RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C IKS1P47042 667 aa3.11□□□□□ -1.91
SHH3YMR118C NIT3P49954 291 aa3.11□□□□□ -1.91
SHH3YMR118C MGA1P53050 456 aa3.11□□□□□ -1.91
SHH3YMR118C YIP4P53093 235 aa3.11□□□□□ -1.91
SHH3YMR118C YGL114WP53134 725 aa3.11□□□□□ -1.91
SHH3YMR118C HCH1P53834 153 aa3.11□□□□□ -1.91
SHH3YMR118C PDR16P53860 351 aaKnown RBP3.11□□□□□ -1.91
SHH3YMR118C INP1Q03694 420 aa3.11□□□□□ -1.91
SHH3YMR118C YDR248CQ03786 193 aa3.11□□□□□ -1.91
SHH3YMR118C MTQ2Q03920 221 aaPredicted RBP3.11□□□□□ -1.91
SHH3YMR118C YDR415CQ04033 374 aaPredicted RBP3.11□□□□□ -1.91
SHH3YMR118C RTT103Q05543 409 aa3.11□□□□□ -1.91
SHH3YMR118C TMA10Q06177 86 aa3.11□□□□□ -1.91
SHH3YMR118C YLR456WQ06199 204 aa3.11□□□□□ -1.91
SHH3YMR118C HEM25Q07534 307 aa3.11□□□□□ -1.91
SHH3YMR118C ATG10Q07879 167 aa3.11□□□□□ -1.91
SHH3YMR118C VAM3Q12241 283 aa3.11□□□□□ -1.91
SHH3YMR118C AIM45Q12480 344 aaKnown RBP3.11□□□□□ -1.91
SHH3YMR118C YLR111WQ12528 110 aa3.11□□□□□ -1.91
SHH3YMR118C RPL13AQ12690 199 aaPredicted RBP3.11□□□□□ -1.91
SHH3YMR118C COA6Q3E846 104 aa3.11□□□□□ -1.91
SHH3YMR118C QCR2P07257 368 aa3.1□□□□□ -1.91
SHH3YMR118C FUN14P18411 198 aa3.1□□□□□ -1.91
SHH3YMR118C SNF5P18480 905 aa3.1□□□□□ -1.91
SHH3YMR118C NUP1P20676 1076 aa3.1□□□□□ -1.91
SHH3YMR118C TRS65P32893 560 aa3.1□□□□□ -1.91
SHH3YMR118C AFR1P33304 620 aa3.1□□□□□ -1.91
SHH3YMR118C MIA40P36046 403 aa3.1□□□□□ -1.91
SHH3YMR118C AUR1P36107 401 aaPredicted RBP3.1□□□□□ -1.91
SHH3YMR118C MRPS9P38120 278 aa3.1□□□□□ -1.91
SHH3YMR118C SSH1P38353 490 aaKnown RBP3.1□□□□□ -1.91
SHH3YMR118C YBR292CP38357 123 aa3.1□□□□□ -1.91
SHH3YMR118C RRP3P38712 501 aaKnown RBP3.1□□□□□ -1.91
SHH3YMR118C YEA6P39953 335 aa3.1□□□□□ -1.91
SHH3YMR118C YEA4P40004 342 aa3.1□□□□□ -1.91
SHH3YMR118C PIG2P40187 538 aa3.1□□□□□ -1.91
SHH3YMR118C BNS1P50084 137 aa3.1□□□□□ -1.91
SHH3YMR118C RMD9P53140 646 aaKnown RBP3.1□□□□□ -1.91
SHH3YMR118C YGR250CP53316 781 aaKnown RBP3.1□□□□□ -1.91
SHH3YMR118C YLR152CP54072 576 aa3.1□□□□□ -1.91
SHH3YMR118C CYT2Q00873 224 aa3.1□□□□□ -1.91
SHH3YMR118C EGD1Q02642 157 aaKnown RBP3.1□□□□□ -1.91
SHH3YMR118C ADD37Q03233 198 aa3.1□□□□□ -1.91
SHH3YMR118C GMC1Q04399 608 aa3.1□□□□□ -1.91
SHH3YMR118C AVO2Q04749 426 aa3.1□□□□□ -1.91
SHH3YMR118C BNA5Q05979 453 aa3.1□□□□□ -1.91
SHH3YMR118C MRPL51Q06090 140 aaPredicted RBP3.1□□□□□ -1.91
SHH3YMR118C HRT1Q08273 121 aa3.1□□□□□ -1.91
SHH3YMR118C SRO7Q12038 1033 aa3.1□□□□□ -1.91
SHH3YMR118C ATX2Q12067 313 aa3.1□□□□□ -1.91
SHH3YMR118C YCT1Q12235 531 aa3.1□□□□□ -1.91
SHH3YMR118C MCT1Q12283 360 aa3.1□□□□□ -1.91
SHH3YMR118C YLR118CQ12354 227 aa3.1□□□□□ -1.91
SHH3YMR118C ERG27Q12452 347 aaKnown RBP3.1□□□□□ -1.91
SHH3YMR118C TMA17Q12513 150 aa3.1□□□□□ -1.91
SHH3YMR118C YIL002W-AQ3E7Z5 69 aa3.1□□□□□ -1.91
SHH3YMR118C INH1P01097 85 aa3.09□□□□□ -1.91
SHH3YMR118C GDH1P07262 454 aaKnown RBP3.09□□□□□ -1.91
SHH3YMR118C SGA1P08019 549 aa3.09□□□□□ -1.91
SHH3YMR118C OLE1P21147 510 aaKnown RBP3.09□□□□□ -1.91
SHH3YMR118C SEC62P21825 274 aa3.09□□□□□ -1.91
SHH3YMR118C CPR2P23285 205 aa3.09□□□□□ -1.91
SHH3YMR118C YCR101CP25607 182 aa3.09□□□□□ -1.91
SHH3YMR118C MTC7P32633 139 aa3.09□□□□□ -1.91
SHH3YMR118C PTR2P32901 601 aa3.09□□□□□ -1.91
SHH3YMR118C PAD1P33751 242 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
SHH3YMR118C GPX1P36014 167 aa3.09□□□□□ -1.91
SHH3YMR118C MRPL15P36523 253 aa3.09□□□□□ -1.91
SHH3YMR118C FAT1P38225 669 aa3.09□□□□□ -1.91
SHH3YMR118C ANS1P38832 159 aa3.09□□□□□ -1.91
SHH3YMR118C CHS7P38843 316 aa3.09□□□□□ -1.91
SHH3YMR118C NOP16P40007 231 aaKnown RBP3.09□□□□□ -1.91
SHH3YMR118C YER158CP40095 573 aa3.09□□□□□ -1.91
SHH3YMR118C SLZ1P40167 298 aa3.09□□□□□ -1.91
SHH3YMR118C YIL067CP40514 678 aa3.09□□□□□ -1.91
SHH3YMR118C FAF1P40546 346 aaPredicted RBP3.09□□□□□ -1.91
SHH3YMR118C NAS2P40555 220 aa3.09□□□□□ -1.91
SHH3YMR118C BUD8P41698 603 aa3.09□□□□□ -1.91
SHH3YMR118C MOB2P43563 287 aa3.09□□□□□ -1.91
SHH3YMR118C ASK10P48361 1146 aa3.09□□□□□ -1.91
SHH3YMR118C YGL262WP53054 175 aa3.09□□□□□ -1.91
SHH3YMR118C SLX9P53251 210 aaPredicted RBP3.09□□□□□ -1.91
SHH3YMR118C VPS62P53285 467 aa3.09□□□□□ -1.91
SHH3YMR118C PBP1P53297 722 aaKnown RBP3.09□□□□□ -1.91
SHH3YMR118C YAP1802P53309 568 aa3.09□□□□□ -1.91
SHH3YMR118C YNR066CP53752 436 aa3.09□□□□□ -1.91
SHH3YMR118C TEX1P53851 422 aaKnown RBP3.09□□□□□ -1.91
SHH3YMR118C ALG9P53868 555 aaKnown RBP3.09□□□□□ -1.91
SHH3YMR118C SKO1Q02100 647 aa3.09□□□□□ -1.91
SHH3YMR118C YDC1Q02896 317 aa3.09□□□□□ -1.91
SHH3YMR118C NRG1Q03125 231 aa3.09□□□□□ -1.91
SHH3YMR118C YML096WQ04489 525 aa3.09□□□□□ -1.91
SHH3YMR118C ASM4Q05166 528 aa3.09□□□□□ -1.91
SHH3YMR118C CTR3Q06686 241 aa3.09□□□□□ -1.91
SHH3YMR118C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
SHH3YMR118C YPL272CQ08984 517 aa3.09□□□□□ -1.91
SHH3YMR118C PFA4Q12006 378 aa3.09□□□□□ -1.91
SHH3YMR118C SRL2Q12020 392 aa3.09□□□□□ -1.91
SHH3YMR118C YOR015WQ12169 119 aa3.09□□□□□ -1.91
SHH3YMR118C FYV7Q12247 151 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 129.3 ms