RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W ARR2Q06597 130 aa2.01□□□□□ -2.09
UBC9YDL064W HEM25Q07534 307 aa2.01□□□□□ -2.09
UBC9YDL064W YKL183C-AQ3E765 70 aa2.01□□□□□ -2.09
UBC9YDL064W CDC28P00546 298 aaKnown RBP2□□□□□ -2.09
UBC9YDL064W SCL1P21243 252 aaKnown RBP2□□□□□ -2.09
UBC9YDL064W DOG1P38774 246 aa2□□□□□ -2.09
UBC9YDL064W PRE6P40303 254 aaKnown RBP2□□□□□ -2.09
UBC9YDL064W MIC26P50087 233 aa2□□□□□ -2.09
UBC9YDL064W GIS3Q12418 502 aa2□□□□□ -2.09
UBC9YDL064W RPL9AP05738 191 aaKnown RBP1.99□□□□□ -2.09
UBC9YDL064W YPR170W-BP0C5R9 85 aa1.99□□□□□ -2.09
UBC9YDL064W DBF2P22204 572 aa1.99□□□□□ -2.09
UBC9YDL064W PBN1P25580 416 aa1.99□□□□□ -2.09
UBC9YDL064W CBT1P36038 271 aaPredicted RBP1.99□□□□□ -2.09
UBC9YDL064W ERG28P40030 148 aa1.99□□□□□ -2.09
UBC9YDL064W COX15P40086 486 aa1.99□□□□□ -2.09
UBC9YDL064W YIL001WP40560 513 aa1.99□□□□□ -2.09
UBC9YDL064W MSS2P40990 351 aa1.99□□□□□ -2.09
UBC9YDL064W CIS3P47001 227 aa1.99□□□□□ -2.09
UBC9YDL064W RPL9BP51401 191 aaKnown RBP1.99□□□□□ -2.09
UBC9YDL064W FYV6P53913 173 aa1.99□□□□□ -2.09
UBC9YDL064W PRM15Q03262 622 aa1.99□□□□□ -2.09
UBC9YDL064W TRM12Q04235 462 aa1.99□□□□□ -2.09
UBC9YDL064W SSQ1Q05931 657 aaPredicted RBP1.99□□□□□ -2.09
UBC9YDL064W NEJ1Q06148 342 aa1.99□□□□□ -2.09
UBC9YDL064W SEY1Q99287 776 aa1.99□□□□□ -2.09
UBC9YDL064W DRS2P39524 1355 aa1.98□□□□□ -2.09
UBC9YDL064W MSW1P04803 379 aa1.98□□□□□ -2.09
UBC9YDL064W NHP6BP11633 99 aaKnown RBP1.98□□□□□ -2.09
UBC9YDL064W PEX4P29340 183 aa1.98□□□□□ -2.09
UBC9YDL064W OAC1P32332 324 aa1.98□□□□□ -2.09
UBC9YDL064W IRC22P40006 225 aa1.98□□□□□ -2.09
UBC9YDL064W YNL194CP40169 301 aa1.98□□□□□ -2.09
UBC9YDL064W YGR219WP53307 113 aa1.98□□□□□ -2.09
UBC9YDL064W CDC8P00572 216 aa1.97□□□□□ -2.09
UBC9YDL064W RPL28P02406 149 aaKnown RBP1.97□□□□□ -2.09
UBC9YDL064W YBR121C-AP0C5L4 52 aa1.97□□□□□ -2.09
UBC9YDL064W MDH3P32419 343 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
UBC9YDL064W TCD1P38756 429 aa1.97□□□□□ -2.09
UBC9YDL064W NUP57P48837 541 aa1.97□□□□□ -2.09
UBC9YDL064W ABF2Q02486 183 aa1.97□□□□□ -2.09
UBC9YDL064W SPG3Q04398 127 aaPredicted RBP1.97□□□□□ -2.09
UBC9YDL064W YDR157WA0A023PZE8 133 aa1.96□□□□□ -2.1
UBC9YDL064W CDC33P07260 213 aaKnown RBP1.96□□□□□ -2.1
UBC9YDL064W SSO1P32867 290 aa1.96□□□□□ -2.1
UBC9YDL064W DOG2P38773 246 aa1.96□□□□□ -2.1
UBC9YDL064W PRM10P42946 383 aa1.96□□□□□ -2.1
UBC9YDL064W RAD17P48581 401 aa1.96□□□□□ -2.1
UBC9YDL064W MGA1P53050 456 aa1.96□□□□□ -2.1
UBC9YDL064W BRR6P53062 197 aa1.96□□□□□ -2.1
UBC9YDL064W YNL010WP53981 241 aaKnown RBP1.96□□□□□ -2.1
UBC9YDL064W DAD3P69850 94 aa1.96□□□□□ -2.1
UBC9YDL064W CYT2Q00873 224 aa1.96□□□□□ -2.1
UBC9YDL064W LPP1Q04396 274 aa1.96□□□□□ -2.1
UBC9YDL064W DCN1Q12395 269 aa1.96□□□□□ -2.1
UBC9YDL064W PSF1Q12488 208 aa1.96□□□□□ -2.1
UBC9YDL064W FBA1P14540 359 aaKnown RBP1.95□□□□□ -2.1
UBC9YDL064W COQ1P18900 473 aa1.95□□□□□ -2.1
UBC9YDL064W PHO88P38264 188 aaPredicted RBP1.95□□□□□ -2.1
UBC9YDL064W GCN20P43535 752 aaKnown RBP1.95□□□□□ -2.1
UBC9YDL064W BXI1P48558 297 aa1.95□□□□□ -2.1
UBC9YDL064W YNR062CP53748 327 aa1.95□□□□□ -2.1
UBC9YDL064W YMD8Q03697 442 aa1.95□□□□□ -2.1
UBC9YDL064W RUD3Q12234 484 aaKnown RBP1.95□□□□□ -2.1
UBC9YDL064W PRP18P33411 251 aaPredicted RBP1.94□□□□□ -2.1
UBC9YDL064W ERV15P38312 142 aa1.94□□□□□ -2.1
UBC9YDL064W YHR022CP38763 256 aa1.94□□□□□ -2.1
UBC9YDL064W LSM4P40070 187 aaKnown RBP1.94□□□□□ -2.1
UBC9YDL064W AYR1P40471 297 aa1.94□□□□□ -2.1
UBC9YDL064W ADO1P47143 340 aaKnown RBP1.94□□□□□ -2.1
UBC9YDL064W CWC23P52868 283 aaPredicted RBP1.94□□□□□ -2.1
UBC9YDL064W TDA8Q6B2U8 126 aa1.94□□□□□ -2.1
UBC9YDL064W YLR156WP0CE96 114 aa1.93□□□□□ -2.1
UBC9YDL064W YLR159WP0CE97 114 aa1.93□□□□□ -2.1
UBC9YDL064W YLR161WP0CE98 114 aa1.93□□□□□ -2.1
UBC9YDL064W STE18P18852 110 aa1.93□□□□□ -2.1
UBC9YDL064W DID2P69771 204 aa1.93□□□□□ -2.1
UBC9YDL064W GAS3Q03655 524 aa1.93□□□□□ -2.1
UBC9YDL064W YDR248CQ03786 193 aa1.93□□□□□ -2.1
UBC9YDL064W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
UBC9YDL064W REP2P03872 296 aa1.92□□□□□ -2.1
UBC9YDL064W PRX1P34227 261 aaKnown RBP1.92□□□□□ -2.1
UBC9YDL064W YKE4P40544 346 aa1.92□□□□□ -2.1
UBC9YDL064W BAT2P47176 376 aaKnown RBP1.92□□□□□ -2.1
UBC9YDL064W PET191Q02772 108 aa1.92□□□□□ -2.1
UBC9YDL064W JLP1Q12358 412 aa1.92□□□□□ -2.1
UBC9YDL064W LSO2Q3E772 92 aaKnown RBP1.92□□□□□ -2.1
UBC9YDL064W CDC36P06100 191 aaPredicted RBP1.91□□□□□ -2.1
UBC9YDL064W DDI2P0CH63 225 aa1.91□□□□□ -2.1
UBC9YDL064W DDI3P0CH64 225 aa1.91□□□□□ -2.1
UBC9YDL064W ATG22P25568 528 aa1.91□□□□□ -2.1
UBC9YDL064W POP4P38336 279 aa1.91□□□□□ -2.1
UBC9YDL064W SIP3P38717 1229 aa1.91□□□□□ -2.1
UBC9YDL064W BMT5P40493 336 aa1.91□□□□□ -2.1
UBC9YDL064W FAR7P43592 221 aa1.91□□□□□ -2.1
UBC9YDL064W PGA2P53903 129 aa1.91□□□□□ -2.1
UBC9YDL064W BOL1Q3E793 110 aa1.91□□□□□ -2.1
UBC9YDL064W PET9P18239 318 aaKnown RBP1.9□□□□□ -2.11
UBC9YDL064W APS1P35181 156 aa1.9□□□□□ -2.11
UBC9YDL064W TAF14P35189 244 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 77.9 ms