RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W THP2O13539 261 aaKnown RBP0.9□□□□□ -2.26
CDC39YCR093W RPS3P05750 240 aaKnown RBP0.9□□□□□ -2.26
CDC39YCR093W ZWF1P11412 505 aaKnown RBP0.9□□□□□ -2.26
CDC39YCR093W PMT2P31382 759 aa0.9□□□□□ -2.26
CDC39YCR093W ALD5P40047 520 aaKnown RBP0.9□□□□□ -2.26
CDC39YCR093W AVT7P40501 490 aa0.9□□□□□ -2.26
CDC39YCR093W YGL088WP53151 121 aa0.9□□□□□ -2.26
CDC39YCR093W YNR062CP53748 327 aa0.9□□□□□ -2.26
CDC39YCR093W ABZ2Q03266 374 aa0.9□□□□□ -2.26
CDC39YCR093W ECM18Q04623 453 aa0.9□□□□□ -2.26
CDC39YCR093W YPR014CQ6B0W2 109 aa0.9□□□□□ -2.26
CDC39YCR093W UBR2Q07963 1872 aa0.9□□□□□ -2.27
CDC39YCR093W SEC14P24280 304 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W HOM6P31116 359 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W ARO4P32449 370 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W PRX1P34227 261 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W COA1P40452 197 aa0.9□□□□□ -2.27
CDC39YCR093W DFM1Q12743 341 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W TRM7P38238 310 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W FES1P38260 290 aa0.9□□□□□ -2.27
CDC39YCR093W NAS2P40555 220 aa0.9□□□□□ -2.27
CDC39YCR093W YGL034CP53186 121 aa0.9□□□□□ -2.27
CDC39YCR093W RTC4P53850 401 aa0.9□□□□□ -2.27
CDC39YCR093W DAD3P69850 94 aa0.9□□□□□ -2.27
CDC39YCR093W OST6Q03723 332 aa0.9□□□□□ -2.27
CDC39YCR093W POF1P25576 258 aa0.9□□□□□ -2.27
CDC39YCR093W VAB2P40003 282 aa0.9□□□□□ -2.27
CDC39YCR093W TIS11P47977 285 aa0.9□□□□□ -2.27
CDC39YCR093W MYO5Q04439 1219 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W MSH5Q12175 901 aa0.9□□□□□ -2.27
CDC39YCR093W TIR4Q12218 487 aaPredicted RBP0.9□□□□□ -2.27
CDC39YCR093W YPS3Q12303 508 aa0.9□□□□□ -2.27
CDC39YCR093W RPS14AP06367 137 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W SPS100P13130 326 aa0.9□□□□□ -2.27
CDC39YCR093W RPS14BP39516 138 aaKnown RBP0.9□□□□□ -2.27
CDC39YCR093W YER188WP40103 239 aa0.9□□□□□ -2.27
CDC39YCR093W YJR056CP47115 236 aa0.9□□□□□ -2.27
CDC39YCR093W GIS2P53849 153 aaKnown RBP RIP-Chip data0.9□□□□□ -2.27not detected
CDC39YCR093W RNH1Q04740 348 aa0.9□□□□□ -2.27
CDC39YCR093W TAZ1Q06510 381 aa0.9□□□□□ -2.27
CDC39YCR093W CUP1-1P0CX80 61 aa0.89□□□□□ -2.27
CDC39YCR093W CUP1-2P0CX81 61 aa0.89□□□□□ -2.27
CDC39YCR093W POL30P15873 258 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W CCA1P21269 546 aa0.89□□□□□ -2.27
CDC39YCR093W UBC6P33296 250 aaPredicted RBP0.89□□□□□ -2.27
CDC39YCR093W MRPL28P36527 147 aa0.89□□□□□ -2.27
CDC39YCR093W YIL001WP40560 513 aa0.89□□□□□ -2.27
CDC39YCR093W CIS3P47001 227 aa0.89□□□□□ -2.27
CDC39YCR093W MIG2P53035 382 aa0.89□□□□□ -2.27
CDC39YCR093W GET4Q12125 312 aa0.89□□□□□ -2.27
CDC39YCR093W USB1Q12208 290 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W ERG24P32462 438 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W FRM2P37261 193 aa0.89□□□□□ -2.27
CDC39YCR093W RIB1P38066 345 aa0.89□□□□□ -2.27
CDC39YCR093W HMT1P38074 348 aa0.89□□□□□ -2.27
CDC39YCR093W RFS1P38234 210 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W YAR1P46683 200 aa0.89□□□□□ -2.27
CDC39YCR093W YNL134CP53912 376 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W EMC6Q12431 108 aa0.89□□□□□ -2.27
CDC39YCR093W COX2P00410 251 aa0.89□□□□□ -2.27
CDC39YCR093W HTB1P02293 131 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W HTB2P02294 131 aa0.89□□□□□ -2.27
CDC39YCR093W CDC10P25342 322 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W SMP1P38128 452 aa0.89□□□□□ -2.27
CDC39YCR093W POP4P38336 279 aa0.89□□□□□ -2.27
CDC39YCR093W AVT2P39981 480 aa0.89□□□□□ -2.27
CDC39YCR093W YRB2P40517 327 aa0.89□□□□□ -2.27
CDC39YCR093W PFS2P42841 465 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W GRH1Q04410 372 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W RIO1Q12196 484 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W MCT1Q12283 360 aa0.89□□□□□ -2.27
CDC39YCR093W COG3P40094 801 aa0.89□□□□□ -2.27
CDC39YCR093W FAR7P43592 221 aa0.89□□□□□ -2.27
CDC39YCR093W UFD1P53044 361 aa0.89□□□□□ -2.27
CDC39YCR093W TPN1P53099 579 aa0.89□□□□□ -2.27
CDC39YCR093W LSB1P53281 241 aa0.89□□□□□ -2.27
CDC39YCR093W COS6P53344 381 aa0.89□□□□□ -2.27
CDC39YCR093W FMP41P53889 259 aaKnown RBP0.89□□□□□ -2.27
CDC39YCR093W BSC6Q08280 497 aa0.89□□□□□ -2.27
CDC39YCR093W YDL180WQ12301 547 aa0.89□□□□□ -2.27
CDC39YCR093W QCR7P00128 127 aa0.88□□□□□ -2.27
CDC39YCR093W URA5P13298 226 aaKnown RBP0.88□□□□□ -2.27
CDC39YCR093W URA6P15700 204 aa0.88□□□□□ -2.27
CDC39YCR093W YMR31P19955 123 aa0.88□□□□□ -2.27
CDC39YCR093W BIG1P38813 335 aa0.88□□□□□ -2.27
CDC39YCR093W FMP32P43557 207 aa0.88□□□□□ -2.27
CDC39YCR093W OTU1P43558 301 aa0.88□□□□□ -2.27
CDC39YCR093W BXI1P48558 297 aa0.88□□□□□ -2.27
CDC39YCR093W DID2P69771 204 aa0.88□□□□□ -2.27
CDC39YCR093W SUE1Q06524 206 aa0.88□□□□□ -2.27
CDC39YCR093W HRD1Q08109 551 aa0.88□□□□□ -2.27
CDC39YCR093W GPM2Q12008 311 aa0.88□□□□□ -2.27
CDC39YCR093W ATG31Q12421 196 aa0.88□□□□□ -2.27
CDC39YCR093W YBR121C-AP0C5L4 52 aa0.88□□□□□ -2.27
CDC39YCR093W MAG1P22134 296 aaKnown RBP0.88□□□□□ -2.27
CDC39YCR093W YCR090CP25654 182 aaKnown RBP0.88□□□□□ -2.27
CDC39YCR093W YBR209WP38311 105 aa0.88□□□□□ -2.27
CDC39YCR093W BBP1Q12365 385 aa0.88□□□□□ -2.27
CDC39YCR093W ATG5Q12380 294 aa0.88□□□□□ -2.27
CDC39YCR093W MSW1P04803 379 aa0.88□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms