RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	RIO2	P40160	425 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	YNL194C	P40169	301 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	NAS2	P40555	220 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	COQ5	P49017	307 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	TRM9	P49957	279 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	ERG25	P53045	309 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	YGL235W	P53071	178 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	GET1	P53192	235 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	HHO1	P53551	258 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	FMP41	P53889	259 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	RRG8	Q06109	277 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	SPO77	Q06134	477 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	YPL245W	Q12179	454 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	YOR029W	Q12243	111 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	YLR046C	Q12253	270 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	MRX4	Q12467	430 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	QCR7	P00128	127 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	TPI1	P00942	248 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	PBI2	P0CT04	75 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	ERG2	P32352	222 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	FMT1	P32785	401 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	RIB1	P38066	345 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	GPX2	P38143	162 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	YSW1	P38280	609 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	YKE4	P40544	346 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	CIS3	P47001	227 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	YJR056C	P47115	236 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	MIG2	P53035	382 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	UFD1	P53044	361 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	YPS5	P53057	165 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	MDM34	P53083	459 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	RPN14	P53196	417 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	TRM44	Q02648	567 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	VPS28	Q02767	242 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	YHC1	Q05900	231 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	SEI1	Q06058	285 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	SFH1	Q06168	426 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	GAT3	Q07928	141 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	UIP4	Q08926	304 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	DFM1	Q12743	341 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	RPS3	P05750	240 aa	Known RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	RPS24A	P0CX31	135 aa	Known RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	RPS24B	P0CX32	135 aa	Known RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	PBN1	P25580	416 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	SPS18	P32572	300 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	MRPL15	P36523	253 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	ECM13	P38195	257 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	TRR2	P38816	342 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	CHL4	P38907	458 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	PRM10	P42946	383 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	YGR164W	P53291	111 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	RTC4	P53850	401 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	SPO19	Q03029	223 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	RAV2	Q03956	351 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	YDR278C	Q05612	105 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	GRX8	Q05926	109 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	HTL1	Q9URQ5	78 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	RPL9A	P05738	191 aa	Known RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	FRS2	P15625	503 aa	Known RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	DPB2	P24482	689 aa	Predicted RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	CDC10	P25342	322 aa	Known RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	TAH1	P25638	111 aa	Predicted RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	PMT2	P31382	759 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	VAM7	P32912	316 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	MBA1	P38300	278 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	YHR035W	P38769	630 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	STN1	P38960	494 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	YER188W	P40103	239 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	AGP3	P43548	558 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	RPL9B	P51401	191 aa	Known RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	YDR124W	Q04608	324 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	RPN8	Q08723	338 aa	Known RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	PGC1	Q08959	321 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	FCY1	Q12178	158 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	SAL1	D6W196	494 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	TFS1	P14306	219 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	SRL3	P36167	246 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	BIG1	P38813	335 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	YHR177W	P38867	453 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	CTK3	P46963	296 aa	Predicted RBP	0.66	□□□□□ -2.3
PRP16	YKR086W	SNX4	P47057	423 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	YPL077C	Q02831	240 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	YMR295C	Q03559	197 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	COX20	Q04935	205 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	YLR283W	Q05867	314 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	DCR2	Q05924	578 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	GRE1	Q08969	168 aa		0.66	□□□□□ -2.3
PRP16	YKR086W	CDC8	P00572	216 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	RAD1	P06777	1100 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	DAP2	P18962	818 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	ALK2	P32789	676 aa	Predicted RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	GDH2	P33327	1092 aa	Known RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	TVP38	P36164	337 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	TRS20	P38334	175 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	ARN2	P38724	620 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	GGC1	P38988	300 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	PFS2	P42841	465 aa	Known RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	SAY1	P53324	424 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	PRP38	Q00723	242 aa	Predicted RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	YML096W	Q04489	525 aa		0.65	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms