENSMUST00000106789 Cep170Q6A065 1588 aa28.45■■■□□ 2.15
Trim3-202ENSMUST00000106789 Atf7ipQ7TT18 1306 aa28.45■■■□□ 2.14
Trim3-202ENSMUST00000106789 Prdm16A2A935 1275 aa28.44■■■□□ 2.14
Trim3-202ENSMUST00000106789 Ccdc30Q8BVF4 654 aa28.44■■■□□ 2.14
Trim3-202ENSMUST00000106789 Kif7B7ZNG0 1348 aa28.43■■■□□ 2.14
Trim3-202ENSMUST00000106789 Cfap74Q3UY96 1578 aa28.43■■■□□ 2.14
Trim3-202ENSMUST00000106789 Neurl4Q5NCX5 1563 aa28.42■■■□□ 2.14
Trim3-202ENSMUST00000106789 Smc5Q8CG46 1101 aaKnown RBP28.41■■■□□ 2.14
Trim3-202ENSMUST00000106789 Prdm10Q3UTQ7 1184 aa28.41■■■□□ 2.14
Trim3-202ENSMUST00000106789 Dcaf11Q91VU6 549 aa28.41■■■□□ 2.14
Trim3-202ENSMUST00000106789 Robo2Q7TPD3 1470 aa28.4■■■□□ 2.14
Trim3-202ENSMUST00000106789 Gm20521D3Z5F7 333 aa28.39■■■□□ 2.14
Trim3-202ENSMUST00000106789 Nsd2Q8BVE8 1365 aa28.39■■■□□ 2.13
Trim3-202ENSMUST00000106789 Cdc42bpbQ7TT50 1713 aa28.37■■■□□ 2.13
Trim3-202ENSMUST00000106789 Ppm1gQ61074 542 aa28.37■■■□□ 2.13
Trim3-202ENSMUST00000106789 Pdcd11Q6NS46 1862 aaKnown RBP28.36■■■□□ 2.13
Trim3-202ENSMUST00000106789 Trim30dE9PWL0 497 aa28.36■■■□□ 2.13
Trim3-202ENSMUST00000106789 Usp19Q3UJD6 1360 aa28.35■■■□□ 2.13
Trim3-202ENSMUST00000106789 Fgd6Q69ZL1 1399 aa28.35■■■□□ 2.13
Trim3-202ENSMUST00000106789 Tspyl2Q7TQI8 677 aa28.35■■■□□ 2.13
Trim3-202ENSMUST00000106789 Abcc6Q9R1S7 1498 aa28.35■■■□□ 2.13
Trim3-202ENSMUST00000106789 Mre11Q61216 706 aa28.34■■■□□ 2.13
Trim3-202ENSMUST00000106789 Gm14025A2AP89 1413 aa28.33■■■□□ 2.13
Trim3-202ENSMUST00000106789 Golga2Q921M4 999 aa28.33■■■□□ 2.13
Trim3-202ENSMUST00000106789 Mapk8ip3Q9ESN9 1337 aa28.33■■■□□ 2.13
Trim3-202ENSMUST00000106789 4930567H17RikQ3V0K5 233 aa28.33■■■□□ 2.12
Trim3-202ENSMUST00000106789 Pola1P33609 1465 aa28.32■■■□□ 2.12
Trim3-202ENSMUST00000106789 Hecw1Q8K4P8 1604 aa28.32■■■□□ 2.12
Trim3-202ENSMUST00000106789 Gtf2e1Q9D0D5 440 aa28.32■■■□□ 2.12
Trim3-202ENSMUST00000106789 Usp54Q8BL06 1588 aaKnown RBP28.3■■■□□ 2.12
Trim3-202ENSMUST00000106789 Abcc3B2RX12 1523 aa28.3■■■□□ 2.12
Trim3-202ENSMUST00000106789 Col17a1Q07563 1470 aa28.3■■■□□ 2.12
Trim3-202ENSMUST00000106789 Eif2s2Q99L45 331 aaKnown RBP28.3■■■□□ 2.12
Trim3-202ENSMUST00000106789 Ak7Q9D2H2 614 aa28.28■■■□□ 2.12
Trim3-202ENSMUST00000106789 Gas2l2Q5SSG4 860 aa28.27■■■□□ 2.12
Trim3-202ENSMUST00000106789 Stk24Q99KH8 431 aa28.27■■■□□ 2.12
Trim3-202ENSMUST00000106789 Kif1bQ60575 1816 aaKnown RBP28.27■■■□□ 2.12
Trim3-202ENSMUST00000106789 Zmym3Q9JLM4 1370 aa28.27■■■□□ 2.12
Trim3-202ENSMUST00000106789 Fan1Q69ZT1 1020 aa28.26■■■□□ 2.11
Trim3-202ENSMUST00000106789 Usp40Q8BWR4 1235 aa28.26■■■□□ 2.11
Trim3-202ENSMUST00000106789 ShprhQ7TPQ3 1674 aa28.26■■■□□ 2.11
Trim3-202ENSMUST00000106789 Pank1Q8K4K6 548 aa28.25■■■□□ 2.11
Trim3-202ENSMUST00000106789 Hsp90ab1P11499 724 aaKnown RBP28.25■■■□□ 2.11
Trim3-202ENSMUST00000106789 Ipo8Q7TMY7 1010 aa28.25■■■□□ 2.11
Trim3-202ENSMUST00000106789 Srpk2O54781 681 aaKnown RBP28.24■■■□□ 2.11
Trim3-202ENSMUST00000106789 Plcd4Q8K3R3 807 aa28.24■■■□□ 2.11
Trim3-202ENSMUST00000106789 Cnga1P29974 684 aa28.23■■■□□ 2.11
Trim3-202ENSMUST00000106789 Kif3bQ61771 747 aa28.22■■■□□ 2.11
Trim3-202ENSMUST00000106789 AnkarA2RT91 1465 aa28.22■■■□□ 2.11
Trim3-202ENSMUST00000106789 ArxO35085 564 aa28.19■■■□□ 2.1
Trim3-202ENSMUST00000106789 Ralbp1Q62172 648 aa28.19■■■□□ 2.1
Trim3-202ENSMUST00000106789 Kiaa1107Q80TK0 1369 aa28.19■■■□□ 2.1
Trim3-202ENSMUST00000106789 Itsn2Q9Z0R6 1659 aa28.19■■■□□ 2.1
Trim3-202ENSMUST00000106789 Atp10dQ8K2X1 1416 aa28.19■■■□□ 2.1
Trim3-202ENSMUST00000106789 Uspl1Q3ULM6 1089 aa28.19■■■□□ 2.1
Trim3-202ENSMUST00000106789 Ylpm1Q9R0I7 1386 aaKnown RBP28.18■■■□□ 2.1
Trim3-202ENSMUST00000106789 Ccdc183A2AJB1 534 aa28.17■■■□□ 2.1
Trim3-202ENSMUST00000106789 Kdm5aQ3UXZ9 1690 aa28.17■■■□□ 2.1
Trim3-202ENSMUST00000106789 Uggt2E9Q4X2 1504 aa28.17■■■□□ 2.1
Trim3-202ENSMUST00000106789 NhsB1AV60 1647 aa28.16■■■□□ 2.1
Trim3-202ENSMUST00000106789 Polr3glQ8R0C0 218 aa28.15■■■□□ 2.1
Trim3-202ENSMUST00000106789 Armcx1Q9CX83 456 aa28.15■■■□□ 2.1
Trim3-202ENSMUST00000106789 Abcc1O35379 1528 aa28.14■■■□□ 2.1
Trim3-202ENSMUST00000106789 ErbinQ80TH2 1402 aa28.13■■■□□ 2.09
Trim3-202ENSMUST00000106789 Amer1Q7TS75 1132 aa28.13■■■□□ 2.09
Trim3-202ENSMUST00000106789 Atxn3Q9CVD2 355 aa28.13■■■□□ 2.09
Trim3-202ENSMUST00000106789 Stard8Q8K031 1019 aa28.11■■■□□ 2.09
Trim3-202ENSMUST00000106789 Ttc21bQ0HA38 1315 aa28.1■■■□□ 2.09
Trim3-202ENSMUST00000106789 Rlbp1Q9Z275 317 aa28.1■■■□□ 2.09
Trim3-202ENSMUST00000106789 Trim58Q5NCC9 485 aa28.09■■■□□ 2.09
Trim3-202ENSMUST00000106789 Kiaa1210E9Q0C6 1637 aa28.08■■■□□ 2.09
Trim3-202ENSMUST00000106789 Ppp1r9bQ6R891 817 aaKnown RBP28.08■■■□□ 2.09
Trim3-202ENSMUST00000106789 Kidins220E9Q9B7 1793 aa28.08■■■□□ 2.08
Trim3-202ENSMUST00000106789 Abca8bQ8K440 1620 aa28.07■■■□□ 2.08
Trim3-202ENSMUST00000106789 Abca17E9PX95 1733 aa28.07■■■□□ 2.08
Trim3-202ENSMUST00000106789 Duxf3A0A0N4SV92 674 aa28.07■■■□□ 2.08
Trim3-202ENSMUST00000106789 Trim26Q99PN3 545 aa28.07■■■□□ 2.08
Trim3-202ENSMUST00000106789 Xrn1P97789 1719 aaKnown RBP28.06■■■□□ 2.08
Trim3-202ENSMUST00000106789 Myo3aQ8K3H5 1613 aa28.05■■■□□ 2.08
Trim3-202ENSMUST00000106789 Znf608Q56A10 1511 aa28.04■■■□□ 2.08
Trim3-202ENSMUST00000106789 Znf521Q6KAS7 1311 aa28.04■■■□□ 2.08
Trim3-202ENSMUST00000106789 Gm6268A2A3U9 297 aa28.04■■■□□ 2.08
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms