RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ccdc9Q8VC31 543 aaKnown RBP19.73■□□□□ 0.75
Nup54-201ENSMUST00000038514 Usp54Q8BL06 1588 aaKnown RBP19.73■□□□□ 0.75
Nup54-201ENSMUST00000038514 Rab3gap2Q8BMG7 1366 aa19.72■□□□□ 0.75
Nup54-201ENSMUST00000038514 AnkarA2RT91 1465 aa19.72■□□□□ 0.75
Nup54-201ENSMUST00000038514 Pde4cQ3UEI1 686 aa19.72■□□□□ 0.75
Nup54-201ENSMUST00000038514 Atf7ipQ7TT18 1306 aa19.72■□□□□ 0.75
Nup54-201ENSMUST00000038514 Gm14025A2AP89 1413 aa19.71■□□□□ 0.75
Nup54-201ENSMUST00000038514 Uggt2E9Q4X2 1504 aa19.7■□□□□ 0.74
Nup54-201ENSMUST00000038514 Prdm16A2A935 1275 aa19.7■□□□□ 0.74
Nup54-201ENSMUST00000038514 CrbnQ8C7D2 445 aa19.7■□□□□ 0.74
Nup54-201ENSMUST00000038514 Abcc6Q9R1S7 1498 aa19.7■□□□□ 0.74
Nup54-201ENSMUST00000038514 Plekhh1Q80TI1 1356 aa19.7■□□□□ 0.74
Nup54-201ENSMUST00000038514 Mroh3A0A1D5RM54 893 aa19.7■□□□□ 0.74
Nup54-201ENSMUST00000038514 Slc4a1apE9PX68 744 aa19.69■□□□□ 0.74
Nup54-201ENSMUST00000038514 Fgd6Q69ZL1 1399 aa19.69■□□□□ 0.74
Nup54-201ENSMUST00000038514 Zmym3Q9JLM4 1370 aa19.69■□□□□ 0.74
Nup54-201ENSMUST00000038514 Nkx1-2P42580 305 aa19.68■□□□□ 0.74
Nup54-201ENSMUST00000038514 Nsd2Q8BVE8 1365 aa19.67■□□□□ 0.74
Nup54-201ENSMUST00000038514 Abca8bQ8K440 1620 aa19.67■□□□□ 0.74
Nup54-201ENSMUST00000038514 Xrn1P97789 1719 aaKnown RBP19.67■□□□□ 0.74
Nup54-201ENSMUST00000038514 Col17a1Q07563 1470 aa19.67■□□□□ 0.74
Nup54-201ENSMUST00000038514 Fam184bQ0KK56 942 aa19.66■□□□□ 0.74
Nup54-201ENSMUST00000038514 Hdac5Q9Z2V6 1113 aa19.66■□□□□ 0.74
Nup54-201ENSMUST00000038514 Srcin1Q9QWI6 1250 aa19.66■□□□□ 0.74
Nup54-201ENSMUST00000038514 Kidins220E9Q9B7 1793 aa19.66■□□□□ 0.74
Nup54-201ENSMUST00000038514 Abcc1O35379 1528 aa19.65■□□□□ 0.74
Nup54-201ENSMUST00000038514 Kdm5aQ3UXZ9 1690 aa19.65■□□□□ 0.74
Nup54-201ENSMUST00000038514 B4galnt3Q6L8S8 986 aa19.64■□□□□ 0.74
Nup54-201ENSMUST00000038514 Rwdd1Q9CQK7 243 aa19.64■□□□□ 0.74
Nup54-201ENSMUST00000038514 Map3k5O35099 1380 aa19.63■□□□□ 0.73
Nup54-201ENSMUST00000038514 Myo5cE9Q1F5 1742 aa19.63■□□□□ 0.73
Nup54-201ENSMUST00000038514 Usp19Q3UJD6 1360 aa19.62■□□□□ 0.73
Nup54-201ENSMUST00000038514 Cep152A2AUM9 1736 aaKnown RBP19.62■□□□□ 0.73
Nup54-201ENSMUST00000038514 EspnQ9ET47 871 aa19.62■□□□□ 0.73
Nup54-201ENSMUST00000038514 Chd1P40201 1711 aa19.59■□□□□ 0.73
Nup54-201ENSMUST00000038514 CanxP35564 591 aaKnown RBP19.58■□□□□ 0.72
Nup54-201ENSMUST00000038514 Myom1Q62234 1667 aaKnown RBP19.57■□□□□ 0.72
Nup54-201ENSMUST00000038514 Atp10dQ8K2X1 1416 aa19.56■□□□□ 0.72
Nup54-201ENSMUST00000038514 Sall3Q62255 1320 aa19.56■□□□□ 0.72
Nup54-201ENSMUST00000038514 Kdm2aP59997 1161 aa19.56■□□□□ 0.72
Nup54-201ENSMUST00000038514 Smc5Q8CG46 1101 aaKnown RBP19.56■□□□□ 0.72
Nup54-201ENSMUST00000038514 Kif7B7ZNG0 1348 aa19.55■□□□□ 0.72
Nup54-201ENSMUST00000038514 NudcO35685 332 aaKnown RBP19.55■□□□□ 0.72
Nup54-201ENSMUST00000038514 Dbr1Q923B1 550 aa19.55■□□□□ 0.72
Nup54-201ENSMUST00000038514 Ylpm1Q9R0I7 1386 aaKnown RBP19.55■□□□□ 0.72
Nup54-201ENSMUST00000038514 Speer4f1Q9D5Q6 258 aa19.55■□□□□ 0.72
Nup54-201ENSMUST00000038514 Erich6D3Z6S9 713 aa19.54■□□□□ 0.72
Nup54-201ENSMUST00000038514 Ccdc30Q8BVF4 654 aa19.54■□□□□ 0.72
Nup54-201ENSMUST00000038514 Chmp5Q9D7S9 219 aa19.54■□□□□ 0.72
Nup54-201ENSMUST00000038514 Tmem131lQ3U3D7 1597 aa19.53■□□□□ 0.72
Nup54-201ENSMUST00000038514 Fndc1E9Q043 1732 aa19.53■□□□□ 0.72
Nup54-201ENSMUST00000038514 Cdk5rap2Q8K389 1822 aa19.53■□□□□ 0.72
Nup54-201ENSMUST00000038514 Sart3Q9JLI8 962 aaKnown RBP19.52■□□□□ 0.72
Nup54-201ENSMUST00000038514 Apbb1Q9QXJ1 710 aa19.52■□□□□ 0.72
Nup54-201ENSMUST00000038514 Iqgap3F8VQ29 1632 aa19.51■□□□□ 0.71
Nup54-201ENSMUST00000038514 Abca8aQ8K442 1620 aa19.5■□□□□ 0.71
Nup54-201ENSMUST00000038514 Dnai1Q8C0M8 701 aa19.5■□□□□ 0.71
Nup54-201ENSMUST00000038514 Zfyve16Q80U44 1528 aa19.5■□□□□ 0.71
Nup54-201ENSMUST00000038514 Mapk8ip3Q9ESN9 1337 aa19.5■□□□□ 0.71
Nup54-201ENSMUST00000038514 Myo3aQ8K3H5 1613 aa19.49■□□□□ 0.71
Nup54-201ENSMUST00000038514 Irx3P81067 507 aa19.49■□□□□ 0.71
Nup54-201ENSMUST00000038514 Gtf3c3Q3TMP1 882 aa19.49■□□□□ 0.71
Nup54-201ENSMUST00000038514 DaxxO35613 739 aa19.48■□□□□ 0.71
Nup54-201ENSMUST00000038514 Nphp4P59240 1425 aa19.48■□□□□ 0.71
Nup54-201ENSMUST00000038514 Abca6Q8K441 1624 aa19.48■□□□□ 0.71
Nup54-201ENSMUST00000038514 Nlrp6Q91WS2 869 aa19.48■□□□□ 0.71
Nup54-201ENSMUST00000038514 Rims1Q99NE5 1463 aa19.48■□□□□ 0.71
Nup54-201ENSMUST00000038514 Kiaa1107Q80TK0 1369 aa19.47■□□□□ 0.71
Nup54-201ENSMUST00000038514 Mre11Q61216 706 aa19.47■□□□□ 0.71
Nup54-201ENSMUST00000038514 Neurod2Q62414 383 aa19.47■□□□□ 0.71
Nup54-201ENSMUST00000038514 Dcaf11Q91VU6 549 aa19.47■□□□□ 0.71
Nup54-201ENSMUST00000038514 Talpid3E9PV87 1520 aa19.47■□□□□ 0.71
Nup54-201ENSMUST00000038514 Gm20521D3Z5F7 333 aa19.47■□□□□ 0.71
Nup54-201ENSMUST00000038514 Gtf2e1Q9D0D5 440 aa19.47■□□□□ 0.71
Nup54-201ENSMUST00000038514 Sipa1l1Q8C0T5 1782 aa19.46■□□□□ 0.71
Nup54-201ENSMUST00000038514 Znf608Q56A10 1511 aa19.46■□□□□ 0.71
Nup54-201ENSMUST00000038514 DnmbpQ6TXD4 1580 aa19.46■□□□□ 0.71
Nup54-201ENSMUST00000038514 Ppm1gQ61074 542 aa19.45■□□□□ 0.7
Nup54-201ENSMUST00000038514 Os9Q8K2C7 672 aa19.44■□□□□ 0.7
Nup54-201ENSMUST00000038514 Gprasp1Q5U4C1 1347 aa19.44■□□□□ 0.7
Nup54-201ENSMUST00000038514 ErbinQ80TH2 1402 aa19.44■□□□□ 0.7
Nup54-201ENSMUST00000038514 Trpm1Q2TV84 1622 aa19.44■□□□□ 0.7
Nup54-201ENSMUST00000038514 Stard8Q8K031 1019 aa19.44■□□□□ 0.7
Nup54-201ENSMUST00000038514 Nos1Q9Z0J4 1429 aa19.44■□□□□ 0.7
Nup54-201ENSMUST00000038514 Myom2Q14BI5 1463 aa19.43■□□□□ 0.7
Nup54-201ENSMUST00000038514 Golga2Q921M4 999 aa19.43■□□□□ 0.7
Nup54-201ENSMUST00000038514 Uspl1Q3ULM6 1089 aa19.43■□□□□ 0.7
Nup54-201ENSMUST00000038514 Tspyl2Q7TQI8 677 aa19.43■□□□□ 0.7
Nup54-201ENSMUST00000038514 Ehbp1l1Q99MS7 1716 aa19.43■□□□□ 0.7
Nup54-201ENSMUST00000038514 Ralbp1Q62172 648 aa19.42■□□□□ 0.7
Nup54-201ENSMUST00000038514 Usp40Q8BWR4 1235 aa19.42■□□□□ 0.7
Nup54-201ENSMUST00000038514 4933416C03RikQ3V063 378 aa19.42■□□□□ 0.7
Nup54-201ENSMUST00000038514 Ttc21bQ0HA38 1315 aa19.41■□□□□ 0.7
Nup54-201ENSMUST00000038514 Znf521Q6KAS7 1311 aa19.41■□□□□ 0.7
Nup54-201ENSMUST00000038514 Prdm2A2A7B5 1709 aaKnown RBP19.4■□□□□ 0.7
Nup54-201ENSMUST00000038514 Gas2l2Q5SSG4 860 aa19.4■□□□□ 0.7
Nup54-201ENSMUST00000038514 Abca9Q8K449 1623 aa19.4■□□□□ 0.7
Nup54-201ENSMUST00000038514 Adgrb3Q80ZF8 1522 aa19.39■□□□□ 0.69
Nup54-201ENSMUST00000038514 Iqsec2Q5DU25 1478 aa19.39■□□□□ 0.69
Nup54-201ENSMUST00000038514 Kif3bQ61771 747 aa19.39■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms