RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 BNA7Q04066 261 aa-1.75□□□□□ -2.69
snR38snR38 TSR2Q06672 205 aaKnown RBP-1.75□□□□□ -2.69
snR38snR38 PDR18P53756 1333 aa-1.75□□□□□ -2.69
snR38snR38 FAS1P07149 2051 aaKnown RBP-1.76□□□□□ -2.69
snR38snR38 SIR2P06700 562 aa-1.76□□□□□ -2.69
snR38snR38 SEC11P15367 167 aa-1.76□□□□□ -2.69
snR38snR38 TRX2P22803 104 aaKnown RBP-1.76□□□□□ -2.69
snR38snR38 ERG24P32462 438 aaKnown RBP-1.76□□□□□ -2.69
snR38snR38 SPT4P32914 102 aaPredicted RBP-1.76□□□□□ -2.69
snR38snR38 HPA3P39979 161 aa-1.76□□□□□ -2.69
snR38snR38 TPM2P40414 161 aa-1.76□□□□□ -2.69
snR38snR38 YJL055WP47044 245 aa-1.76□□□□□ -2.69
snR38snR38 YGR168CP53293 376 aa-1.76□□□□□ -2.69
snR38snR38 CUE4Q04201 117 aaPredicted RBP-1.76□□□□□ -2.69
snR38snR38 FIT1Q04433 528 aa-1.76□□□□□ -2.69
snR38snR38 MRPS28P21771 286 aa-1.77□□□□□ -2.69
snR38snR38 CLG1P35190 452 aa-1.77□□□□□ -2.69
snR38snR38 MSA2P36157 363 aa-1.77□□□□□ -2.69
snR38snR38 YIA6P40556 373 aa-1.77□□□□□ -2.69
snR38snR38 SOL1P50278 321 aa-1.77□□□□□ -2.69
snR38snR38 DOC1P53068 250 aa-1.77□□□□□ -2.69
snR38snR38 YNR077CP53758 84 aa-1.77□□□□□ -2.69
snR38snR38 RMT2Q03305 412 aa-1.77□□□□□ -2.69
snR38snR38 YLR287CQ05881 355 aa-1.77□□□□□ -2.69
snR38snR38 YPR013CQ12145 317 aa-1.77□□□□□ -2.69
snR38snR38 MED1Q12321 566 aa-1.77□□□□□ -2.69
snR38snR38 GSC2P40989 1895 aa-1.77□□□□□ -2.69
snR38snR38 CDC8P00572 216 aa-1.78□□□□□ -2.69
snR38snR38 ATP6P00854 259 aa-1.78□□□□□ -2.69
snR38snR38 YKL063CP35725 167 aa-1.78□□□□□ -2.69
snR38snR38 HTD2P38790 280 aaKnown RBP-1.78□□□□□ -2.69
snR38snR38 YAR068WP39564 161 aa-1.78□□□□□ -2.69
snR38snR38 LSM5P40089 93 aaKnown RBP-1.78□□□□□ -2.69
snR38snR38 UPS3Q04006 179 aa-1.78□□□□□ -2.69
snR38snR38 YLR179CQ06252 201 aaKnown RBP-1.78□□□□□ -2.69
snR38snR38 YPL257WQ08974 193 aa-1.78□□□□□ -2.69
snR38snR38 RAD28Q12021 506 aa-1.78□□□□□ -2.69
snR38snR38 RPL1AP0CX43 217 aaKnown RBP-1.79□□□□□ -2.7
snR38snR38 RPL1BP0CX44 217 aaKnown RBP-1.79□□□□□ -2.7
snR38snR38 ECM4P36156 370 aa-1.79□□□□□ -2.7
snR38snR38 GDT1P38301 280 aaPredicted RBP-1.79□□□□□ -2.7
snR38snR38 RSM25P40496 264 aa-1.79□□□□□ -2.7
snR38snR38 BUD27P43573 796 aaKnown RBP RIP-Chip data-1.79□□□□□ -2.7not detected
snR38snR38 YJR056CP47115 236 aa-1.79□□□□□ -2.7
snR38snR38 YGL159WP53110 370 aa-1.79□□□□□ -2.7
snR38snR38 PET191Q02772 108 aa-1.79□□□□□ -2.7
snR38snR38 SEC10Q06245 871 aa-1.79□□□□□ -2.7
snR38snR38 NAT3Q06504 195 aa-1.79□□□□□ -2.7
snR38snR38 GPM3Q12326 303 aa-1.79□□□□□ -2.7
snR38snR38 URA2P07259 2214 aaKnown RBP-1.8□□□□□ -2.7
snR38snR38 TUS1Q06412 1307 aa-1.8□□□□□ -2.7
snR38snR38 YLR236CA0A023PZG4 107 aa-1.8□□□□□ -2.7
snR38snR38 MSF1P08425 469 aa-1.8□□□□□ -2.7
snR38snR38 ICL1P28240 557 aaPredicted RBP-1.8□□□□□ -2.7
snR38snR38 SNC2P33328 115 aa-1.8□□□□□ -2.7
snR38snR38 RPB7P34087 171 aa-1.8□□□□□ -2.7
snR38snR38 INA22P40576 216 aa-1.8□□□□□ -2.7
snR38snR38 IBA57P47158 497 aa-1.8□□□□□ -2.7
snR38snR38 YNL146WP53906 100 aa-1.8□□□□□ -2.7
snR38snR38 YDC1Q02896 317 aa-1.8□□□□□ -2.7
snR38snR38 MET31Q03081 177 aa-1.8□□□□□ -2.7
snR38snR38 YDR124WQ04608 324 aa-1.8□□□□□ -2.7
snR38snR38 DBP9Q06218 594 aaKnown RBP-1.8□□□□□ -2.7
snR38snR38 LOA1Q06508 300 aa-1.8□□□□□ -2.7
snR38snR38 PBP4Q07362 185 aaKnown RBP-1.8□□□□□ -2.7
snR38snR38 PER33Q12144 273 aa-1.8□□□□□ -2.7
snR38snR38 YRA1Q12159 226 aaKnown RBP-1.8□□□□□ -2.7
snR38snR38 YOS9Q99220 542 aa-1.8□□□□□ -2.7
snR38snR38 ATG40Q99325 256 aa-1.8□□□□□ -2.7
snR38snR38 RPL6BP05739 176 aaKnown RBP-1.81□□□□□ -2.7
snR38snR38 MSN4P33749 630 aa-1.81□□□□□ -2.7
snR38snR38 RPC37P36121 282 aa-1.81□□□□□ -2.7
snR38snR38 MRX3P38172 270 aa-1.81□□□□□ -2.7
snR38snR38 HEK2P38199 381 aaKnown RBP RIP-Chip data-1.81□□□□□ -2.7not detected
snR38snR38 UMP1P38293 148 aa-1.81□□□□□ -2.7
snR38snR38 DOG2P38773 246 aa-1.81□□□□□ -2.7
snR38snR38 ALP1P38971 573 aa-1.81□□□□□ -2.7
snR38snR38 PRE6P40303 254 aaKnown RBP-1.81□□□□□ -2.7
snR38snR38 MLC1P53141 149 aa-1.81□□□□□ -2.7
snR38snR38 RPL6AQ02326 176 aaKnown RBP-1.81□□□□□ -2.7
snR38snR38 YPL077CQ02831 240 aa-1.81□□□□□ -2.7
snR38snR38 SPG3Q04398 127 aaPredicted RBP-1.81□□□□□ -2.7
snR38snR38 KEI1Q06346 221 aa-1.81□□□□□ -2.7
snR38snR38 YPR174CQ06616 221 aaPredicted RBP-1.81□□□□□ -2.7
snR38snR38 APC9Q12107 265 aa-1.81□□□□□ -2.7
snR38snR38 SPO24Q3E752 67 aa-1.81□□□□□ -2.7
snR38snR38 ADE1P27616 306 aa-1.82□□□□□ -2.7
snR38snR38 YPT52P36018 234 aaKnown RBP-1.82□□□□□ -2.7
snR38snR38 SHE2P36068 246 aaKnown RBP RIP-Chip data-1.82□□□□□ -2.7not detected
snR38snR38 TDA11P38854 504 aa-1.82□□□□□ -2.7
snR38snR38 SER2P42941 309 aa-1.82□□□□□ -2.7
snR38snR38 UTP6Q02354 440 aaKnown RBP-1.82□□□□□ -2.7
snR38snR38 TRM12Q04235 462 aa-1.82□□□□□ -2.7
snR38snR38 YMR111CQ04461 462 aaPredicted RBP-1.82□□□□□ -2.7
snR38snR38 YOR072WQ08486 104 aa-1.82□□□□□ -2.7
snR38snR38 NIP7Q08962 181 aaKnown RBP-1.82□□□□□ -2.7
snR38snR38 YDR262WQ12331 272 aa-1.82□□□□□ -2.7
snR38snR38 LAA1P39526 2014 aa-1.83□□□□□ -2.7
snR38snR38 FUR1P18562 216 aaKnown RBP-1.83□□□□□ -2.7
snR38snR38 RDS1P25611 832 aa-1.83□□□□□ -2.7
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms