RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C MDM34P53083 459 aa2.86□□□□□ -1.95
VPS33YLR396C PEX31P53203 462 aa2.86□□□□□ -1.95
VPS33YLR396C AAH1P53909 347 aa2.86□□□□□ -1.95
VPS33YLR396C MET31Q03081 177 aa2.86□□□□□ -1.95
VPS33YLR396C YMR252CQ04814 134 aa2.86□□□□□ -1.95
VPS33YLR396C ECM7Q06200 448 aa2.86□□□□□ -1.95
VPS33YLR396C YPR127WQ06494 345 aa2.86□□□□□ -1.95
VPS33YLR396C MRX9Q07349 420 aaKnown RBP2.86□□□□□ -1.95
VPS33YLR396C RFU1Q08003 200 aa2.86□□□□□ -1.95
VPS33YLR396C SRO7Q12038 1033 aa2.86□□□□□ -1.95
VPS33YLR396C TFC7Q12415 435 aa2.86□□□□□ -1.95
VPS33YLR396C STT4P37297 1900 aa2.85□□□□□ -1.95
VPS33YLR396C ADH2P00331 348 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C MSF1P08425 469 aa2.85□□□□□ -1.95
VPS33YLR396C UBI4P0CG63 381 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C RPL40AP0CH08 128 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C RPL40BP0CH09 128 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C SCL1P21243 252 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C PPH21P23594 369 aa2.85□□□□□ -1.95
VPS33YLR396C EXG1P23776 448 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C YEF1P32622 495 aa2.85□□□□□ -1.95
VPS33YLR396C MDL1P33310 695 aa2.85□□□□□ -1.95
VPS33YLR396C SKN1P33336 771 aa2.85□□□□□ -1.95
VPS33YLR396C YKL097CP34245 136 aa2.85□□□□□ -1.95
VPS33YLR396C INM1P38710 295 aa2.85□□□□□ -1.95
VPS33YLR396C CHL4P38907 458 aa2.85□□□□□ -1.95
VPS33YLR396C YER079WP40052 210 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C COG7P53195 279 aa2.85□□□□□ -1.95
VPS33YLR396C UTP15Q04305 513 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C SHH3Q04487 196 aa2.85□□□□□ -1.95
VPS33YLR396C RNH202Q05635 350 aa2.85□□□□□ -1.95
VPS33YLR396C FRQ1Q06389 190 aa2.85□□□□□ -1.95
VPS33YLR396C NOC4Q06512 552 aaPredicted RBP2.85□□□□□ -1.95
VPS33YLR396C FDH1Q08911 376 aa2.85□□□□□ -1.95
VPS33YLR396C DDC1Q08949 612 aa2.85□□□□□ -1.95
VPS33YLR396C FRE6Q12473 712 aa2.85□□□□□ -1.95
VPS33YLR396C YDL085C-AQ3E7B7 68 aaKnown RBP2.85□□□□□ -1.95
VPS33YLR396C CDC21P06785 304 aa2.84□□□□□ -1.95
VPS33YLR396C SGA1P08019 549 aa2.84□□□□□ -1.95
VPS33YLR396C ATP5P09457 212 aa2.84□□□□□ -1.95
VPS33YLR396C GPI12P23797 304 aa2.84□□□□□ -1.95
VPS33YLR396C SPS19P32573 292 aaKnown RBP2.84□□□□□ -1.95
VPS33YLR396C GSP1P32835 219 aaKnown RBP2.84□□□□□ -1.95
VPS33YLR396C GSP2P32836 220 aaKnown RBP2.84□□□□□ -1.95
VPS33YLR396C YOX1P34161 385 aa2.84□□□□□ -1.95
VPS33YLR396C MRPL11P36521 249 aaPredicted RBP2.84□□□□□ -1.95
VPS33YLR396C PAU24P38155 120 aa2.84□□□□□ -1.95
VPS33YLR396C PRM9P39551 298 aa2.84□□□□□ -1.95
VPS33YLR396C YJR012CP47087 207 aa2.84□□□□□ -1.95
VPS33YLR396C OST3P48439 350 aa2.84□□□□□ -1.95
VPS33YLR396C GIS2P53849 153 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
VPS33YLR396C SAE3P89114 91 aa2.84□□□□□ -1.95
VPS33YLR396C YPL067CQ02754 198 aa2.84□□□□□ -1.95
VPS33YLR396C EST3Q03096 181 aa2.84□□□□□ -1.95
VPS33YLR396C ATC1Q04005 294 aa2.84□□□□□ -1.95
VPS33YLR396C FIT1Q04433 528 aa2.84□□□□□ -1.95
VPS33YLR396C TVP18Q04767 167 aa2.84□□□□□ -1.95
VPS33YLR396C ELP6Q04868 273 aa2.84□□□□□ -1.95
VPS33YLR396C HRI1Q05905 244 aaKnown RBP2.84□□□□□ -1.95
VPS33YLR396C IPK1Q06667 281 aa2.84□□□□□ -1.95
VPS33YLR396C BER1Q06688 274 aaKnown RBP2.84□□□□□ -1.95
VPS33YLR396C BTS1Q12051 335 aa2.84□□□□□ -1.95
VPS33YLR396C SKS1Q12505 502 aa2.84□□□□□ -1.95
VPS33YLR396C COA6Q3E846 104 aa2.84□□□□□ -1.95
VPS33YLR396C PRE1P22141 198 aaKnown RBP2.84□□□□□ -1.95
VPS33YLR396C POT1P27796 417 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
VPS33YLR396C MNS1P32906 549 aa2.84□□□□□ -1.95
VPS33YLR396C MRPL4P36517 319 aa2.84□□□□□ -1.95
VPS33YLR396C YBR096WP38256 230 aa2.84□□□□□ -1.95
VPS33YLR396C YPT31P38555 223 aaKnown RBP2.84□□□□□ -1.95
VPS33YLR396C PAU15P40585 124 aa2.84□□□□□ -1.95
VPS33YLR396C MOB2P43563 287 aa2.84□□□□□ -1.95
VPS33YLR396C CCC1P47818 322 aa2.84□□□□□ -1.95
VPS33YLR396C PAU12P53343 120 aa2.84□□□□□ -1.95
VPS33YLR396C YDC1Q02896 317 aa2.84□□□□□ -1.95
VPS33YLR396C CCE1Q03702 353 aa2.84□□□□□ -1.95
VPS33YLR396C PBN1P25580 416 aa2.83□□□□□ -1.96
VPS33YLR396C DAL80P26343 269 aa2.83□□□□□ -1.96
VPS33YLR396C MCR1P36060 302 aaKnown RBP2.83□□□□□ -1.96
VPS33YLR396C YCR087C-AP37263 153 aa2.83□□□□□ -1.96
VPS33YLR396C QDR3P38227 689 aa2.83□□□□□ -1.96
VPS33YLR396C YJR056CP47115 236 aa2.83□□□□□ -1.96
VPS33YLR396C YGL101WP53144 215 aa2.83□□□□□ -1.96
VPS33YLR396C PNC1P53184 216 aaKnown RBP2.83□□□□□ -1.96
VPS33YLR396C GIM3P53900 129 aa2.83□□□□□ -1.96
VPS33YLR396C SPG3Q04398 127 aaPredicted RBP2.83□□□□□ -1.96
VPS33YLR396C AVO2Q04749 426 aa2.83□□□□□ -1.96
VPS33YLR396C NMA1Q06178 401 aaKnown RBP2.83□□□□□ -1.96
VPS33YLR396C HEM25Q07534 307 aa2.83□□□□□ -1.96
VPS33YLR396C MMT2Q08970 484 aa2.83□□□□□ -1.96
VPS33YLR396C PER33Q12144 273 aa2.83□□□□□ -1.96
VPS33YLR396C RNH203Q12338 110 aa2.83□□□□□ -1.96
VPS33YLR396C ATG5Q12380 294 aa2.83□□□□□ -1.96
VPS33YLR396C PCL9Q12477 304 aa2.83□□□□□ -1.96
VPS33YLR396C PRM4Q12498 284 aa2.83□□□□□ -1.96
VPS33YLR396C FSH3Q99369 266 aa2.83□□□□□ -1.96
VPS33YLR396C RPS25BP0C0T4 108 aaKnown RBP2.83□□□□□ -1.96
VPS33YLR396C POP5P28005 173 aa2.83□□□□□ -1.96
VPS33YLR396C PEX4P29340 183 aa2.83□□□□□ -1.96
VPS33YLR396C TIP20P33891 701 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms