RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	MSS4	P38994	779 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	YFR057W	P43625	151 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	CIN2	P46670	268 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	GEP7	P53171	287 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	SDC1	Q03323	175 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	TPO3	Q06451	622 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	PHO2	P07269	559 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	GLY1	P37303	387 aa	Known RBP	4.11	□□□□□ -1.75
PDR15	YDR406W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
PDR15	YDR406W	GPI16	P38875	610 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	VMA7	P39111	118 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	RMD6	P39975	231 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	YNL195C	P40168	261 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	PAM16	P42949	149 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	ERJ5	P43613	295 aa	Predicted RBP	4.11	□□□□□ -1.75
PDR15	YDR406W	UPS1	Q05776	175 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	ATP16	Q12165	160 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	YLR415C	O13578	112 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	DEG1	P31115	442 aa	Known RBP	4.11	□□□□□ -1.75
PDR15	YDR406W	MRPL16	P38064	232 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	SEN34	P39707	275 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	SDH7	Q04401	133 aa		4.11	□□□□□ -1.75
PDR15	YDR406W	CYC1	P00044	109 aa	Predicted RBP	4.1	□□□□□ -1.75
PDR15	YDR406W	SEC59	P20048	519 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	CAT5	P41735	233 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	ACT1	P60010	375 aa	Known RBP	4.1	□□□□□ -1.75
PDR15	YDR406W	CDC28	P00546	298 aa	Known RBP	4.1	□□□□□ -1.75
PDR15	YDR406W	RPL12A	P0CX53	165 aa	Known RBP	4.1	□□□□□ -1.75
PDR15	YDR406W	RPL12B	P0CX54	165 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	PRS2	P38620	318 aa	Known RBP	4.1	□□□□□ -1.75
PDR15	YDR406W	YHC3	P47040	408 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	YGL235W	P53071	178 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	VHT1	P53241	593 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	FMP41	P53889	259 aa	Known RBP	4.1	□□□□□ -1.75
PDR15	YDR406W	RUB1	Q03919	77 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	YDR415C	Q04033	374 aa	Predicted RBP	4.1	□□□□□ -1.75
PDR15	YDR406W	ORT1	Q12375	292 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	DCN1	Q12395	269 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	STT4	P37297	1900 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	BAR1	P12630	587 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	YPS1	P32329	569 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	TCM62	P38228	572 aa	Known RBP	4.1	□□□□□ -1.75
PDR15	YDR406W	ERV15	P38312	142 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	SNO3	P43544	222 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	POP6	P53218	158 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	TIM44	Q01852	431 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	YPL077C	Q02831	240 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	TY1A-MR1	Q04215	440 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	TY1A-BL	Q12266	440 aa		4.1	□□□□□ -1.75
PDR15	YDR406W	RPS13	P05756	151 aa	Known RBP	4.09	□□□□□ -1.75
PDR15	YDR406W	RPL30	P14120	105 aa	Known RBP	4.09	□□□□□ -1.75
PDR15	YDR406W	MXR2	P25566	168 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	XBP1	P40489	647 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	YIL086C	P40503	102 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	BUL1	P48524	976 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	GPI15	P53961	229 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	ABF2	Q02486	183 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	VPS28	Q02767	242 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	GIS1	Q03833	894 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	UTP15	Q04305	513 aa	Known RBP	4.09	□□□□□ -1.75
PDR15	YDR406W	RNA15	P25299	296 aa	Predicted RBP	4.09	□□□□□ -1.75
PDR15	YDR406W	CNE1	P27825	502 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	ERG28	P40030	148 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	SOL1	P50278	321 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	SOK2	P53438	785 aa	Predicted RBP	4.09	□□□□□ -1.75
PDR15	YDR406W	DYN2	Q02647	92 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	MED7	Q08278	222 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	GEP3	Q08622	556 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	ATG41	Q12048	136 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	TMS1	Q12116	473 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	ADH2	P00331	348 aa	Known RBP	4.09	□□□□□ -1.75
PDR15	YDR406W	MSK1	P32048	576 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	IKS1	P47042	667 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	ERG25	P53045	309 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	ORM1	P53224	222 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	PIN3	Q06449	215 aa		4.09	□□□□□ -1.75
PDR15	YDR406W	TPT1	Q12272	230 aa	Known RBP	4.09	□□□□□ -1.75
PDR15	YDR406W	OXA1	P39952	402 aa		4.09	□□□□□ -1.76
PDR15	YDR406W	ECO1	P43605	281 aa		4.09	□□□□□ -1.76
PDR15	YDR406W	YNR066C	P53752	436 aa		4.09	□□□□□ -1.76
PDR15	YDR406W	TY1A-DR2	Q03964	440 aa	Known RBP	4.09	□□□□□ -1.76
PDR15	YDR406W	COQ11	Q05892	277 aa		4.09	□□□□□ -1.76
PDR15	YDR406W	SNU23	Q12368	194 aa	Predicted RBP	4.09	□□□□□ -1.76
PDR15	YDR406W	YDR034W-B	Q6Q5X2	51 aa		4.09	□□□□□ -1.76
PDR15	YDR406W	Q0142	Q9ZZW4	58 aa		4.09	□□□□□ -1.76
PDR15	YDR406W	CCH1	P50077	2039 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	SGA1	P08019	549 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	HIT1	P46973	164 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	MRPS16	Q02608	121 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	FIT1	Q04433	528 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	PAL1	Q05518	499 aa	Known RBP	4.08	□□□□□ -1.76
PDR15	YDR406W	MHR1	Q06630	226 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	RXT3	Q07458	294 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	YBR298C-A	Q8TGK4	73 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	COQ2	P32378	372 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PDR15	YDR406W	YGL159W	P53110	370 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	YOR376W	Q08900	122 aa		4.08	□□□□□ -1.76
PDR15	YDR406W	GPI14	P47088	403 aa	Known RBP	4.08	□□□□□ -1.76
PDR15	YDR406W	YGL204C	P53089	101 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms