RNA–Protein interactions for RNA: YDL090C

RAM1, Transcript of Beta subunit of the CAAX farnesyltransferase (FTase), yeast

Gene RAM1, Length 1,296 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAM1	YDL090C	CDC123	Q05791	360 aa		4.11	□□□□□ -1.75
RAM1	YDL090C	SMD2	Q06217	110 aa	Known RBP	4.11	□□□□□ -1.75
RAM1	YDL090C	ARR2	Q06597	130 aa		4.11	□□□□□ -1.75
RAM1	YDL090C	TIR4	Q12218	487 aa	Predicted RBP	4.11	□□□□□ -1.75
RAM1	YDL090C	TUS1	Q06412	1307 aa		4.11	□□□□□ -1.75
RAM1	YDL090C	TY1B-BR	Q12193	1756 aa		4.11	□□□□□ -1.75
RAM1	YDL090C	TY1B-GR3	Q12316	1755 aa		4.11	□□□□□ -1.75
RAM1	YDL090C	TY1B-OR	Q92393	1755 aa		4.11	□□□□□ -1.75
RAM1	YDL090C	YKR104W	P0CE69	306 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	COS2	P0CX12	379 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	COS3	P0CX13	379 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	CBF1	P17106	351 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	COX10	P21592	462 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	MAK5	P38112	773 aa	Predicted RBP	4.1	□□□□□ -1.75
RAM1	YDL090C	ECM34	P38728	170 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	YHR127W	P38833	243 aa	Known RBP	4.1	□□□□□ -1.75
RAM1	YDL090C	AVT6	P40074	448 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	PDS1	P40316	373 aa	Predicted RBP	4.1	□□□□□ -1.75
RAM1	YDL090C	COS4	P43542	379 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	APS3	P47064	194 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	CPR7	P47103	393 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	TSA2	Q04120	196 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	SPG4	Q04438	115 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	YMR114C	Q04471	368 aa	Known RBP	4.1	□□□□□ -1.75
RAM1	YDL090C	YMR226C	Q05016	267 aa	Known RBP	4.1	□□□□□ -1.75
RAM1	YDL090C	DXO1	Q06349	442 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	YPR147C	Q06522	304 aa	Known RBP	4.1	□□□□□ -1.75
RAM1	YDL090C	YRF1-2	P40105	1681 aa		4.1	□□□□□ -1.75
RAM1	YDL090C	IPP1	P00817	287 aa	Known RBP	4.09	□□□□□ -1.75
RAM1	YDL090C	KSS1	P14681	368 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	PHO80	P20052	293 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	PHO89	P38361	574 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	ASP1	P38986	381 aa	Predicted RBP	4.09	□□□□□ -1.75
RAM1	YDL090C	PRE6	P40303	254 aa	Known RBP	4.09	□□□□□ -1.75
RAM1	YDL090C	TRM9	P49957	279 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	MIC26	P50087	233 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	ALG13	P53178	202 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	COS6	P53344	381 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	HAL1	Q01766	294 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	EMP46	Q12396	444 aa		4.09	□□□□□ -1.75
RAM1	YDL090C	BUD3	P25558	1636 aa		4.09	□□□□□ -1.76
RAM1	YDL090C	CBP6	P07253	162 aa	Predicted RBP	4.08	□□□□□ -1.76
RAM1	YDL090C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RAM1	YDL090C	UTH1	P36135	365 aa		4.08	□□□□□ -1.76
RAM1	YDL090C	YBL081W	P38180	368 aa	Known RBP	4.08	□□□□□ -1.76
RAM1	YDL090C	YRB2	P40517	327 aa		4.08	□□□□□ -1.76
RAM1	YDL090C	YIL054W	P40524	105 aa		4.08	□□□□□ -1.76
RAM1	YDL090C	SYS1	P41544	203 aa		4.08	□□□□□ -1.76
RAM1	YDL090C	MGA1	P53050	456 aa		4.08	□□□□□ -1.76
RAM1	YDL090C	CAX4	P53223	239 aa		4.08	□□□□□ -1.76
RAM1	YDL090C	SWT21	P53873	357 aa	Predicted RBP	4.08	□□□□□ -1.76
RAM1	YDL090C	ATG5	Q12380	294 aa		4.08	□□□□□ -1.76
RAM1	YDL090C	MEI4	P29467	408 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	ERG2	P32352	222 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	GDH2	P33327	1092 aa	Known RBP	4.07	□□□□□ -1.76
RAM1	YDL090C	AST1	P35183	429 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	ARN2	P38724	620 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	YER034W	P40022	185 aa	Known RBP	4.07	□□□□□ -1.76
RAM1	YDL090C	ADO1	P47143	340 aa	Known RBP	4.07	□□□□□ -1.76
RAM1	YDL090C	MIG2	P53035	382 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	NIF3	P53081	288 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	YGL034C	P53186	121 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	SLX9	P53251	210 aa	Predicted RBP	4.07	□□□□□ -1.76
RAM1	YDL090C	AAH1	P53909	347 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	RPL22B	P56628	122 aa	Known RBP	4.07	□□□□□ -1.76
RAM1	YDL090C	SEI1	Q06058	285 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	MCH1	Q07376	486 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	DAS2	Q12084	232 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	YCL012C	Q8J0M4	134 aa		4.07	□□□□□ -1.76
RAM1	YDL090C	HTB1	P02293	131 aa	Known RBP	4.06	□□□□□ -1.76
RAM1	YDL090C	HTB2	P02294	131 aa		4.06	□□□□□ -1.76
RAM1	YDL090C	RPL28	P02406	149 aa	Known RBP	4.06	□□□□□ -1.76
RAM1	YDL090C	BCY1	P07278	416 aa	Known RBP	4.06	□□□□□ -1.76
RAM1	YDL090C	VPS51	P36116	164 aa		4.06	□□□□□ -1.76
RAM1	YDL090C	VMA22	P38784	181 aa		4.06	□□□□□ -1.76
RAM1	YDL090C	MTW1	P39731	289 aa		4.06	□□□□□ -1.76
RAM1	YDL090C	AST2	P39945	430 aa	Known RBP	4.06	□□□□□ -1.76
RAM1	YDL090C	UFE1	P41834	346 aa		4.06	□□□□□ -1.76
RAM1	YDL090C	YPL039W	Q03080	316 aa		4.06	□□□□□ -1.76
RAM1	YDL090C	BRX1	Q08235	291 aa	Known RBP	4.06	□□□□□ -1.76
RAM1	YDL090C	RRP40	Q08285	240 aa	Known RBP	4.06	□□□□□ -1.76
RAM1	YDL090C	DCN1	Q12395	269 aa		4.06	□□□□□ -1.76
RAM1	YDL090C	CKA2	P19454	339 aa		4.05	□□□□□ -1.76
RAM1	YDL090C	RFA3	P26755	122 aa	Known RBP	4.05	□□□□□ -1.76
RAM1	YDL090C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RAM1	YDL090C	DRE2	P36152	348 aa		4.05	□□□□□ -1.76
RAM1	YDL090C	YJR149W	P47177	404 aa		4.05	□□□□□ -1.76
RAM1	YDL090C	UFD1	P53044	361 aa		4.05	□□□□□ -1.76
RAM1	YDL090C	MRH4	P53166	561 aa		4.05	□□□□□ -1.76
RAM1	YDL090C	NOP19	P53317	196 aa	Predicted RBP	4.05	□□□□□ -1.76
RAM1	YDL090C	YPL229W	Q99395	206 aa		4.05	□□□□□ -1.76
RAM1	YDL090C	CSG2	P35206	410 aa		4.04	□□□□□ -1.76
RAM1	YDL090C	MRPL39	P36533	70 aa		4.04	□□□□□ -1.76
RAM1	YDL090C	ETR1	P38071	380 aa		4.04	□□□□□ -1.76
RAM1	YDL090C	TRM5	P38793	499 aa		4.04	□□□□□ -1.76
RAM1	YDL090C	FRT2	P39734	528 aa		4.04	□□□□□ -1.76
RAM1	YDL090C	SMX2	P40204	77 aa	Known RBP	4.04	□□□□□ -1.76
RAM1	YDL090C	RPE1	P46969	238 aa		4.04	□□□□□ -1.76
RAM1	YDL090C	TOS8	P53147	276 aa		4.04	□□□□□ -1.76
RAM1	YDL090C	YNL046W	P53956	172 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms