RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	SBH2	P52871	88 aa		4.19	□□□□□ -1.74
snR19	snR19	SYF2	P53277	215 aa	Predicted RBP	4.19	□□□□□ -1.74
snR19	snR19	GPI15	P53961	229 aa		4.19	□□□□□ -1.74
snR19	snR19	VPS28	Q02767	242 aa		4.19	□□□□□ -1.74
snR19	snR19	CGI121	Q03705	181 aa	Known RBP	4.19	□□□□□ -1.74
snR19	snR19	YMR315W	Q04869	349 aa	Known RBP	4.19	□□□□□ -1.74
snR19	snR19	GPI11	Q06636	219 aa		4.19	□□□□□ -1.74
snR19	snR19	IPK1	Q06667	281 aa		4.19	□□□□□ -1.74
snR19	snR19	PEX11	Q12462	236 aa		4.19	□□□□□ -1.74
snR19	snR19	FRE6	Q12473	712 aa		4.19	□□□□□ -1.74
snR19	snR19	SFG1	Q12507	346 aa		4.19	□□□□□ -1.74
snR19	snR19	SLO1	Q3E784	85 aa		4.19	□□□□□ -1.74
snR19	snR19	YLR099W-A	Q3E798	87 aa		4.19	□□□□□ -1.74
snR19	snR19	PHO2	P07269	559 aa		4.18	□□□□□ -1.74
snR19	snR19	LSB5	P25369	354 aa		4.18	□□□□□ -1.74
snR19	snR19	LDB16	P25587	256 aa		4.18	□□□□□ -1.74
snR19	snR19	FRE2	P36033	711 aa		4.18	□□□□□ -1.74
snR19	snR19	PMU1	P36069	295 aa		4.18	□□□□□ -1.74
snR19	snR19	GCV3	P39726	170 aa	Predicted RBP	4.18	□□□□□ -1.74
snR19	snR19	GDI1	P39958	451 aa	Known RBP	4.18	□□□□□ -1.74
snR19	snR19	ISC1	P40015	477 aa	Known RBP	4.18	□□□□□ -1.74
snR19	snR19	YER188W	P40103	239 aa		4.18	□□□□□ -1.74
snR19	snR19	YJL068C	P40363	299 aa		4.18	□□□□□ -1.74
snR19	snR19	BMT5	P40493	336 aa		4.18	□□□□□ -1.74
snR19	snR19	TAD2	P47058	250 aa		4.18	□□□□□ -1.74
snR19	snR19	PET130	P47065	347 aa		4.18	□□□□□ -1.74
snR19	snR19	GPI14	P47088	403 aa	Known RBP	4.18	□□□□□ -1.74
snR19	snR19	MPC1	P53157	130 aa	Known RBP	4.18	□□□□□ -1.74
snR19	snR19	FMP41	P53889	259 aa	Known RBP	4.18	□□□□□ -1.74
snR19	snR19	YPL067C	Q02754	198 aa		4.18	□□□□□ -1.74
snR19	snR19	YMR155W	Q03795	547 aa		4.18	□□□□□ -1.74
snR19	snR19	YDR222W	Q04925	415 aa		4.18	□□□□□ -1.74
snR19	snR19	ERP1	Q05359	219 aa	Known RBP	4.18	□□□□□ -1.74
snR19	snR19	TMS1	Q12116	473 aa		4.18	□□□□□ -1.74
snR19	snR19	PST1	Q12355	444 aa		4.18	□□□□□ -1.74
snR19	snR19	YLR361C-A	Q3E795	98 aa		4.18	□□□□□ -1.74
snR19	snR19	YIL134C-A	Q45U18	67 aa		4.18	□□□□□ -1.74
snR19	snR19	COX2	P00410	251 aa		4.17	□□□□□ -1.74
snR19	snR19	TIR1	P10863	254 aa		4.17	□□□□□ -1.74
snR19	snR19	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
snR19	snR19	RPB5	P20434	215 aa		4.17	□□□□□ -1.74
snR19	snR19	PUT3	P25502	979 aa	Predicted RBP	4.17	□□□□□ -1.74
snR19	snR19	KKQ8	P36004	724 aa		4.17	□□□□□ -1.74
snR19	snR19	RIB1	P38066	345 aa		4.17	□□□□□ -1.74
snR19	snR19	BNA4	P38169	460 aa		4.17	□□□□□ -1.74
snR19	snR19	YHL044W	P38727	235 aa		4.17	□□□□□ -1.74
snR19	snR19	LSM5	P40089	93 aa	Known RBP	4.17	□□□□□ -1.74
snR19	snR19	FLX1	P40464	311 aa		4.17	□□□□□ -1.74
snR19	snR19	YIL012W	P40551	113 aa		4.17	□□□□□ -1.74
snR19	snR19	SYS1	P41544	203 aa		4.17	□□□□□ -1.74
snR19	snR19	OST3	P48439	350 aa		4.17	□□□□□ -1.74
snR19	snR19	PHB2	P50085	310 aa		4.17	□□□□□ -1.74
snR19	snR19	YNL184C	P53876	108 aa		4.17	□□□□□ -1.74
snR19	snR19	ELC1	Q03071	99 aa		4.17	□□□□□ -1.74
snR19	snR19	YMR209C	Q03648	457 aa		4.17	□□□□□ -1.74
snR19	snR19	PKR1	Q03880	122 aa	Known RBP	4.17	□□□□□ -1.74
snR19	snR19	YMR087W	Q04299	284 aa		4.17	□□□□□ -1.74
snR19	snR19	GMC1	Q04399	608 aa		4.17	□□□□□ -1.74
snR19	snR19	YMR317W	Q04893	1140 aa		4.17	□□□□□ -1.74
snR19	snR19	RRP45	Q05636	305 aa	Known RBP	4.17	□□□□□ -1.74
snR19	snR19	THP1	Q08231	455 aa		4.17	□□□□□ -1.74
snR19	snR19	PAR32	Q12515	295 aa	Known RBP	4.17	□□□□□ -1.74
snR19	snR19	RPL13A	Q12690	199 aa	Predicted RBP	4.17	□□□□□ -1.74
snR19	snR19	SEC16	P48415	2195 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	THP2	O13539	261 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	TDH2	P00358	332 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
snR19	snR19	MSW1	P04803	379 aa		4.16	□□□□□ -1.74
snR19	snR19	PUT1	P09368	476 aa		4.16	□□□□□ -1.74
snR19	snR19	RPL27A	P0C2H6	136 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	RPL27B	P0C2H7	136 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	YOL163W	P0CF20	169 aa		4.16	□□□□□ -1.74
snR19	snR19	SCL1	P21243	252 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	STP22	P25604	385 aa		4.16	□□□□□ -1.74
snR19	snR19	MSK1	P32048	576 aa		4.16	□□□□□ -1.74
snR19	snR19	UPS2	P35200	230 aa		4.16	□□□□□ -1.74
snR19	snR19	PRP39	P39682	629 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	PRE6	P40303	254 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	ATG18	P43601	500 aa		4.16	□□□□□ -1.74
snR19	snR19	SDT1	P53078	280 aa		4.16	□□□□□ -1.74
snR19	snR19	ACT1	P60010	375 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	UPS3	Q04006	179 aa		4.16	□□□□□ -1.74
snR19	snR19	CNL1	Q06333	122 aa		4.16	□□□□□ -1.74
snR19	snR19	MRPL35	Q06678	367 aa		4.16	□□□□□ -1.74
snR19	snR19	PAU23	Q07987	124 aa		4.16	□□□□□ -1.74
snR19	snR19	YOL131W	Q08270	108 aa		4.16	□□□□□ -1.74
snR19	snR19	GRE1	Q08969	168 aa		4.16	□□□□□ -1.74
snR19	snR19	FSF1	Q12029	327 aa	Known RBP	4.16	□□□□□ -1.74
snR19	snR19	YLR118C	Q12354	227 aa		4.16	□□□□□ -1.74
snR19	snR19	PAU17	Q12370	124 aa		4.16	□□□□□ -1.74
snR19	snR19	ISA2	Q12425	185 aa		4.16	□□□□□ -1.74
snR19	snR19	EAF3	Q12432	401 aa		4.16	□□□□□ -1.74
snR19	snR19	HIS1	P00498	297 aa	Known RBP	4.15	□□□□□ -1.75
snR19	snR19	YKR104W	P0CE69	306 aa		4.15	□□□□□ -1.75
snR19	snR19	MRS3	P10566	314 aa		4.15	□□□□□ -1.75
snR19	snR19	AMD1	P15274	810 aa	Known RBP	4.15	□□□□□ -1.75
snR19	snR19	SEC22	P22214	214 aa		4.15	□□□□□ -1.75
snR19	snR19	PBN1	P25580	416 aa		4.15	□□□□□ -1.75
snR19	snR19	MSN2	P33748	704 aa		4.15	□□□□□ -1.75
snR19	snR19	TMA19	P35691	167 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms