RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C LOH1P47055 219 aa2.82□□□□□ -1.96
RPA43YOR340C SPO19Q03029 223 aa2.82□□□□□ -1.96
RPA43YOR340C OST6Q03723 332 aa2.82□□□□□ -1.96
RPA43YOR340C TAZ1Q06510 381 aa2.82□□□□□ -1.96
RPA43YOR340C RAF1Q06891 181 aa2.82□□□□□ -1.96
RPA43YOR340C VIK1Q12045 647 aa2.82□□□□□ -1.96
RPA43YOR340C SIA1Q12212 622 aa2.82□□□□□ -1.96
RPA43YOR340C YDL180WQ12301 547 aa2.82□□□□□ -1.96
RPA43YOR340C RIB3Q99258 208 aa2.82□□□□□ -1.96
RPA43YOR340C FBA1P14540 359 aaKnown RBP2.81□□□□□ -1.96
RPA43YOR340C GIT1P25346 518 aa2.81□□□□□ -1.96
RPA43YOR340C VPH2P32341 215 aa2.81□□□□□ -1.96
RPA43YOR340C RAD23P32628 398 aaKnown RBP2.81□□□□□ -1.96
RPA43YOR340C MRPL39P36533 70 aa2.81□□□□□ -1.96
RPA43YOR340C DTR1P38125 572 aa2.81□□□□□ -1.96
RPA43YOR340C YBR285WP38354 144 aa2.81□□□□□ -1.96
RPA43YOR340C CHL4P38907 458 aa2.81□□□□□ -1.96
RPA43YOR340C OXA1P39952 402 aa2.81□□□□□ -1.96
RPA43YOR340C DFG10P40526 253 aa2.81□□□□□ -1.96
RPA43YOR340C FAR7P43592 221 aa2.81□□□□□ -1.96
RPA43YOR340C YGL185CP53100 379 aa2.81□□□□□ -1.96
RPA43YOR340C MKC7P53379 596 aa2.81□□□□□ -1.96
RPA43YOR340C PGA1P53896 198 aa2.81□□□□□ -1.96
RPA43YOR340C ASI3P53983 676 aa2.81□□□□□ -1.96
RPA43YOR340C CTS2Q06350 511 aa2.81□□□□□ -1.96
RPA43YOR340C MIM1Q08176 113 aa2.81□□□□□ -1.96
RPA43YOR340C UIP4Q08926 304 aa2.81□□□□□ -1.96
RPA43YOR340C NIP7Q08962 181 aaKnown RBP2.81□□□□□ -1.96
RPA43YOR340C YOR289WQ12012 251 aaPredicted RBP2.81□□□□□ -1.96
RPA43YOR340C MET2P08465 486 aa2.8□□□□□ -1.96
RPA43YOR340C MIR1P23641 311 aaKnown RBP2.8□□□□□ -1.96
RPA43YOR340C CAM1P29547 415 aaKnown RBP2.8□□□□□ -1.96
RPA43YOR340C ACB1P31787 87 aa2.8□□□□□ -1.96
RPA43YOR340C OAC1P32332 324 aa2.8□□□□□ -1.96
RPA43YOR340C ASF2P32448 525 aaPredicted RBP2.8□□□□□ -1.96
RPA43YOR340C MAL32P38158 584 aa2.8□□□□□ -1.96
RPA43YOR340C ARN2P38724 620 aa2.8□□□□□ -1.96
RPA43YOR340C LSM12P38828 187 aaKnown RBP2.8□□□□□ -1.96
RPA43YOR340C MIG3P39943 394 aa2.8□□□□□ -1.96
RPA43YOR340C THO1P40040 218 aaKnown RBP2.8□□□□□ -1.96
RPA43YOR340C YER084WP40057 128 aa2.8□□□□□ -1.96
RPA43YOR340C LSM4P40070 187 aaKnown RBP2.8□□□□□ -1.96
RPA43YOR340C YGL101WP53144 215 aa2.8□□□□□ -1.96
RPA43YOR340C MAL12P53341 584 aa2.8□□□□□ -1.96
RPA43YOR340C BNA7Q04066 261 aa2.8□□□□□ -1.96
RPA43YOR340C FSH2Q05015 223 aa2.8□□□□□ -1.96
RPA43YOR340C FRE8Q12209 686 aa2.8□□□□□ -1.96
RPA43YOR340C RBD2Q12270 262 aa2.8□□□□□ -1.96
RPA43YOR340C MCT1Q12283 360 aa2.8□□□□□ -1.96
RPA43YOR340C PST2Q12335 198 aaKnown RBP2.8□□□□□ -1.96
RPA43YOR340C UTP20P35194 2493 aaKnown RBP2.79□□□□□ -1.96
RPA43YOR340C CDC36P06100 191 aaPredicted RBP2.79□□□□□ -1.96
RPA43YOR340C KIN28P06242 306 aa2.79□□□□□ -1.96
RPA43YOR340C STE18P18852 110 aa2.79□□□□□ -1.96
RPA43YOR340C YCL042WP25572 119 aa2.79□□□□□ -1.96
RPA43YOR340C RPL5P26321 297 aaKnown RBP2.79□□□□□ -1.96
RPA43YOR340C YEL045CP32616 141 aa2.79□□□□□ -1.96
RPA43YOR340C YKL187CP34231 750 aa2.79□□□□□ -1.96
RPA43YOR340C RPS20P38701 121 aaKnown RBP2.79□□□□□ -1.96
RPA43YOR340C SOP4P39543 234 aaPredicted RBP2.79□□□□□ -1.96
RPA43YOR340C AVT7P40501 490 aa2.79□□□□□ -1.96
RPA43YOR340C PFS2P42841 465 aaKnown RBP2.79□□□□□ -1.96
RPA43YOR340C MOB2P43563 287 aa2.79□□□□□ -1.96
RPA43YOR340C ILM1P47155 203 aa2.79□□□□□ -1.96
RPA43YOR340C COG5P53951 403 aa2.79□□□□□ -1.96
RPA43YOR340C NUP49Q02199 472 aa2.79□□□□□ -1.96
RPA43YOR340C YPL080CQ02826 108 aa2.79□□□□□ -1.96
RPA43YOR340C RCE1Q03530 315 aa2.79□□□□□ -1.96
RPA43YOR340C YMD8Q03697 442 aa2.79□□□□□ -1.96
RPA43YOR340C ATP16Q12165 160 aa2.79□□□□□ -1.96
RPA43YOR340C URA2P07259 2214 aaKnown RBP2.78□□□□□ -1.96
RPA43YOR340C COX5BP00425 151 aa2.78□□□□□ -1.96
RPA43YOR340C MEK1P24719 497 aaPredicted RBP2.78□□□□□ -1.96
RPA43YOR340C ECT1P33412 323 aa2.78□□□□□ -1.96
RPA43YOR340C YKL070WP36087 169 aa2.78□□□□□ -1.96
RPA43YOR340C YMR144WP40214 342 aaKnown RBP2.78□□□□□ -1.96
RPA43YOR340C PAM16P42949 149 aa2.78□□□□□ -1.96
RPA43YOR340C OKP1P53298 406 aa2.78□□□□□ -1.96
RPA43YOR340C SAY1P53324 424 aa2.78□□□□□ -1.96
RPA43YOR340C HCH1P53834 153 aa2.78□□□□□ -1.96
RPA43YOR340C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
RPA43YOR340C PET191Q02772 108 aa2.78□□□□□ -1.96
RPA43YOR340C SNZ1Q03148 297 aa2.78□□□□□ -1.96
RPA43YOR340C LIP2Q06005 328 aa2.78□□□□□ -1.96
RPA43YOR340C TMC1Q08422 150 aaPredicted RBP2.78□□□□□ -1.96
RPA43YOR340C FIT3Q08907 204 aa2.78□□□□□ -1.96
RPA43YOR340C MHF1Q3E835 90 aa2.78□□□□□ -1.96
RPA43YOR340C Q0297Q9ZZV8 51 aa2.78□□□□□ -1.96
RPA43YOR340C PHO80P20052 293 aa2.77□□□□□ -1.97
RPA43YOR340C LDS1P31379 325 aa2.77□□□□□ -1.97
RPA43YOR340C SHE1P38200 338 aa2.77□□□□□ -1.97
RPA43YOR340C MED8P38304 223 aa2.77□□□□□ -1.97
RPA43YOR340C YBR220CP38318 560 aa2.77□□□□□ -1.97
RPA43YOR340C EGD2P38879 174 aaKnown RBP2.77□□□□□ -1.97
RPA43YOR340C YIL012WP40551 113 aa2.77□□□□□ -1.97
RPA43YOR340C SIP18P50263 79 aa2.77□□□□□ -1.97
RPA43YOR340C NQM1P53228 333 aaPredicted RBP2.77□□□□□ -1.97
RPA43YOR340C SED1Q01589 338 aa2.77□□□□□ -1.97
RPA43YOR340C YPL077CQ02831 240 aa2.77□□□□□ -1.97
RPA43YOR340C AIM36Q03798 255 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms