RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	SLO1	Q3E784	85 aa		5.09	□□□□□ -1.6
DBP9	YLR276C	IZH4	Q99393	312 aa		5.09	□□□□□ -1.6
DBP9	YLR276C	GSC2	P40989	1895 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	TFS1	P14306	219 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	SLM5	P25345	492 aa	Known RBP	5.08	□□□□□ -1.6
DBP9	YLR276C	YCR099C	P25657	155 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	ARO2	P28777	376 aa	Known RBP	5.08	□□□□□ -1.6
DBP9	YLR276C	COX13	P32799	129 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	BNA4	P38169	460 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	AME1	P38313	324 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	URA8	P38627	578 aa	Predicted RBP	5.08	□□□□□ -1.6
DBP9	YLR276C	RPF1	P38805	295 aa	Known RBP	5.08	□□□□□ -1.6
DBP9	YLR276C	CHL4	P38907	458 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	PFS2	P42841	465 aa	Known RBP	5.08	□□□□□ -1.6
DBP9	YLR276C	RPN14	P53196	417 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	YGR126W	P53274	230 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	AQR1	P53943	586 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	SLG1	P54867	378 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	RSM10	Q03201	203 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	ERP1	Q05359	219 aa	Known RBP	5.08	□□□□□ -1.6
DBP9	YLR276C	CTR3	Q06686	241 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	BER1	Q06688	274 aa	Known RBP	5.08	□□□□□ -1.6
DBP9	YLR276C	HEM25	Q07534	307 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	PST1	Q12355	444 aa		5.08	□□□□□ -1.6
DBP9	YLR276C	HIS1	P00498	297 aa	Known RBP	5.07	□□□□□ -1.6
DBP9	YLR276C	CDC36	P06100	191 aa	Predicted RBP	5.07	□□□□□ -1.6
DBP9	YLR276C	GDH1	P07262	454 aa	Known RBP	5.07	□□□□□ -1.6
DBP9	YLR276C	CHO1	P08456	276 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	LSB5	P25369	354 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	PUT3	P25502	979 aa	Predicted RBP	5.07	□□□□□ -1.6
DBP9	YLR276C	ZTA1	P38230	334 aa	Known RBP	5.07	□□□□□ -1.6
DBP9	YLR276C	ICS2	P38284	255 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	PTH1	P38876	190 aa	Known RBP	5.07	□□□□□ -1.6
DBP9	YLR276C	VHS2	P40463	436 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	AYR1	P40471	297 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	FMC1	P40491	155 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	RRT5	P43607	289 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	YIF1	P53845	314 aa	Known RBP	5.07	□□□□□ -1.6
DBP9	YLR276C	YML018C	Q03730	393 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	KEI1	Q06346	221 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	BSC6	Q08280	497 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	NRT1	Q08485	598 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	RPS10A	Q08745	105 aa	Predicted RBP	5.07	□□□□□ -1.6
DBP9	YLR276C	YLR118C	Q12354	227 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	SNF8	Q12483	233 aa		5.07	□□□□□ -1.6
DBP9	YLR276C	YLR358C	O13565	187 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	UBI4	P0CG63	381 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	RPL40A	P0CH08	128 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	RPL40B	P0CH09	128 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	TIP1	P27654	210 aa	Predicted RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	GLC7	P32598	312 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	YUH1	P35127	236 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	LDB7	P38210	180 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	ARP1	P38696	384 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	LYS12	P40495	371 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	RPS10B	P46784	105 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	ATG27	P46989	271 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	ERG26	P53199	349 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	IBD2	P53892	351 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	SMX3	P54999	86 aa	Predicted RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	BNA5	Q05979	453 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	YFH1	Q07540	174 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	YLR040C	Q07988	224 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	BSC1	Q12140	328 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	ZPS1	Q12512	249 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	YLR099W-A	Q3E798	87 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	SAL1	D6W196	494 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	YOR304C-A	O14468	76 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	MES1	P00958	751 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	ILV5	P06168	395 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	EXG1	P23776	448 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	POP5	P28005	173 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	RPL32	P38061	130 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	QDR3	P38227	689 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	YHR210C	P38893	341 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	PRP39	P39682	629 aa	Known RBP	5.06	□□□□□ -1.6
DBP9	YLR276C	BNS1	P50084	137 aa		5.06	□□□□□ -1.6
DBP9	YLR276C	NCE102	Q12207	173 aa	RIP-Chip data	5.06	□□□□□ -1.6	not detected
DBP9	YLR276C	PBN1	P25580	416 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	TIP20	P33891	701 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	SHE1	P38200	338 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	YHR177W	P38867	453 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	HEM14	P40012	539 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	MGA1	P53050	456 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	RSM23	Q01163	450 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	NOC4	Q06512	552 aa	Predicted RBP	5.05	□□□□□ -1.6
DBP9	YLR276C	YLR030W	Q07967	263 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	YLR036C	Q07986	203 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	BTS1	Q12051	335 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	FRE8	Q12209	686 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	PRR2	Q12310	699 aa		5.05	□□□□□ -1.6
DBP9	YLR276C	STT4	P37297	1900 aa		5.04	□□□□□ -1.6
DBP9	YLR276C	RAS2	P01120	322 aa	Known RBP	5.04	□□□□□ -1.6
DBP9	YLR276C	MSW1	P04803	379 aa		5.04	□□□□□ -1.6
DBP9	YLR276C	PAU19	P0CE85	124 aa		5.04	□□□□□ -1.6
DBP9	YLR276C	PAU21	P0CE86	164 aa		5.04	□□□□□ -1.6
DBP9	YLR276C	PAU22	P0CE87	164 aa		5.04	□□□□□ -1.6
DBP9	YLR276C	PAU3	P25610	124 aa		5.04	□□□□□ -1.6
DBP9	YLR276C	UTR5	P32630	166 aa		5.04	□□□□□ -1.6
DBP9	YLR276C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms