RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C YCR043CP25361 127 aa3.39□□□□□ -1.87
PRP11YDL043C YPS1P32329 569 aa3.39□□□□□ -1.87
PRP11YDL043C NUP2P32499 720 aa3.39□□□□□ -1.87
PRP11YDL043C SFC1P33303 322 aa3.39□□□□□ -1.87
PRP11YDL043C YKL162CP36052 402 aa3.39□□□□□ -1.87
PRP11YDL043C PMU1P36069 295 aa3.39□□□□□ -1.87
PRP11YDL043C YPC1P38298 316 aa3.39□□□□□ -1.87
PRP11YDL043C MTC4P38335 694 aaKnown RBP3.39□□□□□ -1.87
PRP11YDL043C YBR285WP38354 144 aa3.39□□□□□ -1.87
PRP11YDL043C CUE1P38428 203 aa3.39□□□□□ -1.87
PRP11YDL043C YHR035WP38769 630 aa3.39□□□□□ -1.87
PRP11YDL043C DOG1P38774 246 aa3.39□□□□□ -1.87
PRP11YDL043C YPT35P38815 214 aaKnown RBP3.39□□□□□ -1.87
PRP11YDL043C NSG1P38837 291 aa3.39□□□□□ -1.87
PRP11YDL043C YIL169CP40442 995 aa3.39□□□□□ -1.87
PRP11YDL043C CPR7P47103 393 aa3.39□□□□□ -1.87
PRP11YDL043C RPL9BP51401 191 aaKnown RBP3.39□□□□□ -1.87
PRP11YDL043C BRR6P53062 197 aa3.39□□□□□ -1.87
PRP11YDL043C NIF3P53081 288 aa3.39□□□□□ -1.87
PRP11YDL043C YGR168CP53293 376 aa3.39□□□□□ -1.87
PRP11YDL043C YMR181CQ03231 154 aa3.39□□□□□ -1.87
PRP11YDL043C ERP1Q05359 219 aaKnown RBP3.39□□□□□ -1.87
PRP11YDL043C YLR446WQ06204 433 aa3.39□□□□□ -1.87
PRP11YDL043C GDB1Q06625 1536 aa3.39□□□□□ -1.87
PRP11YDL043C GDH1P07262 454 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C PBI2P0CT04 75 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C RPL20AP0CX23 172 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C RPL20BP0CX24 172 aaPredicted RBP3.38□□□□□ -1.87
PRP11YDL043C CAP2P13517 287 aa3.38□□□□□ -1.87
PRP11YDL043C CUP2P15315 225 aa3.38□□□□□ -1.87
PRP11YDL043C MBA1P38300 278 aa3.38□□□□□ -1.87
PRP11YDL043C YGP1P38616 354 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C YHL044WP38727 235 aa3.38□□□□□ -1.87
PRP11YDL043C FAA2P39518 744 aa3.38□□□□□ -1.87
PRP11YDL043C PTI1P39927 425 aaPredicted RBP3.38□□□□□ -1.87
PRP11YDL043C HEM14P40012 539 aa3.38□□□□□ -1.87
PRP11YDL043C SMX2P40204 77 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C LYS12P40495 371 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C FIS1P40515 155 aa3.38□□□□□ -1.87
PRP11YDL043C YFL064CP43540 174 aa3.38□□□□□ -1.87
PRP11YDL043C YFL040WP43562 540 aa3.38□□□□□ -1.87
PRP11YDL043C IRC18P47056 224 aa3.38□□□□□ -1.87
PRP11YDL043C DAN1P47178 298 aa3.38□□□□□ -1.87
PRP11YDL043C MMS2P53152 137 aa3.38□□□□□ -1.87
PRP11YDL043C MRH4P53166 561 aa3.38□□□□□ -1.87
PRP11YDL043C PEX31P53203 462 aa3.38□□□□□ -1.87
PRP11YDL043C YNL010WP53981 241 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C SUR7P54003 302 aa3.38□□□□□ -1.87
PRP11YDL043C YMR099CQ03161 297 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C FMN1Q03778 218 aa3.38□□□□□ -1.87
PRP11YDL043C TSA2Q04120 196 aa3.38□□□□□ -1.87
PRP11YDL043C HNT1Q04344 158 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C PLB3Q08108 686 aa3.38□□□□□ -1.87
PRP11YDL043C YOR342CQ12182 319 aa3.38□□□□□ -1.87
PRP11YDL043C AYT1Q12226 474 aa3.38□□□□□ -1.87
PRP11YDL043C RPL13AQ12690 199 aaPredicted RBP3.38□□□□□ -1.87
PRP11YDL043C DET1Q99288 334 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C RPO21P04050 1733 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C UTP10P42945 1769 aaKnown RBP3.38□□□□□ -1.87
PRP11YDL043C PDR11P40550 1411 aa3.37□□□□□ -1.87
PRP11YDL043C YLR462WO13556 202 aa3.37□□□□□ -1.87
PRP11YDL043C RPL15AP05748 204 aaKnown RBP3.37□□□□□ -1.87
PRP11YDL043C CPR1P14832 162 aaKnown RBP3.37□□□□□ -1.87
PRP11YDL043C CTA1P15202 515 aa3.37□□□□□ -1.87
PRP11YDL043C ERD1P16151 362 aa3.37□□□□□ -1.87
PRP11YDL043C RPB5P20434 215 aa3.37□□□□□ -1.87
PRP11YDL043C GPI12P23797 304 aa3.37□□□□□ -1.87
PRP11YDL043C SCO1P23833 295 aa3.37□□□□□ -1.87
PRP11YDL043C MUD1P32605 298 aaKnown RBP3.37□□□□□ -1.87
PRP11YDL043C TKL2P33315 681 aa3.37□□□□□ -1.87
PRP11YDL043C SRY1P36007 326 aa3.37□□□□□ -1.87
PRP11YDL043C RPS20P38701 121 aaKnown RBP3.37□□□□□ -1.87
PRP11YDL043C YHL026CP38740 315 aa3.37□□□□□ -1.87
PRP11YDL043C YHK8P38776 514 aa3.37□□□□□ -1.87
PRP11YDL043C YER189WP40104 122 aa3.37□□□□□ -1.87
PRP11YDL043C TIF34P40217 347 aaKnown RBP3.37□□□□□ -1.87
PRP11YDL043C SWM2P40342 146 aa3.37□□□□□ -1.87
PRP11YDL043C RPR2P40571 144 aa3.37□□□□□ -1.87
PRP11YDL043C YJR012CP47087 207 aa3.37□□□□□ -1.87
PRP11YDL043C NUP57P48837 541 aa3.37□□□□□ -1.87
PRP11YDL043C SPR6Q01684 191 aa3.37□□□□□ -1.87
PRP11YDL043C SHH3Q04487 196 aa3.37□□□□□ -1.87
PRP11YDL043C SRL1Q08673 210 aa3.37□□□□□ -1.87
PRP11YDL043C YPR202WQ08993 238 aa3.37□□□□□ -1.87
PRP11YDL043C SIA1Q12212 622 aa3.37□□□□□ -1.87
PRP11YDL043C PCC1Q3E833 88 aa3.37□□□□□ -1.87
PRP11YDL043C DDP1Q99321 188 aaKnown RBP3.37□□□□□ -1.87
PRP11YDL043C KOG1P38873 1557 aa3.37□□□□□ -1.87
PRP11YDL043C ULS1Q08562 1619 aa3.37□□□□□ -1.87
PRP11YDL043C CHC1P22137 1653 aaKnown RBP3.36□□□□□ -1.87
PRP11YDL043C PAI3P01094 68 aa3.36□□□□□ -1.87
PRP11YDL043C COX4P04037 155 aa3.36□□□□□ -1.87
PRP11YDL043C SEC4P07560 215 aaKnown RBP3.36□□□□□ -1.87
PRP11YDL043C INO2P26798 304 aa3.36□□□□□ -1.87
PRP11YDL043C ATS1P31386 333 aa3.36□□□□□ -1.87
PRP11YDL043C YOR062CP36025 268 aa3.36□□□□□ -1.87
PRP11YDL043C MCR1P36060 302 aaKnown RBP3.36□□□□□ -1.87
PRP11YDL043C MIX23P38162 196 aa3.36□□□□□ -1.87
PRP11YDL043C TRM7P38238 310 aaKnown RBP3.36□□□□□ -1.87
PRP11YDL043C YBR137WP38276 179 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms