RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C RGS2Q99188 309 aa1.26□□□□□ -2.21
PRE4YFR050C NMT1P14743 455 aa1.25□□□□□ -2.21
PRE4YFR050C HXT2P23585 541 aa1.25□□□□□ -2.21
PRE4YFR050C CBF5P33322 483 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
PRE4YFR050C KTI12P34253 313 aaKnown RBP1.25□□□□□ -2.21
PRE4YFR050C RFT1P38206 574 aaPredicted RBP1.25□□□□□ -2.21
PRE4YFR050C YER034WP40022 185 aaKnown RBP1.25□□□□□ -2.21
PRE4YFR050C YJL144WP47009 104 aa1.25□□□□□ -2.21
PRE4YFR050C AIF1P52923 378 aa1.25□□□□□ -2.21
PRE4YFR050C TOS8P53147 276 aa1.25□□□□□ -2.21
PRE4YFR050C FMP48P53233 369 aa1.25□□□□□ -2.21
PRE4YFR050C MAL13P53338 473 aa1.25□□□□□ -2.21
PRE4YFR050C UTP6Q02354 440 aaKnown RBP1.25□□□□□ -2.21
PRE4YFR050C RCF1Q03713 159 aa1.25□□□□□ -2.21
PRE4YFR050C TAR1Q8TGM6 124 aa1.25□□□□□ -2.21
PRE4YFR050C RAD1P06777 1100 aa1.24□□□□□ -2.21
PRE4YFR050C DDR48P18899 430 aaKnown RBP1.24□□□□□ -2.21
PRE4YFR050C RPC19P28000 142 aaKnown RBP1.24□□□□□ -2.21
PRE4YFR050C TCA17P32613 152 aa1.24□□□□□ -2.21
PRE4YFR050C YOR062CP36025 268 aa1.24□□□□□ -2.21
PRE4YFR050C KRE29P40026 464 aa1.24□□□□□ -2.21
PRE4YFR050C YMR134WP40207 237 aa1.24□□□□□ -2.21
PRE4YFR050C MIC19P43594 170 aa1.24□□□□□ -2.21
PRE4YFR050C YGL118CP53132 145 aa1.24□□□□□ -2.21
PRE4YFR050C CAX4P53223 239 aa1.24□□□□□ -2.21
PRE4YFR050C RPN6Q12377 434 aa1.24□□□□□ -2.21
PRE4YFR050C MRPL20P22354 195 aaPredicted RBP1.23□□□□□ -2.21
PRE4YFR050C PPQ1P32945 549 aa1.23□□□□□ -2.21
PRE4YFR050C ALP1P38971 573 aa1.23□□□□□ -2.21
PRE4YFR050C RMD6P39975 231 aa1.23□□□□□ -2.21
PRE4YFR050C YCH1P42937 148 aa1.23□□□□□ -2.21
PRE4YFR050C DBP6P53734 629 aaKnown RBP1.23□□□□□ -2.21
PRE4YFR050C ECM19Q06011 112 aa1.23□□□□□ -2.21
PRE4YFR050C HRT1Q08273 121 aa1.23□□□□□ -2.21
PRE4YFR050C YPR063CQ12160 140 aa1.23□□□□□ -2.21
PRE4YFR050C YOR343CQ12484 108 aa1.23□□□□□ -2.21
PRE4YFR050C KIN28P06242 306 aa1.22□□□□□ -2.21
PRE4YFR050C STF2P16965 84 aa1.22□□□□□ -2.21
PRE4YFR050C CAM1P29547 415 aaKnown RBP1.22□□□□□ -2.21
PRE4YFR050C LAS1P36146 502 aaPredicted RBP1.22□□□□□ -2.21
PRE4YFR050C YHR122WP38829 231 aa1.22□□□□□ -2.21
PRE4YFR050C RRG9P40156 214 aa1.22□□□□□ -2.21
PRE4YFR050C PIR5P46999 287 aa1.22□□□□□ -2.21
PRE4YFR050C YDC1Q02896 317 aa1.22□□□□□ -2.21
PRE4YFR050C DTD1Q07648 150 aaKnown RBP1.22□□□□□ -2.21
PRE4YFR050C TFC7Q12415 435 aa1.22□□□□□ -2.21
PRE4YFR050C SPT3P06844 337 aa1.21□□□□□ -2.22
PRE4YFR050C DBP3P20447 523 aaKnown RBP1.21□□□□□ -2.22
PRE4YFR050C VMA5P31412 392 aaKnown RBP1.21□□□□□ -2.22
PRE4YFR050C OCH1P31755 480 aa1.21□□□□□ -2.22
PRE4YFR050C YER137CP40083 148 aaKnown RBP1.21□□□□□ -2.22
PRE4YFR050C GON7P46984 123 aa1.21□□□□□ -2.22
PRE4YFR050C YJL016WP47072 561 aa1.21□□□□□ -2.22
PRE4YFR050C SDS23P53172 527 aa1.21□□□□□ -2.22
PRE4YFR050C YGR016WP53209 190 aa1.21□□□□□ -2.22
PRE4YFR050C PXR1P53335 271 aaPredicted RBP1.21□□□□□ -2.22
PRE4YFR050C YNL140CP53910 189 aa1.21□□□□□ -2.22
PRE4YFR050C YLR283WQ05867 314 aa1.21□□□□□ -2.22
PRE4YFR050C GMC2Q06201 188 aa1.21□□□□□ -2.22
PRE4YFR050C DBP9Q06218 594 aaKnown RBP1.21□□□□□ -2.22
PRE4YFR050C MRX9Q07349 420 aaKnown RBP1.21□□□□□ -2.22
PRE4YFR050C CDC8P00572 216 aa1.2□□□□□ -2.22
PRE4YFR050C TAL1P15019 335 aaKnown RBP1.2□□□□□ -2.22
PRE4YFR050C CAT2P32796 670 aaKnown RBP1.2□□□□□ -2.22
PRE4YFR050C SKG1P36169 355 aa1.2□□□□□ -2.22
PRE4YFR050C YBL081WP38180 368 aaKnown RBP1.2□□□□□ -2.22
PRE4YFR050C ASP1P38986 381 aaPredicted RBP1.2□□□□□ -2.22
PRE4YFR050C NFI1Q12216 726 aa1.2□□□□□ -2.22
PRE4YFR050C RUD3Q12234 484 aaKnown RBP1.2□□□□□ -2.22
PRE4YFR050C IES3Q12345 250 aa1.2□□□□□ -2.22
PRE4YFR050C TRM10Q12400 293 aa1.2□□□□□ -2.22
PRE4YFR050C PRM4Q12498 284 aa1.2□□□□□ -2.22
PRE4YFR050C TDH2P00358 332 aaKnown RBP1.19□□□□□ -2.22
PRE4YFR050C TDH3P00359 332 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
PRE4YFR050C CBP2P03874 630 aaPredicted RBP1.19□□□□□ -2.22
PRE4YFR050C RAD7P06779 565 aa1.19□□□□□ -2.22
PRE4YFR050C MRS4P23500 304 aa1.19□□□□□ -2.22
PRE4YFR050C MGT1P26188 188 aa1.19□□□□□ -2.22
PRE4YFR050C ACB1P31787 87 aa1.19□□□□□ -2.22
PRE4YFR050C SSO1P32867 290 aa1.19□□□□□ -2.22
PRE4YFR050C VPS21P36017 210 aaKnown RBP1.19□□□□□ -2.22
PRE4YFR050C MED8P38304 223 aa1.19□□□□□ -2.22
PRE4YFR050C CAJ1P39101 391 aa1.19□□□□□ -2.22
PRE4YFR050C EDC2P40023 145 aaPredicted RBP1.19□□□□□ -2.22
PRE4YFR050C YRB1P41920 201 aaKnown RBP1.19□□□□□ -2.22
PRE4YFR050C YGL088WP53151 121 aa1.19□□□□□ -2.22
PRE4YFR050C YGR168CP53293 376 aa1.19□□□□□ -2.22
PRE4YFR050C MET31Q03081 177 aa1.19□□□□□ -2.22
PRE4YFR050C GTO3Q04806 366 aa1.19□□□□□ -2.22
PRE4YFR050C MIM1Q08176 113 aa1.19□□□□□ -2.22
PRE4YFR050C VIK1Q12045 647 aa1.19□□□□□ -2.22
PRE4YFR050C CMC4Q3E7A9 73 aa1.19□□□□□ -2.22
PRE4YFR050C YCL012CQ8J0M4 134 aa1.19□□□□□ -2.22
PRE4YFR050C RPL2AP0CX45 254 aaKnown RBP1.18□□□□□ -2.22
PRE4YFR050C RPL2BP0CX46 254 aaKnown RBP1.18□□□□□ -2.22
PRE4YFR050C DPB2P24482 689 aaPredicted RBP1.18□□□□□ -2.22
PRE4YFR050C DOA4P32571 926 aa1.18□□□□□ -2.22
PRE4YFR050C YKR032WP36127 104 aa1.18□□□□□ -2.22
PRE4YFR050C ECM31P38122 312 aa1.18□□□□□ -2.22
PRE4YFR050C YJL218WP40892 196 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms