RNA–Protein interactions for RNA: YPL080C

YPL080C, Transcript of Dubious open reading frame, yeastyeast

Gene YPL080C, Length 327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPL080CYPL080C MSS2P40990 351 aa1.23□□□□□ -2.21
YPL080CYPL080C NUP57P48837 541 aa1.23□□□□□ -2.21
YPL080CYPL080C CWC23P52868 283 aaPredicted RBP1.23□□□□□ -2.21
YPL080CYPL080C MGA1P53050 456 aa1.23□□□□□ -2.21
YPL080CYPL080C DID2P69771 204 aa1.23□□□□□ -2.21
YPL080CYPL080C SNZ1Q03148 297 aa1.23□□□□□ -2.21
YPL080CYPL080C SML1Q04964 104 aa1.23□□□□□ -2.21
YPL080CYPL080C TDA8Q6B2U8 126 aa1.23□□□□□ -2.21
YPL080CYPL080C FLO9P39712 1322 aa1.22□□□□□ -2.21
YPL080CYPL080C YDR157WA0A023PZE8 133 aa1.22□□□□□ -2.21
YPL080CYPL080C YBR121C-AP0C5L4 52 aa1.22□□□□□ -2.21
YPL080CYPL080C FZF1P32805 299 aa1.22□□□□□ -2.21
YPL080CYPL080C PRP18P33411 251 aaPredicted RBP1.22□□□□□ -2.21
YPL080CYPL080C PRX1P34227 261 aaKnown RBP1.22□□□□□ -2.21
YPL080CYPL080C YKR045CP36138 183 aa1.22□□□□□ -2.21
YPL080CYPL080C SVP26P38869 228 aa1.22□□□□□ -2.21
YPL080CYPL080C GLE2P40066 365 aa1.22□□□□□ -2.21
YPL080CYPL080C YER135CP40082 130 aa1.22□□□□□ -2.21
YPL080CYPL080C ICE2P40499 491 aa1.22□□□□□ -2.21
YPL080CYPL080C YRB2P40517 327 aa1.22□□□□□ -2.21
YPL080CYPL080C TIR3P40552 269 aa1.22□□□□□ -2.21
YPL080CYPL080C TIM11P81449 96 aaPredicted RBP1.22□□□□□ -2.21
YPL080CYPL080C JLP1Q12358 412 aa1.22□□□□□ -2.21
YPL080CYPL080C UBR2Q07963 1872 aa1.21□□□□□ -2.22
YPL080CYPL080C YOL162WP0CF19 215 aa1.21□□□□□ -2.22
YPL080CYPL080C SEC17P32602 292 aa1.21□□□□□ -2.22
YPL080CYPL080C UTP30P36144 274 aaKnown RBP1.21□□□□□ -2.22
YPL080CYPL080C TCD1P38756 429 aa1.21□□□□□ -2.22
YPL080CYPL080C YRB1P41920 201 aaKnown RBP1.21□□□□□ -2.22
YPL080CYPL080C FAR7P43592 221 aa1.21□□□□□ -2.22
YPL080CYPL080C DOC1P53068 250 aa1.21□□□□□ -2.22
YPL080CYPL080C YML108WQ03759 105 aa1.21□□□□□ -2.22
YPL080CYPL080C RNH1Q04740 348 aa1.21□□□□□ -2.22
YPL080CYPL080C YLR162WQ06235 118 aa1.21□□□□□ -2.22
YPL080CYPL080C MCP1Q12106 302 aa1.21□□□□□ -2.22
YPL080CYPL080C GIS3Q12418 502 aa1.21□□□□□ -2.22
YPL080CYPL080C YHR214C-EQ8TGK0 99 aa1.21□□□□□ -2.22
YPL080CYPL080C SEC4P07560 215 aaKnown RBP1.2□□□□□ -2.22
YPL080CYPL080C STE18P18852 110 aa1.2□□□□□ -2.22
YPL080CYPL080C COQ1P18900 473 aa1.2□□□□□ -2.22
YPL080CYPL080C SPS18P32572 300 aa1.2□□□□□ -2.22
YPL080CYPL080C PTM1P32857 523 aa1.2□□□□□ -2.22
YPL080CYPL080C MRPL17P36528 281 aa1.2□□□□□ -2.22
YPL080CYPL080C RAD17P48581 401 aa1.2□□□□□ -2.22
YPL080CYPL080C SWP1Q02795 286 aa1.2□□□□□ -2.22
YPL080CYPL080C CSI2Q08054 341 aa1.2□□□□□ -2.22
YPL080CYPL080C YPL162CQ12042 273 aa1.2□□□□□ -2.22
YPL080CYPL080C CYR1P08678 2026 aaKnown RBP1.2□□□□□ -2.22
YPL080CYPL080C TUS1Q06412 1307 aa1.19□□□□□ -2.22
YPL080CYPL080C MRPS28P21771 286 aa1.19□□□□□ -2.22
YPL080CYPL080C TAF14P35189 244 aa1.19□□□□□ -2.22
YPL080CYPL080C YNL217WP40152 326 aa1.19□□□□□ -2.22
YPL080CYPL080C PET191Q02772 108 aa1.19□□□□□ -2.22
YPL080CYPL080C RUD3Q12234 484 aaKnown RBP1.19□□□□□ -2.22
YPL080CYPL080C TSC3Q3E790 80 aa1.19□□□□□ -2.22
YPL080CYPL080C TIM9O74700 87 aa1.18□□□□□ -2.22
YPL080CYPL080C MRPL28P36527 147 aa1.18□□□□□ -2.22
YPL080CYPL080C EAF6P47128 113 aa1.18□□□□□ -2.22
YPL080CYPL080C YGR050CP53231 118 aa1.18□□□□□ -2.22
YPL080CYPL080C BUD25P85052 153 aa1.18□□□□□ -2.22
YPL080CYPL080C MET5P47169 1442 aa1.17□□□□□ -2.22
YPL080CYPL080C YGL010WP25338 174 aa1.17□□□□□ -2.22
YPL080CYPL080C IDH1P28834 360 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
YPL080CYPL080C MGM101P32787 269 aaKnown RBP1.17□□□□□ -2.22
YPL080CYPL080C RMD6P39975 231 aa1.17□□□□□ -2.22
YPL080CYPL080C GCN20P43535 752 aaKnown RBP1.17□□□□□ -2.22
YPL080CYPL080C PDR17P53844 350 aa1.17□□□□□ -2.22
YPL080CYPL080C PGA2P53903 129 aa1.17□□□□□ -2.22
YPL080CYPL080C YFR032C-BQ8TGU2 87 aa1.17□□□□□ -2.22
YPL080CYPL080C RPL2AP0CX45 254 aaKnown RBP1.16□□□□□ -2.22
YPL080CYPL080C RPL2BP0CX46 254 aaKnown RBP1.16□□□□□ -2.22
YPL080CYPL080C GCN3P14741 305 aa1.16□□□□□ -2.22
YPL080CYPL080C YET1P35723 206 aa1.16□□□□□ -2.22
YPL080CYPL080C SKG1P36169 355 aa1.16□□□□□ -2.22
YPL080CYPL080C UMP1P38293 148 aa1.16□□□□□ -2.22
YPL080CYPL080C YBR220CP38318 560 aa1.16□□□□□ -2.22
YPL080CYPL080C GAA1P39012 614 aa1.16□□□□□ -2.22
YPL080CYPL080C AST2P39945 430 aaKnown RBP1.16□□□□□ -2.22
YPL080CYPL080C LSM7P53905 115 aaKnown RBP1.16□□□□□ -2.22
YPL080CYPL080C NUP49Q02199 472 aa1.16□□□□□ -2.22
YPL080CYPL080C YDR249CQ03787 373 aa1.16□□□□□ -2.22
YPL080CYPL080C NCB2Q92317 146 aa1.16□□□□□ -2.22
YPL080CYPL080C KSS1P14681 368 aa1.15□□□□□ -2.23
YPL080CYPL080C MER1P16523 270 aa1.15□□□□□ -2.23
YPL080CYPL080C RFA3P26755 122 aaKnown RBP1.15□□□□□ -2.23
YPL080CYPL080C YCR087C-AP37263 153 aa1.15□□□□□ -2.23
YPL080CYPL080C GVP36P40531 326 aaKnown RBP1.15□□□□□ -2.23
YPL080CYPL080C BNA7Q04066 261 aa1.15□□□□□ -2.23
YPL080CYPL080C YOL160WQ08321 113 aa1.15□□□□□ -2.23
YPL080CYPL080C CDC36P06100 191 aaPredicted RBP1.14□□□□□ -2.23
YPL080CYPL080C CPA1P07258 411 aaKnown RBP1.14□□□□□ -2.23
YPL080CYPL080C BET1P22804 142 aa1.14□□□□□ -2.23
YPL080CYPL080C SNC2P33328 115 aa1.14□□□□□ -2.23
YPL080CYPL080C RPL13BP40212 199 aaKnown RBP1.14□□□□□ -2.23
YPL080CYPL080C IRC18P47056 224 aa1.14□□□□□ -2.23
YPL080CYPL080C YDR274CP87283 123 aa1.14□□□□□ -2.23
YPL080CYPL080C YNG1Q08465 219 aa1.14□□□□□ -2.23
YPL080CYPL080C GPM2Q12008 311 aa1.14□□□□□ -2.23
YPL080CYPL080C FSF1Q12029 327 aaKnown RBP1.14□□□□□ -2.23
YPL080CYPL080C RPL13AQ12690 199 aaPredicted RBP1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms