RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C ILM1P47155 203 aa1.16□□□□□ -2.22
AFR1YDR085C YOL107WQ12239 342 aa1.16□□□□□ -2.22
AFR1YDR085C RPL13AQ12690 199 aaPredicted RBP1.16□□□□□ -2.22
AFR1YDR085C CDC8P00572 216 aa1.15□□□□□ -2.23
AFR1YDR085C YMR144WP40214 342 aaKnown RBP1.15□□□□□ -2.23
AFR1YDR085C TIR3P40552 269 aa1.15□□□□□ -2.23
AFR1YDR085C HOC1P47124 396 aa1.15□□□□□ -2.23
AFR1YDR085C YLR126CQ12288 251 aa1.15□□□□□ -2.23
AFR1YDR085C YML096WQ04489 525 aa1.14□□□□□ -2.23
AFR1YDR085C ICE2P40499 491 aa1.14□□□□□ -2.23
AFR1YDR085C GPI8P49018 411 aa1.14□□□□□ -2.23
AFR1YDR085C BOL2P53082 120 aa1.14□□□□□ -2.23
AFR1YDR085C SSQ1Q05931 657 aaPredicted RBP1.14□□□□□ -2.23
AFR1YDR085C RIB1P38066 345 aa1.13□□□□□ -2.23
AFR1YDR085C ABF2Q02486 183 aa1.13□□□□□ -2.23
AFR1YDR085C TRM12Q04235 462 aa1.13□□□□□ -2.23
AFR1YDR085C SPG3Q04398 127 aaPredicted RBP1.13□□□□□ -2.23
AFR1YDR085C ERV29P53337 310 aa1.12□□□□□ -2.23
AFR1YDR085C ATG31Q12421 196 aa1.12□□□□□ -2.23
AFR1YDR085C PSF1Q12488 208 aa1.12□□□□□ -2.23
AFR1YDR085C RPL27BP0C2H7 136 aaKnown RBP1.12□□□□□ -2.23
AFR1YDR085C VPS21P36017 210 aaKnown RBP1.12□□□□□ -2.23
AFR1YDR085C PGD1P40356 397 aa1.12□□□□□ -2.23
AFR1YDR085C YJR149WP47177 404 aa1.12□□□□□ -2.23
AFR1YDR085C RRT8Q08219 342 aa1.12□□□□□ -2.23
AFR1YDR085C RIO1Q12196 484 aaKnown RBP1.12□□□□□ -2.23
AFR1YDR085C PEX17P40155 199 aa1.11□□□□□ -2.23
AFR1YDR085C BNA6P43619 295 aa1.11□□□□□ -2.23
AFR1YDR085C PAM18Q07914 168 aa1.11□□□□□ -2.23
AFR1YDR085C FZF1P32805 299 aa1.1□□□□□ -2.23
AFR1YDR085C YNL010WP53981 241 aaKnown RBP1.1□□□□□ -2.23
AFR1YDR085C KRE28Q04431 385 aa1.1□□□□□ -2.23
AFR1YDR085C GPA2P10823 449 aa1.09□□□□□ -2.23
AFR1YDR085C IRC22P40006 225 aa1.09□□□□□ -2.23
AFR1YDR085C YNL217WP40152 326 aa1.09□□□□□ -2.23
AFR1YDR085C YRB2P40517 327 aa1.09□□□□□ -2.23
AFR1YDR085C MCM22P47167 239 aa1.09□□□□□ -2.23
AFR1YDR085C AIF1P52923 378 aa1.09□□□□□ -2.23
AFR1YDR085C YNL134CP53912 376 aaKnown RBP1.09□□□□□ -2.23
AFR1YDR085C DID2P69771 204 aa1.09□□□□□ -2.23
AFR1YDR085C REP2P03872 296 aa1.09□□□□□ -2.24
AFR1YDR085C YPR170W-BP0C5R9 85 aa1.09□□□□□ -2.24
AFR1YDR085C SRB4P32569 687 aa1.09□□□□□ -2.24
AFR1YDR085C YUH1P35127 236 aa1.09□□□□□ -2.24
AFR1YDR085C MRPL50P53724 139 aa1.09□□□□□ -2.24
AFR1YDR085C YLR173WQ06247 608 aa1.09□□□□□ -2.24
AFR1YDR085C RPO26P20435 155 aa1.07□□□□□ -2.24
AFR1YDR085C TMA19P35691 167 aaKnown RBP1.07□□□□□ -2.24
AFR1YDR085C TCD1P38756 429 aa1.07□□□□□ -2.24
AFR1YDR085C TRM9P49957 279 aa1.07□□□□□ -2.24
AFR1YDR085C DOC1P53068 250 aa1.07□□□□□ -2.24
AFR1YDR085C QCR8P08525 94 aa1.07□□□□□ -2.24
AFR1YDR085C URA8P38627 578 aaPredicted RBP1.07□□□□□ -2.24
AFR1YDR085C GAA1P39012 614 aa1.07□□□□□ -2.24
AFR1YDR085C YMD8Q03697 442 aa1.07□□□□□ -2.24
AFR1YDR085C CPA1P07258 411 aaKnown RBP1.06□□□□□ -2.24
AFR1YDR085C SRL4Q03085 281 aa1.06□□□□□ -2.24
AFR1YDR085C YML108WQ03759 105 aa1.06□□□□□ -2.24
AFR1YDR085C LPP1Q04396 274 aa1.06□□□□□ -2.24
AFR1YDR085C BCY1P07278 416 aaKnown RBP1.05□□□□□ -2.24
AFR1YDR085C MRPL25P23369 157 aa1.05□□□□□ -2.24
AFR1YDR085C NTF2P33331 125 aaKnown RBP1.05□□□□□ -2.24
AFR1YDR085C DOG2P38773 246 aa1.05□□□□□ -2.24
AFR1YDR085C MPA43P53583 542 aaPredicted RBP1.05□□□□□ -2.24
AFR1YDR085C YNR077CP53758 84 aa1.05□□□□□ -2.24
AFR1YDR085C MRPS28P21771 286 aa1.05□□□□□ -2.24
AFR1YDR085C LDB7P38210 180 aa1.05□□□□□ -2.24
AFR1YDR085C CUE1P38428 203 aa1.05□□□□□ -2.24
AFR1YDR085C NUP57P48837 541 aa1.05□□□□□ -2.24
AFR1YDR085C NUP84P52891 726 aa1.05□□□□□ -2.24
AFR1YDR085C ANT1Q06497 328 aa1.05□□□□□ -2.24
AFR1YDR085C LSO2Q3E772 92 aaKnown RBP1.05□□□□□ -2.24
AFR1YDR085C PDR18P53756 1333 aa1.05□□□□□ -2.24
AFR1YDR085C YLR156WP0CE96 114 aa1.04□□□□□ -2.24
AFR1YDR085C YLR159WP0CE97 114 aa1.04□□□□□ -2.24
AFR1YDR085C YLR161WP0CE98 114 aa1.04□□□□□ -2.24
AFR1YDR085C YET1P35723 206 aa1.04□□□□□ -2.24
AFR1YDR085C NSA1P53136 463 aaPredicted RBP1.04□□□□□ -2.24
AFR1YDR085C YPL162CQ12042 273 aa1.04□□□□□ -2.24
AFR1YDR085C VAR1P02381 398 aa1.03□□□□□ -2.24
AFR1YDR085C SPT3P06844 337 aa1.03□□□□□ -2.24
AFR1YDR085C CDC10P25342 322 aaKnown RBP1.03□□□□□ -2.24
AFR1YDR085C ATG22P25568 528 aa1.03□□□□□ -2.24
AFR1YDR085C MED4Q12343 284 aa1.03□□□□□ -2.24
AFR1YDR085C INO80P53115 1489 aa1.03□□□□□ -2.24
AFR1YDR085C SRY1P36007 326 aa1.03□□□□□ -2.25
AFR1YDR085C UMP1P38293 148 aa1.03□□□□□ -2.25
AFR1YDR085C POP4P38336 279 aa1.03□□□□□ -2.25
AFR1YDR085C FMC1P40491 155 aa1.03□□□□□ -2.25
AFR1YDR085C UBC7Q02159 165 aa1.03□□□□□ -2.25
AFR1YDR085C SNZ1Q03148 297 aa1.03□□□□□ -2.25
AFR1YDR085C MET5P47169 1442 aa1.02□□□□□ -2.25
AFR1YDR085C YER076CP40049 302 aa1.02□□□□□ -2.25
AFR1YDR085C SAY1P53324 424 aa1.02□□□□□ -2.25
AFR1YDR085C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
AFR1YDR085C SWP1Q02795 286 aa1.02□□□□□ -2.25
AFR1YDR085C MRPL28P36527 147 aa1.01□□□□□ -2.25
AFR1YDR085C MRPL17P36528 281 aa1.01□□□□□ -2.25
AFR1YDR085C POP3P53833 195 aaPredicted RBP1.01□□□□□ -2.25
AFR1YDR085C NOP13P53883 403 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms