RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W BRR6P53062 197 aa6.17□□□□□ -1.42
SNF4YGL115W IRC19Q07843 230 aa6.17□□□□□ -1.42
SNF4YGL115W FYV7Q12247 151 aa6.17□□□□□ -1.42
SNF4YGL115W ERG27Q12452 347 aaKnown RBP6.17□□□□□ -1.42
SNF4YGL115W YMR084WA2P2R3 262 aa6.16□□□□□ -1.42
SNF4YGL115W CDC28P00546 298 aaKnown RBP6.16□□□□□ -1.42
SNF4YGL115W ATP5P09457 212 aa6.16□□□□□ -1.42
SNF4YGL115W PAU1P0CE88 120 aa6.16□□□□□ -1.42
SNF4YGL115W PAU14P0CE89 120 aa6.16□□□□□ -1.42
SNF4YGL115W PAU6P0CE90 120 aa6.16□□□□□ -1.42
SNF4YGL115W PAU18P0CE91 120 aa6.16□□□□□ -1.42
SNF4YGL115W PAU8P0CE92 120 aa6.16□□□□□ -1.42
SNF4YGL115W PAU11P0CE93 120 aa6.16□□□□□ -1.42
SNF4YGL115W SEC62P21825 274 aa6.16□□□□□ -1.42
SNF4YGL115W MDH2P22133 377 aa6.16□□□□□ -1.42
SNF4YGL115W KRR1P25586 316 aaPredicted RBP6.16□□□□□ -1.42
SNF4YGL115W AFG1P32317 509 aa6.16□□□□□ -1.42
SNF4YGL115W OM14P38325 134 aa6.16□□□□□ -1.42
SNF4YGL115W PAU13P38725 120 aa6.16□□□□□ -1.42
SNF4YGL115W PTC7P38797 343 aa6.16□□□□□ -1.42
SNF4YGL115W IRC22P40006 225 aa6.16□□□□□ -1.42
SNF4YGL115W YNL208WP40159 199 aaKnown RBP6.16□□□□□ -1.42
SNF4YGL115W PIG2P40187 538 aa6.16□□□□□ -1.42
SNF4YGL115W RPA34P47006 233 aaPredicted RBP6.16□□□□□ -1.42
SNF4YGL115W PMT3P47190 753 aa6.16□□□□□ -1.42
SNF4YGL115W OST3P48439 350 aa6.16□□□□□ -1.42
SNF4YGL115W PBP1P53297 722 aaKnown RBP6.16□□□□□ -1.42
SNF4YGL115W ALG12P53730 551 aa6.16□□□□□ -1.42
SNF4YGL115W YLR460CP54007 376 aa6.16□□□□□ -1.42
SNF4YGL115W PAU10Q03050 120 aa6.16□□□□□ -1.42
SNF4YGL115W YPR147CQ06522 304 aaKnown RBP6.16□□□□□ -1.42
SNF4YGL115W PAU20Q08322 120 aa6.16□□□□□ -1.42
SNF4YGL115W ISA2Q12425 185 aa6.16□□□□□ -1.42
SNF4YGL115W AGC1Q12482 902 aa6.16□□□□□ -1.42
SNF4YGL115W PAU9Q3E770 120 aa6.16□□□□□ -1.42
SNF4YGL115W YDL085C-AQ3E7B7 68 aaKnown RBP6.16□□□□□ -1.42
SNF4YGL115W COA2Q3E823 68 aa6.16□□□□□ -1.42
SNF4YGL115W YIL134C-AQ45U18 67 aa6.16□□□□□ -1.42
SNF4YGL115W YLR365WQ7LIF2 110 aa6.16□□□□□ -1.42
SNF4YGL115W TDH3P00359 332 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
SNF4YGL115W MRS4P23500 304 aa6.15□□□□□ -1.42
SNF4YGL115W YCR025CP25352 136 aa6.15□□□□□ -1.42
SNF4YGL115W MKK2P32491 506 aa6.15□□□□□ -1.42
SNF4YGL115W RPL14AP36105 138 aaKnown RBP6.15□□□□□ -1.42
SNF4YGL115W AIM3P38266 947 aaKnown RBP6.15□□□□□ -1.42
SNF4YGL115W RPL14BP38754 138 aaKnown RBP6.15□□□□□ -1.42
SNF4YGL115W YFR054CP43622 192 aa6.15□□□□□ -1.42
SNF4YGL115W ATG27P46989 271 aa6.15□□□□□ -1.42
SNF4YGL115W NSA1P53136 463 aaPredicted RBP6.15□□□□□ -1.42
SNF4YGL115W MSO1P53604 210 aaKnown RBP6.15□□□□□ -1.42
SNF4YGL115W PAL1Q05518 499 aaKnown RBP6.15□□□□□ -1.42
SNF4YGL115W YLR179CQ06252 201 aaKnown RBP6.15□□□□□ -1.42
SNF4YGL115W PIN3Q06449 215 aa6.15□□□□□ -1.42
SNF4YGL115W YDL242WQ07746 117 aa6.15□□□□□ -1.42
SNF4YGL115W HNT3Q08702 217 aa6.15□□□□□ -1.42
SNF4YGL115W FCY22Q12119 530 aa6.15□□□□□ -1.42
SNF4YGL115W PRR2Q12310 699 aa6.15□□□□□ -1.42
SNF4YGL115W ATG5Q12380 294 aa6.15□□□□□ -1.42
SNF4YGL115W TRP4P07285 380 aaPredicted RBP6.14□□□□□ -1.43
SNF4YGL115W SPS4P09937 338 aa6.14□□□□□ -1.43
SNF4YGL115W CKA1P15790 372 aa6.14□□□□□ -1.43
SNF4YGL115W SCO1P23833 295 aa6.14□□□□□ -1.43
SNF4YGL115W ERG2P32352 222 aa6.14□□□□□ -1.43
SNF4YGL115W SEF1P34228 1148 aa6.14□□□□□ -1.43
SNF4YGL115W SWD2P36104 329 aaPredicted RBP6.14□□□□□ -1.43
SNF4YGL115W NSA2P40078 261 aaKnown RBP6.14□□□□□ -1.43
SNF4YGL115W YAP1802P53309 568 aa6.14□□□□□ -1.43
SNF4YGL115W HHT1P61830 136 aa6.14□□□□□ -1.43
SNF4YGL115W YVH1Q02256 364 aaKnown RBP6.14□□□□□ -1.43
SNF4YGL115W YMR090WQ04304 227 aaKnown RBP6.14□□□□□ -1.43
SNF4YGL115W YLR030WQ07967 263 aa6.14□□□□□ -1.43
SNF4YGL115W YOL029CQ08187 201 aa6.14□□□□□ -1.43
SNF4YGL115W YCL001W-BQ96VH2 84 aa6.14□□□□□ -1.43
SNF4YGL115W ILV5P06168 395 aaKnown RBP6.13□□□□□ -1.43
SNF4YGL115W RIP1P08067 215 aa6.13□□□□□ -1.43
SNF4YGL115W BGL2P15703 313 aaKnown RBP6.13□□□□□ -1.43
SNF4YGL115W VMA16P23968 213 aa6.13□□□□□ -1.43
SNF4YGL115W PEX4P29340 183 aa6.13□□□□□ -1.43
SNF4YGL115W AHT1P29589 182 aa6.13□□□□□ -1.43
SNF4YGL115W GLC7P32598 312 aaKnown RBP6.13□□□□□ -1.43
SNF4YGL115W UPS2P35200 230 aa6.13□□□□□ -1.43
SNF4YGL115W YJL193WP39542 402 aa6.13□□□□□ -1.43
SNF4YGL115W SHR5P41912 237 aa6.13□□□□□ -1.43
SNF4YGL115W YGR149WP48236 432 aa6.13□□□□□ -1.43
SNF4YGL115W HSV2P50079 448 aaPredicted RBP6.13□□□□□ -1.43
SNF4YGL115W RSM23Q01163 450 aa6.13□□□□□ -1.43
SNF4YGL115W GIS1Q03833 894 aa6.13□□□□□ -1.43
SNF4YGL115W FRE8Q12209 686 aa6.13□□□□□ -1.43
SNF4YGL115W ERV2Q12284 196 aa6.13□□□□□ -1.43
SNF4YGL115W SME1Q12330 94 aaPredicted RBP6.13□□□□□ -1.43
SNF4YGL115W RPS14AP06367 137 aaKnown RBP6.12□□□□□ -1.43
SNF4YGL115W YSF3P0C074 85 aaPredicted RBP6.12□□□□□ -1.43
SNF4YGL115W RPL31AP0C2H8 113 aaKnown RBP6.12□□□□□ -1.43
SNF4YGL115W RPL31BP0C2H9 113 aaKnown RBP6.12□□□□□ -1.43
SNF4YGL115W MNS1P32906 549 aa6.12□□□□□ -1.43
SNF4YGL115W RPS27AP35997 82 aaKnown RBP6.12□□□□□ -1.43
SNF4YGL115W RPS27BP38711 82 aa6.12□□□□□ -1.43
SNF4YGL115W RPS14BP39516 138 aaKnown RBP6.12□□□□□ -1.43
SNF4YGL115W ELO1P39540 310 aa6.12□□□□□ -1.43
SNF4YGL115W NOP16P40007 231 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 113.8 ms