RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 R3hcc1Q8BSI6 488 aa5.67□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Kif21bQ9QXL1 1668 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Znf710Q3U288 666 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Sart3Q9JLI8 962 aaKnown RBP5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Fmn2Q9JL04 1578 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Cgnl1Q6AW69 1298 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Erich6bQ9D4S6 220 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 ErbinQ80TH2 1402 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Plch2A2AP18 1501 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Neo1P97798 1493 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Atp6v1dP57746 247 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Fez2Q6TYB5 348 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 FanciQ8K368 1330 aa5.66□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Gm45140A0A0N4SUM8 220 aa5.65□□□□□ -1.5
Prkdc-201ENSMUST00000023352 PnisrA2AJT4 805 aaKnown RBP5.65□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Cwc15Q9JHS9 229 aaKnown RBP5.65□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Magi3Q9EQJ9 1476 aa5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Prex2Q3LAC4 1598 aa5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Ncbp3Q8BZR9 615 aaKnown RBP5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 CenpjQ569L8 1344 aa5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Eif2ak4Q9QZ05 1648 aa5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Gm20521D3Z5F7 333 aa5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Tpm3P21107 285 aaKnown RBP5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Gtf2e1Q9D0D5 440 aa5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Slc52a2Q9D8F3 450 aa5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Exosc9Q9JHI7 438 aaKnown RBP5.65□□□□□ -1.51
Prkdc-201ENSMUST00000023352 DmtnQ9WV69 405 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Dhx8A2A4P0 1244 aaKnown RBP5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Prkrip1Q9CWV6 186 aaKnown RBP5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 SphkapQ6NSW3 1687 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Tdrd9Q14BI7 1383 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Lrrc9Q8CDN9 1456 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Smarce1O54941 411 aaKnown RBP5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Kif16bB1AVY7 1312 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 AI481877A2ALV5 1481 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 BC005561E9Q5E2 1589 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Kif14L0N7N1 1674 aaKnown RBP5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Kdm5bQ80Y84 1544 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Hmgb2P30681 210 aaKnown RBP5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Pdcl2Q78Y63 240 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Rusc2Q80U22 1514 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Kiaa1210E9Q0C6 1637 aa5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Sart1Q9Z315 806 aaKnown RBP5.64□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Trim30aP15533 496 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Plcd4Q8K3R3 807 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Atl3Q91YH5 541 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Mink1Q9JM52 1308 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 A0A1L1SQF0 893 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Disp1Q3TDN0 1521 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Mast1Q9R1L5 1570 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Shroom2A2ALU4 1481 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Nolc1E9Q5C9 702 aaKnown RBP5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Golga2Q921M4 999 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Atf7ipQ7TT18 1306 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Taf3Q5HZG4 932 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 WizO88286 1684 aaKnown RBP5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Ccdc171E9Q1U1 1324 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 EzrP26040 586 aaKnown RBP5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Exoc6Q8R313 802 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Trim26Q99PN3 545 aa5.63□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Fam184bQ0KK56 942 aa5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Zbtb7cQ8VCZ7 619 aa5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Hsp90b1P08113 802 aaKnown RBP5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Sos1Q62245 1319 aa5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Kiaa1551Q5DTW7 1521 aa5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Fez1Q8K0X8 392 aa5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Kdm2bQ6P1G2 1309 aa5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Talpid3E9PV87 1520 aa5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Hs1bp3Q3TC93 395 aa5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Ccar1Q8CH18 1146 aaKnown RBP5.62□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Stag3O70576 1240 aa5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Pprc1Q6NZN1 1644 aa5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Ddx11Q6AXC6 880 aa5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Map3k4O08648 1597 aa5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Mrvi1Q9WUX5 899 aaKnown RBP5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Ifit1bl1D3Z6F0 470 aa5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Hap1O35668 628 aa5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Zscan10Q3URR7 782 aa5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Gapvd1Q6PAR5 1458 aa5.61□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Tmc1Q8R4P5 757 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Rnf17Q99MV7 1640 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Ppm1eQ80TL0 749 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Naip6Q9JIB6 1403 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 TimelessQ9R1X4 1197 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Nol10Q5RJG1 687 aaKnown RBP5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Anp32eP97822 260 aaKnown RBP5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Dusp27Q148W8 1138 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Ttc41Q692V3 1318 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Taok2Q6ZQ29 1240 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Grwd1Q810D6 446 aaKnown RBP5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Setbp1Q9Z180 1582 aa5.6□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Cdk13Q69ZA1 1511 aaKnown RBP5.59□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Abcc2Q8VI47 1543 aa5.59□□□□□ -1.51
Prkdc-201ENSMUST00000023352 NcapgE9PWG6 1004 aa5.59□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Ccdc47Q9D024 483 aaKnown RBP5.59□□□□□ -1.51
Prkdc-201ENSMUST00000023352 NinlQ6ZQ12 1394 aa5.59□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Setd1aE9PYH6 1716 aa5.59□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Mcm2P97310 904 aa5.59□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Adcy10Q8C0T9 1614 aa5.59□□□□□ -1.51
Prkdc-201ENSMUST00000023352 Trappc8E9PWG2 1437 aa5.59□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms