RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C CPA1P07258 411 aaKnown RBP0.39□□□□□ -2.35
NIP100YPL174C NSP1P14907 823 aaKnown RBP0.39□□□□□ -2.35
NIP100YPL174C SNC2P33328 115 aa0.39□□□□□ -2.35
NIP100YPL174C GAA1P39012 614 aa0.39□□□□□ -2.35
NIP100YPL174C MEI4P29467 408 aa0.38□□□□□ -2.35
NIP100YPL174C SRB4P32569 687 aa0.38□□□□□ -2.35
NIP100YPL174C YRB2P40517 327 aa0.38□□□□□ -2.35
NIP100YPL174C PAM18Q07914 168 aa0.38□□□□□ -2.35
NIP100YPL174C SEC16P48415 2195 aaKnown RBP0.38□□□□□ -2.35
NIP100YPL174C STP22P25604 385 aa0.38□□□□□ -2.35
NIP100YPL174C RIB7P33312 244 aa0.38□□□□□ -2.35
NIP100YPL174C YBR209WP38311 105 aa0.38□□□□□ -2.35
NIP100YPL174C POP4P38336 279 aa0.38□□□□□ -2.35
NIP100YPL174C AST2P39945 430 aaKnown RBP0.38□□□□□ -2.35
NIP100YPL174C YAR1P46683 200 aa0.38□□□□□ -2.35
NIP100YPL174C YNR077CP53758 84 aa0.38□□□□□ -2.35
NIP100YPL174C PDR18P53756 1333 aa0.38□□□□□ -2.35
NIP100YPL174C ULS1Q08562 1619 aa0.38□□□□□ -2.35
NIP100YPL174C ERD2P18414 219 aa0.37□□□□□ -2.35
NIP100YPL174C EHD3P28817 500 aa0.37□□□□□ -2.35
NIP100YPL174C YUH1P35127 236 aa0.37□□□□□ -2.35
NIP100YPL174C COX15P40086 486 aa0.37□□□□□ -2.35
NIP100YPL174C RPA43P46669 326 aa0.37□□□□□ -2.35
NIP100YPL174C TRM9P49957 279 aa0.37□□□□□ -2.35
NIP100YPL174C TRM12Q04235 462 aa0.37□□□□□ -2.35
NIP100YPL174C LPP1Q04396 274 aa0.37□□□□□ -2.35
NIP100YPL174C MED4Q12343 284 aa0.37□□□□□ -2.35
NIP100YPL174C TSC3Q3E790 80 aa0.37□□□□□ -2.35
NIP100YPL174C POL1P13382 1468 aa0.37□□□□□ -2.35
NIP100YPL174C YHR139C-AO13536 103 aa0.37□□□□□ -2.35
NIP100YPL174C YLR156WP0CE96 114 aa0.37□□□□□ -2.35
NIP100YPL174C YLR159WP0CE97 114 aa0.37□□□□□ -2.35
NIP100YPL174C YLR161WP0CE98 114 aa0.37□□□□□ -2.35
NIP100YPL174C RMD6P39975 231 aa0.37□□□□□ -2.35
NIP100YPL174C RCE1Q03530 315 aa0.37□□□□□ -2.35
NIP100YPL174C PDR10P51533 1564 aa0.37□□□□□ -2.35
NIP100YPL174C CDC10P25342 322 aaKnown RBP0.36□□□□□ -2.35
NIP100YPL174C RPS5P26783 225 aaKnown RBP0.36□□□□□ -2.35
NIP100YPL174C ECM4P36156 370 aa0.36□□□□□ -2.35
NIP100YPL174C YHR007C-AQ07074 71 aa0.36□□□□□ -2.35
NIP100YPL174C PSF1Q12488 208 aa0.36□□□□□ -2.35
NIP100YPL174C TDA8Q6B2U8 126 aa0.36□□□□□ -2.35
NIP100YPL174C TOP2P06786 1428 aaKnown RBP0.36□□□□□ -2.35
NIP100YPL174C BNI1P41832 1953 aa0.36□□□□□ -2.35
NIP100YPL174C MSN4P33749 630 aa0.36□□□□□ -2.35
NIP100YPL174C UMP1P38293 148 aa0.36□□□□□ -2.35
NIP100YPL174C TVP23P38962 199 aa0.36□□□□□ -2.35
NIP100YPL174C YNL134CP53912 376 aaKnown RBP0.36□□□□□ -2.35
NIP100YPL174C YRF1-2P40105 1681 aa0.36□□□□□ -2.35
NIP100YPL174C ESC1Q03661 1658 aaKnown RBP0.36□□□□□ -2.35
NIP100YPL174C GCN1P33892 2672 aaKnown RBP0.36□□□□□ -2.35
NIP100YPL174C SIR2P06700 562 aa0.35□□□□□ -2.35
NIP100YPL174C SRY1P36007 326 aa0.35□□□□□ -2.35
NIP100YPL174C URA8P38627 578 aaPredicted RBP0.35□□□□□ -2.35
NIP100YPL174C PEX17P40155 199 aa0.35□□□□□ -2.35
NIP100YPL174C FYV6P53913 173 aa0.35□□□□□ -2.35
NIP100YPL174C YNL010WP53981 241 aaKnown RBP0.35□□□□□ -2.35
NIP100YPL174C AIM36Q03798 255 aa0.35□□□□□ -2.35
NIP100YPL174C YLR173WQ06247 608 aa0.35□□□□□ -2.35
NIP100YPL174C TIM9O74700 87 aa0.35□□□□□ -2.35
NIP100YPL174C MSF1P08425 469 aa0.35□□□□□ -2.35
NIP100YPL174C KNH1P50112 268 aa0.35□□□□□ -2.35
NIP100YPL174C PRM8P53174 237 aa0.35□□□□□ -2.35
NIP100YPL174C ATG40Q99325 256 aa0.35□□□□□ -2.35
NIP100YPL174C CDC36P06100 191 aaPredicted RBP0.34□□□□□ -2.35
NIP100YPL174C DBF2P22204 572 aa0.34□□□□□ -2.35
NIP100YPL174C YCR016WP25617 290 aaKnown RBP0.34□□□□□ -2.35
NIP100YPL174C SSO1P32867 290 aa0.34□□□□□ -2.35
NIP100YPL174C LDB7P38210 180 aa0.34□□□□□ -2.35
NIP100YPL174C CUE4Q04201 117 aaPredicted RBP0.34□□□□□ -2.35
NIP100YPL174C KRE28Q04431 385 aa0.34□□□□□ -2.35
NIP100YPL174C CFT1Q06632 1357 aaKnown RBP0.34□□□□□ -2.35
NIP100YPL174C RPL28P02406 149 aaKnown RBP0.34□□□□□ -2.36
NIP100YPL174C YER188C-AP0C0V2 99 aa0.34□□□□□ -2.36
NIP100YPL174C PTM1P32857 523 aa0.34□□□□□ -2.36
NIP100YPL174C SIP3P38717 1229 aa0.34□□□□□ -2.36
NIP100YPL174C YEL067CP39978 195 aa0.34□□□□□ -2.36
NIP100YPL174C HOC1P47124 396 aa0.34□□□□□ -2.36
NIP100YPL174C MCM22P47167 239 aa0.34□□□□□ -2.36
NIP100YPL174C DOC1P53068 250 aa0.34□□□□□ -2.36
NIP100YPL174C ARO8P53090 500 aaKnown RBP0.34□□□□□ -2.36
NIP100YPL174C NOP13P53883 403 aaKnown RBP RIP-Chip data0.34□□□□□ -2.36not detected
NIP100YPL174C SWP1Q02795 286 aa0.34□□□□□ -2.36
NIP100YPL174C URA6P15700 204 aa0.34□□□□□ -2.36
NIP100YPL174C PBN1P25580 416 aa0.34□□□□□ -2.36
NIP100YPL174C MRPL17P36528 281 aa0.34□□□□□ -2.36
NIP100YPL174C OPY1P38271 328 aa0.34□□□□□ -2.36
NIP100YPL174C KAP95Q06142 861 aaKnown RBP0.34□□□□□ -2.36
NIP100YPL174C CDC28P00546 298 aaKnown RBP0.33□□□□□ -2.36
NIP100YPL174C RPL40AP0CH08 128 aaKnown RBP0.33□□□□□ -2.36
NIP100YPL174C RPL40BP0CH09 128 aaKnown RBP0.33□□□□□ -2.36
NIP100YPL174C YHR212W-AP0CX91 67 aa0.33□□□□□ -2.36
NIP100YPL174C EDC3P39998 551 aaKnown RBP0.33□□□□□ -2.36
NIP100YPL174C GVP36P40531 326 aaKnown RBP0.33□□□□□ -2.36
NIP100YPL174C RAD28Q12021 506 aa0.33□□□□□ -2.36
NIP100YPL174C BCY1P07278 416 aaKnown RBP0.33□□□□□ -2.36
NIP100YPL174C YKL075CP36083 450 aa0.33□□□□□ -2.36
NIP100YPL174C FMC1P40491 155 aa0.33□□□□□ -2.36
NIP100YPL174C BXI1P48558 297 aa0.33□□□□□ -2.36
NIP100YPL174C CDC123Q05791 360 aa0.33□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms