RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR008C	YDR008C	RPL33B	P41056	107 aa	Known RBP	0.91	□□□□□ -2.26
YDR008C	YDR008C	LIA1	P47120	325 aa	Known RBP	0.91	□□□□□ -2.26
YDR008C	YDR008C	TRM9	P49957	279 aa		0.91	□□□□□ -2.26
YDR008C	YDR008C	NUP84	P52891	726 aa		0.91	□□□□□ -2.26
YDR008C	YDR008C	BUD25	P85052	153 aa		0.91	□□□□□ -2.26
YDR008C	YDR008C	INO80	P53115	1489 aa		0.91	□□□□□ -2.26
YDR008C	YDR008C	CDC7	P06243	507 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	PET9	P18239	318 aa	Known RBP	0.9	□□□□□ -2.27
YDR008C	YDR008C	MRPS28	P21771	286 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	ATG22	P25568	528 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	SSO1	P32867	290 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	RPT5	P33297	434 aa	Known RBP	0.9	□□□□□ -2.27
YDR008C	YDR008C	YKL075C	P36083	450 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	ECM33	P38248	429 aa	Known RBP	0.9	□□□□□ -2.27
YDR008C	YDR008C	DOG2	P38773	246 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	MCM22	P47167	239 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	SRL4	Q03085	281 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	SNZ1	Q03148	297 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	ARR2	Q06597	130 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	TPO4	Q12256	659 aa		0.9	□□□□□ -2.27
YDR008C	YDR008C	LSO2	Q3E772	92 aa	Known RBP	0.9	□□□□□ -2.27
YDR008C	YDR008C	FLO9	P39712	1322 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	GRX2	P17695	143 aa	Known RBP	0.89	□□□□□ -2.27
YDR008C	YDR008C	RPS5	P26783	225 aa	Known RBP	0.89	□□□□□ -2.27
YDR008C	YDR008C	SKG1	P36169	355 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	YBR219C	P38317	127 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	YHR180W	P38868	163 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	PRE6	P40303	254 aa	Known RBP	0.89	□□□□□ -2.27
YDR008C	YDR008C	PGD1	P40356	397 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	RSM25	P40496	264 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	RPA43	P46669	326 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	AIF1	P52923	378 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	FYV6	P53913	173 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	MET5	P47169	1442 aa		0.89	□□□□□ -2.27
YDR008C	YDR008C	BCY1	P07278	416 aa	Known RBP	0.88	□□□□□ -2.27
YDR008C	YDR008C	DDI2	P0CH63	225 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	DDI3	P0CH64	225 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	MATALPHA1	P0CY06	175 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	HMLALPHA1	P0CY07	175 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	URA6	P15700	204 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	RPL24B	P24000	155 aa	Known RBP	0.88	□□□□□ -2.27
YDR008C	YDR008C	PPA2	P28239	310 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	VPS21	P36017	210 aa	Known RBP	0.88	□□□□□ -2.27
YDR008C	YDR008C	PEX17	P40155	199 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	TIR3	P40552	269 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	TOS8	P53147	276 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	SML1	Q04964	104 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	UBR2	Q07963	1872 aa		0.88	□□□□□ -2.27
YDR008C	YDR008C	RPL28	P02406	149 aa	Known RBP	0.87	□□□□□ -2.27
YDR008C	YDR008C	MRPL28	P36527	147 aa		0.87	□□□□□ -2.27
YDR008C	YDR008C	TCD1	P38756	429 aa		0.87	□□□□□ -2.27
YDR008C	YDR008C	YNL217W	P40152	326 aa		0.87	□□□□□ -2.27
YDR008C	YDR008C	SAY1	P53324	424 aa		0.87	□□□□□ -2.27
YDR008C	YDR008C	LPP1	Q04396	274 aa		0.87	□□□□□ -2.27
YDR008C	YDR008C	CDC123	Q05791	360 aa		0.87	□□□□□ -2.27
YDR008C	YDR008C	YLR283W	Q05867	314 aa		0.87	□□□□□ -2.27
YDR008C	YDR008C	VMA6	P32366	345 aa	Known RBP	0.86	□□□□□ -2.27
YDR008C	YDR008C	NTF2	P33331	125 aa	Known RBP	0.86	□□□□□ -2.27
YDR008C	YDR008C	YET1	P35723	206 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	POP4	P38336	279 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	MIC12	P38341	106 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	SVP26	P38869	228 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	AVT2	P39981	480 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	YER085C	P40058	173 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	ICE2	P40499	491 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	YJR149W	P47177	404 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	BXI1	P48558	297 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	PRM8	P53174	237 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
YDR008C	YDR008C	YDR248C	Q03786	193 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	CSI2	Q08054	341 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	PSF1	Q12488	208 aa		0.86	□□□□□ -2.27
YDR008C	YDR008C	THP2	O13539	261 aa	Known RBP	0.85	□□□□□ -2.27
YDR008C	YDR008C	CDC28	P00546	298 aa	Known RBP	0.85	□□□□□ -2.27
YDR008C	YDR008C	RHO1	P06780	209 aa	Known RBP	0.85	□□□□□ -2.27
YDR008C	YDR008C	SPT3	P06844	337 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	YLR156W	P0CE96	114 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	YLR159W	P0CE97	114 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	YLR161W	P0CE98	114 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	YMR31	P19955	123 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	FPR1	P20081	114 aa	Known RBP	0.85	□□□□□ -2.27
YDR008C	YDR008C	MEI4	P29467	408 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	FZF1	P32805	299 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	BMH2	P34730	273 aa	Known RBP	0.85	□□□□□ -2.27
YDR008C	YDR008C	AST2	P39945	430 aa	Known RBP	0.85	□□□□□ -2.27
YDR008C	YDR008C	RMD6	P39975	231 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	YER135C	P40082	130 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	RPC17	P47076	161 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	EAF6	P47128	113 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	YNL010W	P53981	241 aa	Known RBP	0.85	□□□□□ -2.27
YDR008C	YDR008C	GAS3	Q03655	524 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	TDA8	Q6B2U8	126 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	TUS1	Q06412	1307 aa		0.85	□□□□□ -2.27
YDR008C	YDR008C	QCR8	P08525	94 aa		0.84	□□□□□ -2.27
YDR008C	YDR008C	RPL27B	P0C2H7	136 aa	Known RBP	0.84	□□□□□ -2.27
YDR008C	YDR008C	NHP6B	P11633	99 aa	Known RBP	0.84	□□□□□ -2.27
YDR008C	YDR008C	RPO26	P20435	155 aa		0.84	□□□□□ -2.27
YDR008C	YDR008C	YGL010W	P25338	174 aa		0.84	□□□□□ -2.27
YDR008C	YDR008C	SNC2	P33328	115 aa		0.84	□□□□□ -2.27
YDR008C	YDR008C	URA8	P38627	578 aa	Predicted RBP	0.84	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 45 ms