RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C SAM50P53969 484 aa4.35□□□□□ -1.71
SCM3YDL139C LAP3Q01532 483 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SCM3YDL139C RSM28Q03430 361 aa4.35□□□□□ -1.71
SCM3YDL139C PEX30Q06169 523 aa4.35□□□□□ -1.71
SCM3YDL139C SYM1Q06563 197 aa4.35□□□□□ -1.71
SCM3YDL139C GRC3Q07845 632 aa4.35□□□□□ -1.71
SCM3YDL139C GRE1Q08969 168 aa4.35□□□□□ -1.71
SCM3YDL139C SCM3Q12334 223 aa4.35□□□□□ -1.71
SCM3YDL139C BBP1Q12365 385 aa4.35□□□□□ -1.71
SCM3YDL139C ISA2Q12425 185 aa4.35□□□□□ -1.71
SCM3YDL139C ERP4Q12450 207 aa4.35□□□□□ -1.71
SCM3YDL139C SFG1Q12507 346 aa4.35□□□□□ -1.71
SCM3YDL139C YOR192C-CQ3E736 78 aa4.35□□□□□ -1.71
SCM3YDL139C YBR085C-AO43137 85 aa4.34□□□□□ -1.71
SCM3YDL139C YPT1P01123 206 aaKnown RBP4.34□□□□□ -1.71
SCM3YDL139C RPS16AP0CX51 143 aaKnown RBP4.34□□□□□ -1.71
SCM3YDL139C RPS16BP0CX52 143 aaKnown RBP4.34□□□□□ -1.71
SCM3YDL139C TIP1P27654 210 aaPredicted RBP4.34□□□□□ -1.71
SCM3YDL139C CAM1P29547 415 aaKnown RBP4.34□□□□□ -1.71
SCM3YDL139C RFC2P40348 353 aa4.34□□□□□ -1.71
SCM3YDL139C POP6P53218 158 aa4.34□□□□□ -1.71
SCM3YDL139C ATP23P53722 227 aa4.34□□□□□ -1.71
SCM3YDL139C SKO1Q02100 647 aa4.34□□□□□ -1.71
SCM3YDL139C EST3Q03096 181 aa4.34□□□□□ -1.71
SCM3YDL139C MPD1Q12404 318 aaKnown RBP4.34□□□□□ -1.71
SCM3YDL139C FOL3Q12676 427 aaPredicted RBP4.34□□□□□ -1.71
SCM3YDL139C Q0144Q9ZZW2 109 aa4.34□□□□□ -1.71
SCM3YDL139C QCR7P00128 127 aa4.33□□□□□ -1.72
SCM3YDL139C TDH2P00358 332 aaKnown RBP4.33□□□□□ -1.72
SCM3YDL139C TPI1P00942 248 aaKnown RBP4.33□□□□□ -1.72
SCM3YDL139C PHO2P07269 559 aa4.33□□□□□ -1.72
SCM3YDL139C MATALPHA1P0CY06 175 aa4.33□□□□□ -1.72
SCM3YDL139C HMLALPHA1P0CY07 175 aa4.33□□□□□ -1.72
SCM3YDL139C SEN2P16658 377 aa4.33□□□□□ -1.72
SCM3YDL139C UTR1P21373 530 aa4.33□□□□□ -1.72
SCM3YDL139C AIM17P23180 465 aaKnown RBP4.33□□□□□ -1.72
SCM3YDL139C HXT2P23585 541 aa4.33□□□□□ -1.72
SCM3YDL139C LDB16P25587 256 aa4.33□□□□□ -1.72
SCM3YDL139C SRP102P36057 244 aaPredicted RBP4.33□□□□□ -1.72
SCM3YDL139C UMP1P38293 148 aa4.33□□□□□ -1.72
SCM3YDL139C SYG1P40528 902 aa4.33□□□□□ -1.72
SCM3YDL139C OST1P41543 476 aaKnown RBP4.33□□□□□ -1.72
SCM3YDL139C ERJ5P43613 295 aaPredicted RBP4.33□□□□□ -1.72
SCM3YDL139C GWT1P47026 490 aa4.33□□□□□ -1.72
SCM3YDL139C UFD1P53044 361 aa4.33□□□□□ -1.72
SCM3YDL139C NSA1P53136 463 aaPredicted RBP4.33□□□□□ -1.72
SCM3YDL139C YPL039WQ03080 316 aa4.33□□□□□ -1.72
SCM3YDL139C YDR249CQ03787 373 aa4.33□□□□□ -1.72
SCM3YDL139C NNT1Q05874 261 aa4.33□□□□□ -1.72
SCM3YDL139C YOR385WQ08909 290 aa4.33□□□□□ -1.72
SCM3YDL139C RDI1Q12434 202 aa4.33□□□□□ -1.72
SCM3YDL139C YBR126W-AQ8TGU7 68 aa4.33□□□□□ -1.72
SCM3YDL139C RPL6BP05739 176 aaKnown RBP4.32□□□□□ -1.72
SCM3YDL139C PUT1P09368 476 aa4.32□□□□□ -1.72
SCM3YDL139C YFR010W-AP0C5N0 62 aa4.32□□□□□ -1.72
SCM3YDL139C YGL041W-AP0C5N3 154 aa4.32□□□□□ -1.72
SCM3YDL139C ARO3P14843 370 aaKnown RBP4.32□□□□□ -1.72
SCM3YDL139C SUA5P32579 426 aa4.32□□□□□ -1.72
SCM3YDL139C FLX1P40464 311 aa4.32□□□□□ -1.72
SCM3YDL139C TAD2P47058 250 aa4.32□□□□□ -1.72
SCM3YDL139C AIM25P47140 327 aa4.32□□□□□ -1.72
SCM3YDL139C TIM11P81449 96 aaPredicted RBP4.32□□□□□ -1.72
SCM3YDL139C YPL077CQ02831 240 aa4.32□□□□□ -1.72
SCM3YDL139C NIP7Q08962 181 aaKnown RBP4.32□□□□□ -1.72
SCM3YDL139C REX3Q12090 404 aa4.32□□□□□ -1.72
SCM3YDL139C YOR029WQ12243 111 aa4.32□□□□□ -1.72
SCM3YDL139C RNH203Q12338 110 aa4.32□□□□□ -1.72
SCM3YDL139C EAF3Q12432 401 aa4.32□□□□□ -1.72
SCM3YDL139C YER145C-AA0A023PYF4 145 aa4.31□□□□□ -1.72
SCM3YDL139C CHO1P08456 276 aa4.31□□□□□ -1.72
SCM3YDL139C YBL010CP32788 280 aa4.31□□□□□ -1.72
SCM3YDL139C EMP24P32803 203 aaKnown RBP4.31□□□□□ -1.72
SCM3YDL139C SNC2P33328 115 aa4.31□□□□□ -1.72
SCM3YDL139C YKL063CP35725 167 aa4.31□□□□□ -1.72
SCM3YDL139C SWD2P36104 329 aaPredicted RBP4.31□□□□□ -1.72
SCM3YDL139C POP8P38208 133 aa4.31□□□□□ -1.72
SCM3YDL139C RRF1P38771 230 aa4.31□□□□□ -1.72
SCM3YDL139C DLS1P40366 167 aa4.31□□□□□ -1.72
SCM3YDL139C AVT7P40501 490 aa4.31□□□□□ -1.72
SCM3YDL139C LOH1P47055 219 aa4.31□□□□□ -1.72
SCM3YDL139C SCW4P53334 386 aaKnown RBP4.31□□□□□ -1.72
SCM3YDL139C HHT1P61830 136 aa4.31□□□□□ -1.72
SCM3YDL139C TIM10P87108 93 aa4.31□□□□□ -1.72
SCM3YDL139C GAT3Q07928 141 aa4.31□□□□□ -1.72
SCM3YDL139C ARG80P07249 177 aa4.3□□□□□ -1.72
SCM3YDL139C NAM2P11325 894 aa4.3□□□□□ -1.72
SCM3YDL139C MSI1P13712 422 aa4.3□□□□□ -1.72
SCM3YDL139C URA6P15700 204 aa4.3□□□□□ -1.72
SCM3YDL139C OLE1P21147 510 aaKnown RBP4.3□□□□□ -1.72
SCM3YDL139C YCR016WP25617 290 aaKnown RBP4.3□□□□□ -1.72
SCM3YDL139C ITR1P30605 584 aa4.3□□□□□ -1.72
SCM3YDL139C DEG1P31115 442 aaKnown RBP4.3□□□□□ -1.72
SCM3YDL139C ACB1P31787 87 aa4.3□□□□□ -1.72
SCM3YDL139C PAN3P36102 679 aaPredicted RBP4.3□□□□□ -1.72
SCM3YDL139C MRPL3P36516 390 aa4.3□□□□□ -1.72
SCM3YDL139C CUE1P38428 203 aa4.3□□□□□ -1.72
SCM3YDL139C YER084WP40057 128 aa4.3□□□□□ -1.72
SCM3YDL139C JAC1P53193 184 aa4.3□□□□□ -1.72
SCM3YDL139C CTF19Q02732 369 aa4.3□□□□□ -1.72
SCM3YDL139C YMR130WQ04223 302 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms