RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C CDC8P00572 216 aa1.72□□□□□ -2.13
YDR034C-CYDR034C-C RPS5P26783 225 aaKnown RBP1.72□□□□□ -2.13
YDR034C-CYDR034C-C HOC1P47124 396 aa1.72□□□□□ -2.13
YDR034C-CYDR034C-C YNL134CP53912 376 aaKnown RBP1.72□□□□□ -2.13
YDR034C-CYDR034C-C MZM1Q03429 123 aaPredicted RBP1.72□□□□□ -2.13
YDR034C-CYDR034C-C CSI2Q08054 341 aa1.72□□□□□ -2.13
YDR034C-CYDR034C-C YBR220CP38318 560 aa1.71□□□□□ -2.14
YDR034C-CYDR034C-C NUP49Q02199 472 aa1.71□□□□□ -2.14
YDR034C-CYDR034C-C YMD8Q03697 442 aa1.71□□□□□ -2.14
YDR034C-CYDR034C-C YML108WQ03759 105 aa1.71□□□□□ -2.14
YDR034C-CYDR034C-C MED4Q12343 284 aa1.71□□□□□ -2.14
YDR034C-CYDR034C-C CYR1P08678 2026 aaKnown RBP1.71□□□□□ -2.14
YDR034C-CYDR034C-C FPR1P20081 114 aaKnown RBP1.7□□□□□ -2.14
YDR034C-CYDR034C-C CUE1P38428 203 aa1.7□□□□□ -2.14
YDR034C-CYDR034C-C TIR3P40552 269 aa1.7□□□□□ -2.14
YDR034C-CYDR034C-C PGD1P40356 397 aa1.69□□□□□ -2.14
YDR034C-CYDR034C-C ATG31Q12421 196 aa1.69□□□□□ -2.14
YDR034C-CYDR034C-C YPR170W-BP0C5R9 85 aa1.68□□□□□ -2.14
YDR034C-CYDR034C-C MRPL25P23369 157 aa1.68□□□□□ -2.14
YDR034C-CYDR034C-C MEI4P29467 408 aa1.68□□□□□ -2.14
YDR034C-CYDR034C-C RPT5P33297 434 aaKnown RBP1.68□□□□□ -2.14
YDR034C-CYDR034C-C GLE2P40066 365 aa1.68□□□□□ -2.14
YDR034C-CYDR034C-C AIF1P52923 378 aa1.68□□□□□ -2.14
YDR034C-CYDR034C-C YLR162WQ06235 118 aa1.68□□□□□ -2.14
YDR034C-CYDR034C-C YPL229WQ99395 206 aa1.68□□□□□ -2.14
YDR034C-CYDR034C-C RPL13BP40212 199 aaKnown RBP1.67□□□□□ -2.14
YDR034C-CYDR034C-C ICE2P40499 491 aa1.67□□□□□ -2.14
YDR034C-CYDR034C-C MCM22P47167 239 aa1.67□□□□□ -2.14
YDR034C-CYDR034C-C NSA1P53136 463 aaPredicted RBP1.67□□□□□ -2.14
YDR034C-CYDR034C-C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
YDR034C-CYDR034C-C RPL13AQ12690 199 aaPredicted RBP1.67□□□□□ -2.14
YDR034C-CYDR034C-C PEX17P40155 199 aa1.66□□□□□ -2.14
YDR034C-CYDR034C-C RPL2AP0CX45 254 aaKnown RBP1.66□□□□□ -2.14
YDR034C-CYDR034C-C RPL2BP0CX46 254 aaKnown RBP1.66□□□□□ -2.14
YDR034C-CYDR034C-C SRB4P32569 687 aa1.66□□□□□ -2.14
YDR034C-CYDR034C-C TRM9P49957 279 aa1.66□□□□□ -2.14
YDR034C-CYDR034C-C NUP84P52891 726 aa1.66□□□□□ -2.14
YDR034C-CYDR034C-C SRL4Q03085 281 aa1.66□□□□□ -2.14
YDR034C-CYDR034C-C PSF1Q12488 208 aa1.66□□□□□ -2.14
YDR034C-CYDR034C-C LSO2Q3E772 92 aaKnown RBP1.66□□□□□ -2.14
YDR034C-CYDR034C-C DRS2P39524 1355 aa1.65□□□□□ -2.15
YDR034C-CYDR034C-C INO80P53115 1489 aa1.65□□□□□ -2.15
YDR034C-CYDR034C-C FZF1P32805 299 aa1.65□□□□□ -2.15
YDR034C-CYDR034C-C YNL217WP40152 326 aa1.65□□□□□ -2.15
YDR034C-CYDR034C-C FMC1P40491 155 aa1.65□□□□□ -2.15
YDR034C-CYDR034C-C YJR149WP47177 404 aa1.65□□□□□ -2.15
YDR034C-CYDR034C-C BOL2P53082 120 aa1.65□□□□□ -2.15
YDR034C-CYDR034C-C SPG3Q04398 127 aaPredicted RBP1.65□□□□□ -2.15
YDR034C-CYDR034C-C RPL27BP0C2H7 136 aaKnown RBP1.64□□□□□ -2.15
YDR034C-CYDR034C-C MRPS28P21771 286 aa1.64□□□□□ -2.15
YDR034C-CYDR034C-C LDB7P38210 180 aa1.64□□□□□ -2.15
YDR034C-CYDR034C-C DOG2P38773 246 aa1.64□□□□□ -2.15
YDR034C-CYDR034C-C MET5P47169 1442 aa1.64□□□□□ -2.15
YDR034C-CYDR034C-C TRM12Q04235 462 aa1.64□□□□□ -2.15
YDR034C-CYDR034C-C YHR139C-AO13536 103 aa1.63□□□□□ -2.15
YDR034C-CYDR034C-C CDC10P25342 322 aaKnown RBP1.63□□□□□ -2.15
YDR034C-CYDR034C-C ATG22P25568 528 aa1.63□□□□□ -2.15
YDR034C-CYDR034C-C YNL010WP53981 241 aaKnown RBP1.63□□□□□ -2.15
YDR034C-CYDR034C-C DID2P69771 204 aa1.63□□□□□ -2.15
YDR034C-CYDR034C-C PET117Q02771 107 aa1.63□□□□□ -2.15
YDR034C-CYDR034C-C SNZ1Q03148 297 aa1.63□□□□□ -2.15
YDR034C-CYDR034C-C LPP1Q04396 274 aa1.63□□□□□ -2.15
YDR034C-CYDR034C-C RIO1Q12196 484 aaKnown RBP1.63□□□□□ -2.15
YDR034C-CYDR034C-C BCY1P07278 416 aaKnown RBP1.62□□□□□ -2.15
YDR034C-CYDR034C-C GPA2P10823 449 aa1.62□□□□□ -2.15
YDR034C-CYDR034C-C YCR016WP25617 290 aaKnown RBP1.62□□□□□ -2.15
YDR034C-CYDR034C-C QCR8P08525 94 aa1.61□□□□□ -2.15
YDR034C-CYDR034C-C UPS2P35200 230 aa1.61□□□□□ -2.15
YDR034C-CYDR034C-C TMA19P35691 167 aaKnown RBP1.61□□□□□ -2.15
YDR034C-CYDR034C-C YET1P35723 206 aa1.61□□□□□ -2.15
YDR034C-CYDR034C-C IRC22P40006 225 aa1.61□□□□□ -2.15
YDR034C-CYDR034C-C YPL162CQ12042 273 aa1.61□□□□□ -2.15
YDR034C-CYDR034C-C REP2P03872 296 aa1.6□□□□□ -2.15
YDR034C-CYDR034C-C SAY1P53324 424 aa1.6□□□□□ -2.15
YDR034C-CYDR034C-C MSN4P33749 630 aa1.59□□□□□ -2.16
YDR034C-CYDR034C-C MRPL28P36527 147 aa1.59□□□□□ -2.16
YDR034C-CYDR034C-C COX15P40086 486 aa1.59□□□□□ -2.16
YDR034C-CYDR034C-C PRM8P53174 237 aa1.59□□□□□ -2.16
YDR034C-CYDR034C-C RRN5Q02983 363 aa1.59□□□□□ -2.16
YDR034C-CYDR034C-C YDR248CQ03786 193 aa1.59□□□□□ -2.16
YDR034C-CYDR034C-C CFT1Q06632 1357 aaKnown RBP1.58□□□□□ -2.16
YDR034C-CYDR034C-C SPT3P06844 337 aa1.58□□□□□ -2.16
YDR034C-CYDR034C-C RPO26P20435 155 aa1.58□□□□□ -2.16
YDR034C-CYDR034C-C NTF2P33331 125 aaKnown RBP1.58□□□□□ -2.16
YDR034C-CYDR034C-C VPS21P36017 210 aaKnown RBP1.58□□□□□ -2.16
YDR034C-CYDR034C-C POP4P38336 279 aa1.58□□□□□ -2.16
YDR034C-CYDR034C-C URA8P38627 578 aaPredicted RBP1.58□□□□□ -2.16
YDR034C-CYDR034C-C GAA1P39012 614 aa1.58□□□□□ -2.16
YDR034C-CYDR034C-C YRB2P40517 327 aa1.58□□□□□ -2.16
YDR034C-CYDR034C-C YLR283WQ05867 314 aa1.58□□□□□ -2.16
YDR034C-CYDR034C-C YLR156WP0CE96 114 aa1.57□□□□□ -2.16
YDR034C-CYDR034C-C YLR159WP0CE97 114 aa1.57□□□□□ -2.16
YDR034C-CYDR034C-C YLR161WP0CE98 114 aa1.57□□□□□ -2.16
YDR034C-CYDR034C-C URA6P15700 204 aa1.57□□□□□ -2.16
YDR034C-CYDR034C-C SSO1P32867 290 aa1.57□□□□□ -2.16
YDR034C-CYDR034C-C SKG1P36169 355 aa1.57□□□□□ -2.16
YDR034C-CYDR034C-C DOC1P53068 250 aa1.57□□□□□ -2.16
YDR034C-CYDR034C-C TSC3Q3E790 80 aa1.57□□□□□ -2.16
YDR034C-CYDR034C-C UMP1P38293 148 aa1.56□□□□□ -2.16
YDR034C-CYDR034C-C PRE6P40303 254 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms