RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YER188WP40103 239 aa2.06□□□□□ -2.08
RPC40YPR110C YMR144WP40214 342 aaKnown RBP2.06□□□□□ -2.08
RPC40YPR110C RAD17P48581 401 aa2.06□□□□□ -2.08
RPC40YPR110C RMR1P53060 241 aa2.06□□□□□ -2.08
RPC40YPR110C SSU72P53538 206 aaPredicted RBP2.06□□□□□ -2.08
RPC40YPR110C GRH1Q04410 372 aaKnown RBP2.06□□□□□ -2.08
RPC40YPR110C YLR179CQ06252 201 aaKnown RBP2.06□□□□□ -2.08
RPC40YPR110C SAS5Q99314 248 aa2.06□□□□□ -2.08
RPC40YPR110C MATALPHA2P0CY08 210 aa2.05□□□□□ -2.08
RPC40YPR110C HMLALPHA2P0CY09 210 aa2.05□□□□□ -2.08
RPC40YPR110C MAK31P23059 88 aa2.05□□□□□ -2.08
RPC40YPR110C ERG24P32462 438 aaKnown RBP2.05□□□□□ -2.08
RPC40YPR110C PRX1P34227 261 aaKnown RBP2.05□□□□□ -2.08
RPC40YPR110C YGP1P38616 354 aaKnown RBP2.05□□□□□ -2.08
RPC40YPR110C MRPL49P40858 161 aaPredicted RBP2.05□□□□□ -2.08
RPC40YPR110C YRB1P41920 201 aaKnown RBP2.05□□□□□ -2.08
RPC40YPR110C HAM1P47119 197 aaKnown RBP2.05□□□□□ -2.08
RPC40YPR110C ILM1P47155 203 aa2.05□□□□□ -2.08
RPC40YPR110C YGL159WP53110 370 aa2.05□□□□□ -2.08
RPC40YPR110C TOS8P53147 276 aa2.05□□□□□ -2.08
RPC40YPR110C GTR2P53290 341 aa2.05□□□□□ -2.08
RPC40YPR110C PGA2P53903 129 aa2.05□□□□□ -2.08
RPC40YPR110C YLR030WQ07967 263 aa2.05□□□□□ -2.08
RPC40YPR110C VPS68Q12016 184 aa2.05□□□□□ -2.08
RPC40YPR110C TPO4Q12256 659 aa2.05□□□□□ -2.08
RPC40YPR110C ADF1Q2V2Q1 113 aa2.05□□□□□ -2.08
RPC40YPR110C NHP6BP11633 99 aaKnown RBP2.04□□□□□ -2.08
RPC40YPR110C YMR31P19955 123 aa2.04□□□□□ -2.08
RPC40YPR110C SCO1P23833 295 aa2.04□□□□□ -2.08
RPC40YPR110C RAD51P25454 400 aa2.04□□□□□ -2.08
RPC40YPR110C SCM4P32564 187 aa2.04□□□□□ -2.08
RPC40YPR110C SSO1P32867 290 aa2.04□□□□□ -2.08
RPC40YPR110C MSA2P36157 363 aa2.04□□□□□ -2.08
RPC40YPR110C YHL026CP38740 315 aa2.04□□□□□ -2.08
RPC40YPR110C RTC3P38804 111 aaPredicted RBP2.04□□□□□ -2.08
RPC40YPR110C ARC15P40518 154 aaRIP-Chip data2.04□□□□□ -2.08not detected
RPC40YPR110C YJR146WP47174 117 aa2.04□□□□□ -2.08
RPC40YPR110C TRM9P49957 279 aa2.04□□□□□ -2.08
RPC40YPR110C NSA1P53136 463 aaPredicted RBP2.04□□□□□ -2.08
RPC40YPR110C DID2P69771 204 aa2.04□□□□□ -2.08
RPC40YPR110C YMR279CQ03263 540 aa2.04□□□□□ -2.08
RPC40YPR110C MSA1Q08471 629 aa2.04□□□□□ -2.08
RPC40YPR110C YPL257WQ08974 193 aa2.04□□□□□ -2.08
RPC40YPR110C BBP1Q12365 385 aa2.04□□□□□ -2.08
RPC40YPR110C GIS3Q12418 502 aa2.04□□□□□ -2.08
RPC40YPR110C TUS1Q06412 1307 aa2.03□□□□□ -2.08
RPC40YPR110C COX5AP00424 153 aa2.03□□□□□ -2.08
RPC40YPR110C IPP1P00817 287 aaKnown RBP2.03□□□□□ -2.08
RPC40YPR110C Q0255P03881 472 aa2.03□□□□□ -2.08
RPC40YPR110C YBR121C-AP0C5L4 52 aa2.03□□□□□ -2.08
RPC40YPR110C RIB1P38066 345 aa2.03□□□□□ -2.08
RPC40YPR110C MIC12P38341 106 aa2.03□□□□□ -2.08
RPC40YPR110C RPF1P38805 295 aaKnown RBP2.03□□□□□ -2.08
RPC40YPR110C YHR125WP38831 101 aa2.03□□□□□ -2.08
RPC40YPR110C PEX17P40155 199 aa2.03□□□□□ -2.08
RPC40YPR110C HYR1P40581 163 aaKnown RBP2.03□□□□□ -2.08
RPC40YPR110C RPA43P46669 326 aa2.03□□□□□ -2.08
RPC40YPR110C COS6P53344 381 aa2.03□□□□□ -2.08
RPC40YPR110C MIX17Q03667 156 aa2.03□□□□□ -2.08
RPC40YPR110C ATG38Q05789 226 aaKnown RBP2.03□□□□□ -2.08
RPC40YPR110C CDC123Q05791 360 aa2.03□□□□□ -2.08
RPC40YPR110C YKL183C-AQ3E765 70 aa2.03□□□□□ -2.08
RPC40YPR110C HTL1Q9URQ5 78 aa2.03□□□□□ -2.08
RPC40YPR110C ECM29P38737 1868 aa2.03□□□□□ -2.09
RPC40YPR110C YHR139C-AO13536 103 aa2.02□□□□□ -2.09
RPC40YPR110C MER1P16523 270 aa2.02□□□□□ -2.09
RPC40YPR110C RPB4P20433 221 aaPredicted RBP2.02□□□□□ -2.09
RPC40YPR110C YPT52P36018 234 aaKnown RBP2.02□□□□□ -2.09
RPC40YPR110C PHO88P38264 188 aaPredicted RBP2.02□□□□□ -2.09
RPC40YPR110C RSM25P40496 264 aa2.02□□□□□ -2.09
RPC40YPR110C CAT5P41735 233 aa2.02□□□□□ -2.09
RPC40YPR110C SMD3P43321 101 aaKnown RBP2.02□□□□□ -2.09
RPC40YPR110C YJR056CP47115 236 aa2.02□□□□□ -2.09
RPC40YPR110C BRR6P53062 197 aa2.02□□□□□ -2.09
RPC40YPR110C FYV6P53913 173 aa2.02□□□□□ -2.09
RPC40YPR110C YML108WQ03759 105 aa2.02□□□□□ -2.09
RPC40YPR110C SMD2Q06217 110 aaKnown RBP2.02□□□□□ -2.09
RPC40YPR110C SUE1Q06524 206 aa2.02□□□□□ -2.09
RPC40YPR110C DCN1Q12395 269 aa2.02□□□□□ -2.09
RPC40YPR110C YOR020W-AQ3E824 90 aa2.02□□□□□ -2.09
RPC40YPR110C JIP3O13555 125 aa2.01□□□□□ -2.09
RPC40YPR110C ADH3P07246 375 aaKnown RBP2.01□□□□□ -2.09
RPC40YPR110C URA6P15700 204 aa2.01□□□□□ -2.09
RPC40YPR110C SRY1P36007 326 aa2.01□□□□□ -2.09
RPC40YPR110C MED6P38782 295 aa2.01□□□□□ -2.09
RPC40YPR110C ERG28P40030 148 aa2.01□□□□□ -2.09
RPC40YPR110C MGA1P53050 456 aa2.01□□□□□ -2.09
RPC40YPR110C YGR026WP53217 278 aa2.01□□□□□ -2.09
RPC40YPR110C ABF2Q02486 183 aa2.01□□□□□ -2.09
RPC40YPR110C RDS3Q06835 107 aaPredicted RBP2.01□□□□□ -2.09
RPC40YPR110C NIP7Q08962 181 aaKnown RBP2.01□□□□□ -2.09
RPC40YPR110C MOT1P32333 1867 aa2.01□□□□□ -2.09
RPC40YPR110C CDC36P06100 191 aaPredicted RBP2□□□□□ -2.09
RPC40YPR110C CDC33P07260 213 aaKnown RBP2□□□□□ -2.09
RPC40YPR110C DSF1P0CX08 502 aa2□□□□□ -2.09
RPC40YPR110C YNR073CP0CX09 502 aa2□□□□□ -2.09
RPC40YPR110C STE18P18852 110 aa2□□□□□ -2.09
RPC40YPR110C ASF2P32448 525 aaPredicted RBP2□□□□□ -2.09
RPC40YPR110C CTR2P38865 189 aa2□□□□□ -2.09
RPC40YPR110C GAA1P39012 614 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms