RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeast

Gene PRE7, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE7	YBL041W	CPR5	P35176	225 aa		4.11	□□□□□ -1.75
PRE7	YBL041W	YKL063C	P35725	167 aa		4.11	□□□□□ -1.75
PRE7	YBL041W	YNK1	P36010	153 aa	Known RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	ADH5	P38113	351 aa	Known RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	SMB1	P40018	196 aa	Known RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	YJL218W	P40892	196 aa	Known RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	TTI2	P47168	421 aa		4.11	□□□□□ -1.75
PRE7	YBL041W	CTF19	Q02732	369 aa		4.11	□□□□□ -1.75
PRE7	YBL041W	RPL21A	Q02753	160 aa	Known RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	PRP3	Q03338	469 aa	Predicted RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	YMR166C	Q03829	368 aa		4.11	□□□□□ -1.75
PRE7	YBL041W	VAM3	Q12241	283 aa		4.11	□□□□□ -1.75
PRE7	YBL041W	BBP1	Q12365	385 aa		4.11	□□□□□ -1.75
PRE7	YBL041W	RPL21B	Q12672	160 aa	Known RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	BGL2	P15703	313 aa	Known RBP	4.1	□□□□□ -1.75
PRE7	YBL041W	ATG22	P25568	528 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	ARO7	P32178	256 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	YBL010C	P32788	280 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	FMP23	P38231	175 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	ICS2	P38284	255 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	PCL6	P40038	420 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	RTT105	P40063	208 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	SYS1	P41544	203 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	GWT1	P47026	490 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	YJR096W	P47137	282 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	EFM3	P47163	339 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	HSK3	P69852	69 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	YMR130W	Q04223	302 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	GPN3	Q06543	272 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	TIR4	Q12218	487 aa	Predicted RBP	4.1	□□□□□ -1.75
PRE7	YBL041W	YGR035W-A	Q45U48	73 aa		4.1	□□□□□ -1.75
PRE7	YBL041W	HIS3	P06633	220 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YER190C-B	P0CX94	160 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YEL077W-A	P0CX95	160 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YGR296C-B	P0CX96	160 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YPL283W-B	P0CX97	160 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YPR204C-A	P0CX98	160 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YFL068W	P0CX99	160 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YLL066W-A	P0CY00	160 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YLL067W-A	P0CY01	160 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	CBT1	P36038	271 aa	Predicted RBP	4.09	□□□□□ -1.75
PRE7	YBL041W	ECM31	P38122	312 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	NTC20	P38302	140 aa	Predicted RBP	4.09	□□□□□ -1.75
PRE7	YBL041W	PSD1	P39006	500 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	GPI14	P47088	403 aa	Known RBP	4.09	□□□□□ -1.75
PRE7	YBL041W	BXI1	P48558	297 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YDL186W	P48568	277 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	YDL183C	P48569	320 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	RBL2	P48606	106 aa	Known RBP	4.09	□□□□□ -1.75
PRE7	YBL041W	TMA20	P89886	181 aa	Predicted RBP	4.09	□□□□□ -1.75
PRE7	YBL041W	SRL4	Q03085	281 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	TDA1	Q03533	586 aa		4.09	□□□□□ -1.75
PRE7	YBL041W	HNT1	Q04344	158 aa	Known RBP	4.09	□□□□□ -1.75
PRE7	YBL041W	NOC4	Q06512	552 aa	Predicted RBP	4.09	□□□□□ -1.75
PRE7	YBL041W	RAD52	P06778	471 aa	Known RBP	4.08	□□□□□ -1.76
PRE7	YBL041W	CHO1	P08456	276 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	VMA5	P31412	392 aa	Known RBP	4.08	□□□□□ -1.76
PRE7	YBL041W	ERG3	P32353	365 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	VAM7	P32912	316 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	YCR041W	P37265	110 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	YPT10	P38146	199 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	FIG1	P38224	298 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	PRM5	P40476	318 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	BUD25	P85052	153 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	STD1	Q02794	444 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	MIX17	Q03667	156 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	ATG41	Q12048	136 aa		4.08	□□□□□ -1.76
PRE7	YBL041W	ILV5	P06168	395 aa	Known RBP	4.07	□□□□□ -1.76
PRE7	YBL041W	RPS18A	P0CX55	146 aa	Known RBP	4.07	□□□□□ -1.76
PRE7	YBL041W	RPS18B	P0CX56	146 aa	Predicted RBP	4.07	□□□□□ -1.76
PRE7	YBL041W	PHO85	P17157	305 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	TOM40	P23644	387 aa	Known RBP	4.07	□□□□□ -1.76
PRE7	YBL041W	RPL24B	P24000	155 aa	Known RBP	4.07	□□□□□ -1.76
PRE7	YBL041W	IFM1	P25038	676 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	OCH1	P31755	480 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	PMU1	P36069	295 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	SWD3	P38123	315 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	CUE1	P38428	203 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	YGL262W	P53054	175 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	SPO19	Q03029	223 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	FIT1	Q04433	528 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	MRPL35	Q06678	367 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	MDM36	Q06820	579 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	CRC1	Q12289	327 aa		4.07	□□□□□ -1.76
PRE7	YBL041W	YLL053C	P0CD98	152 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	URA6	P15700	204 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	DPB2	P24482	689 aa	Predicted RBP	4.06	□□□□□ -1.76
PRE7	YBL041W	NOP16	P40007	231 aa	Known RBP	4.06	□□□□□ -1.76
PRE7	YBL041W	IES5	P40060	125 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	YIL060W	P40519	144 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	ATG18	P43601	500 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	YJL118W	P47022	219 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	YJR056C	P47115	236 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	DIE2	P50076	525 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	VHT1	P53241	593 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	YDR286C	Q05530	114 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	ARR3	Q06598	404 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	DGK1	Q12382	290 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	TFC7	Q12415	435 aa		4.06	□□□□□ -1.76
PRE7	YBL041W	YOR192C-C	Q3E736	78 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms