RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W OKP1P53298 406 aa12.27□□□□□ -0.45
SHR5YOL110W YNL046WP53956 172 aa12.27□□□□□ -0.45
SHR5YOL110W TIM10P87108 93 aa12.27□□□□□ -0.45
SHR5YOL110W GMC1Q04399 608 aa12.27□□□□□ -0.45
SHR5YOL110W SCP1Q08873 200 aa12.27□□□□□ -0.45
SHR5YOL110W RPL39P04650 51 aa12.26□□□□□ -0.45
SHR5YOL110W EDS1P38073 919 aa12.26□□□□□ -0.45
SHR5YOL110W OSH7P38755 437 aa12.26□□□□□ -0.45
SHR5YOL110W GON7P46984 123 aa12.26□□□□□ -0.45
SHR5YOL110W BNA2P47125 453 aa12.26□□□□□ -0.45
SHR5YOL110W SMX3P54999 86 aaPredicted RBP12.26□□□□□ -0.45
SHR5YOL110W NGL2Q03264 515 aaKnown RBP12.26□□□□□ -0.45
SHR5YOL110W YDR286CQ05530 114 aa12.26□□□□□ -0.45
SHR5YOL110W SRL3P36167 246 aa12.25□□□□□ -0.45
SHR5YOL110W POP8P38208 133 aa12.25□□□□□ -0.45
SHR5YOL110W GAT2P40209 560 aa12.25□□□□□ -0.45
SHR5YOL110W SOL1P50278 321 aa12.25□□□□□ -0.45
SHR5YOL110W CAB5Q03941 241 aa12.25□□□□□ -0.45
SHR5YOL110W YDR114CQ04597 100 aa12.25□□□□□ -0.45
SHR5YOL110W LIP2Q06005 328 aa12.25□□□□□ -0.45
SHR5YOL110W GAL1P04385 528 aa12.24□□□□□ -0.45
SHR5YOL110W ARG80P07249 177 aa12.24□□□□□ -0.45
SHR5YOL110W YCR016WP25617 290 aaKnown RBP12.24□□□□□ -0.45
SHR5YOL110W SWD3P38123 315 aa12.24□□□□□ -0.45
SHR5YOL110W BMT5P40493 336 aa12.24□□□□□ -0.45
SHR5YOL110W SLX9P53251 210 aaPredicted RBP12.24□□□□□ -0.45
SHR5YOL110W PRM4Q12498 284 aa12.24□□□□□ -0.45
SHR5YOL110W NTC20P38302 140 aaPredicted RBP12.23□□□□□ -0.45
SHR5YOL110W COS8P38723 381 aa12.23□□□□□ -0.45
SHR5YOL110W CAC2Q04199 468 aa12.23□□□□□ -0.45
SHR5YOL110W FRE8Q12209 686 aa12.23□□□□□ -0.45
SHR5YOL110W WSC3Q12215 556 aa12.23□□□□□ -0.45
SHR5YOL110W YLR365WQ7LIF2 110 aa12.23□□□□□ -0.45
SHR5YOL110W CKA1P15790 372 aa12.22□□□□□ -0.45
SHR5YOL110W SEN2P16658 377 aa12.22□□□□□ -0.45
SHR5YOL110W UTP30P36144 274 aaKnown RBP12.22□□□□□ -0.45
SHR5YOL110W LAG1P38703 411 aa12.22□□□□□ -0.45
SHR5YOL110W VAM3Q12241 283 aa12.22□□□□□ -0.45
SHR5YOL110W VMA3P25515 160 aa12.21□□□□□ -0.45
SHR5YOL110W SUA5P32579 426 aa12.21□□□□□ -0.45
SHR5YOL110W RRF1P38771 230 aa12.21□□□□□ -0.45
SHR5YOL110W AIM46P38885 310 aa12.21□□□□□ -0.45
SHR5YOL110W BFR1P38934 470 aaKnown RBP RIP-Chip data12.21□□□□□ -0.45not detected
SHR5YOL110W GLR1P41921 483 aaKnown RBP12.21□□□□□ -0.45
SHR5YOL110W TMC1Q08422 150 aaPredicted RBP12.21□□□□□ -0.45
SHR5YOL110W TFB5Q3E7C1 72 aaPredicted RBP12.21□□□□□ -0.45
SHR5YOL110W TRR1P29509 319 aaKnown RBP12.2□□□□□ -0.46
SHR5YOL110W VMA8P32610 256 aaKnown RBP12.2□□□□□ -0.46
SHR5YOL110W RPB7P34087 171 aa12.2□□□□□ -0.46
SHR5YOL110W SLM1P40485 686 aa12.2□□□□□ -0.46
SHR5YOL110W TEX1P53851 422 aaKnown RBP12.2□□□□□ -0.46
SHR5YOL110W NRG1Q03125 231 aa12.2□□□□□ -0.46
SHR5YOL110W FIT1Q04433 528 aa12.2□□□□□ -0.46
SHR5YOL110W RTT103Q05543 409 aa12.2□□□□□ -0.46
SHR5YOL110W YOR192C-CQ3E736 78 aa12.2□□□□□ -0.46
SHR5YOL110W FUS3P16892 353 aaKnown RBP12.19□□□□□ -0.46
SHR5YOL110W MIR1P23641 311 aaKnown RBP12.19□□□□□ -0.46
SHR5YOL110W YGR210CP42942 411 aa12.19□□□□□ -0.46
SHR5YOL110W NIF3P53081 288 aa12.19□□□□□ -0.46
SHR5YOL110W PEF1P53238 335 aa12.19□□□□□ -0.46
SHR5YOL110W TSA2Q04120 196 aa12.19□□□□□ -0.46
SHR5YOL110W PUT1P09368 476 aa12.18□□□□□ -0.46
SHR5YOL110W SWD2P36104 329 aaPredicted RBP12.18□□□□□ -0.46
SHR5YOL110W PRM5P40476 318 aa12.18□□□□□ -0.46
SHR5YOL110W SGN1P40561 250 aaKnown RBP RIP-Chip data12.18□□□□□ -0.46not detected
SHR5YOL110W XPT1P47165 209 aa12.18□□□□□ -0.46
SHR5YOL110W UBP8P50102 471 aa12.18□□□□□ -0.46
SHR5YOL110W SBH2P52871 88 aa12.18□□□□□ -0.46
SHR5YOL110W HSK3P69852 69 aa12.18□□□□□ -0.46
SHR5YOL110W FEX2Q08991 375 aa12.18□□□□□ -0.46
SHR5YOL110W RFM1Q12192 310 aa12.18□□□□□ -0.46
SHR5YOL110W BBP1Q12365 385 aa12.18□□□□□ -0.46
SHR5YOL110W CTR2P38865 189 aa12.17□□□□□ -0.46
SHR5YOL110W RPA34P47006 233 aaPredicted RBP12.17□□□□□ -0.46
SHR5YOL110W MEH1Q02205 184 aa12.17□□□□□ -0.46
SHR5YOL110W THI74Q04083 370 aa12.17□□□□□ -0.46
SHR5YOL110W SPO24Q3E752 67 aa12.17□□□□□ -0.46
SHR5YOL110W YBL029C-AQ3E756 94 aa12.17□□□□□ -0.46
SHR5YOL110W YPR108W-AQ3E7B3 70 aa12.17□□□□□ -0.46
SHR5YOL110W YUH1P35127 236 aa12.16□□□□□ -0.46
SHR5YOL110W YHL044WP38727 235 aa12.16□□□□□ -0.46
SHR5YOL110W PAC2P39937 518 aa12.16□□□□□ -0.46
SHR5YOL110W GEP7P53171 287 aa12.16□□□□□ -0.46
SHR5YOL110W DPB4Q04603 196 aaKnown RBP12.16□□□□□ -0.46
SHR5YOL110W NOC4Q06512 552 aaPredicted RBP12.16□□□□□ -0.46
SHR5YOL110W OLE1P21147 510 aaKnown RBP12.15□□□□□ -0.46
SHR5YOL110W ACB1P31787 87 aa12.15□□□□□ -0.46
SHR5YOL110W POP2P39008 433 aa12.15□□□□□ -0.46
SHR5YOL110W YER137CP40083 148 aaKnown RBP12.15□□□□□ -0.46
SHR5YOL110W PIR5P46999 287 aa12.15□□□□□ -0.46
SHR5YOL110W MRPL50P53724 139 aa12.15□□□□□ -0.46
SHR5YOL110W ECM18Q04623 453 aa12.15□□□□□ -0.46
SHR5YOL110W RIM9Q04734 239 aa12.15□□□□□ -0.46
SHR5YOL110W SNA4Q07549 140 aa12.15□□□□□ -0.46
SHR5YOL110W YOL118CQ08259 102 aa12.15□□□□□ -0.46
SHR5YOL110W TPI1P00942 248 aaKnown RBP12.14□□□□□ -0.47
SHR5YOL110W QCR2P07257 368 aa12.14□□□□□ -0.47
SHR5YOL110W IRC24P40580 263 aa12.14□□□□□ -0.47
SHR5YOL110W YNR064CP53750 290 aa12.14□□□□□ -0.47
SHR5YOL110W DGK1Q12382 290 aa12.14□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms