RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C RPA43P46669 326 aa3.22□□□□□ -1.89
PDX1YGR193C ATG27P46989 271 aa3.22□□□□□ -1.89
PDX1YGR193C YJL043WP47053 257 aa3.22□□□□□ -1.89
PDX1YGR193C CPR7P47103 393 aa3.22□□□□□ -1.89
PDX1YGR193C YGL082WP53155 381 aa3.22□□□□□ -1.89
PDX1YGR193C YGR026WP53217 278 aa3.22□□□□□ -1.89
PDX1YGR193C CPD1P53314 239 aa3.22□□□□□ -1.89
PDX1YGR193C HHO1P53551 258 aa3.22□□□□□ -1.89
PDX1YGR193C SUR7P54003 302 aa3.22□□□□□ -1.89
PDX1YGR193C SLG1P54867 378 aa3.22□□□□□ -1.89
PDX1YGR193C HHT1P61830 136 aa3.22□□□□□ -1.89
PDX1YGR193C AIM11P87275 137 aa3.22□□□□□ -1.89
PDX1YGR193C RSC9Q03124 581 aa3.22□□□□□ -1.89
PDX1YGR193C YMR178WQ03219 274 aaKnown RBP3.22□□□□□ -1.89
PDX1YGR193C NUP53Q03790 475 aa3.22□□□□□ -1.89
PDX1YGR193C CAC2Q04199 468 aa3.22□□□□□ -1.89
PDX1YGR193C VBA1Q04301 562 aa3.22□□□□□ -1.89
PDX1YGR193C YPR114WQ06107 315 aa3.22□□□□□ -1.89
PDX1YGR193C PBP4Q07362 185 aaKnown RBP3.22□□□□□ -1.89
PDX1YGR193C ATG10Q07879 167 aa3.22□□□□□ -1.89
PDX1YGR193C YOL024WQ08172 172 aa3.22□□□□□ -1.89
PDX1YGR193C RPL7BQ12213 244 aaKnown RBP3.22□□□□□ -1.89
PDX1YGR193C AHA1Q12449 350 aaKnown RBP3.22□□□□□ -1.89
PDX1YGR193C YBR255C-AQ3E776 120 aa3.22□□□□□ -1.89
PDX1YGR193C YCR075W-AQ3E830 75 aa3.22□□□□□ -1.89
PDX1YGR193C YPR014CQ6B0W2 109 aa3.22□□□□□ -1.89
PDX1YGR193C YLR462WO13556 202 aa3.21□□□□□ -1.9
PDX1YGR193C ILV1P00927 576 aaKnown RBP3.21□□□□□ -1.9
PDX1YGR193C YOL163WP0CF20 169 aa3.21□□□□□ -1.9
PDX1YGR193C SPO12P17123 173 aa3.21□□□□□ -1.9
PDX1YGR193C ANB1P19211 157 aa3.21□□□□□ -1.9
PDX1YGR193C TRX3P25372 127 aa3.21□□□□□ -1.9
PDX1YGR193C PEX34P25584 144 aa3.21□□□□□ -1.9
PDX1YGR193C BUB3P26449 341 aa3.21□□□□□ -1.9
PDX1YGR193C TRS65P32893 560 aa3.21□□□□□ -1.9
PDX1YGR193C MRPS5P33759 307 aa3.21□□□□□ -1.9
PDX1YGR193C SFK1P35735 353 aa3.21□□□□□ -1.9
PDX1YGR193C DBP8P38719 431 aa3.21□□□□□ -1.9
PDX1YGR193C YHL026CP38740 315 aa3.21□□□□□ -1.9
PDX1YGR193C LYS1P38998 373 aaRIP-Chip data3.21□□□□□ -1.9 RIP-Chip
PDX1YGR193C MET30P39014 640 aa3.21□□□□□ -1.9
PDX1YGR193C YAL037WP39728 267 aa3.21□□□□□ -1.9
PDX1YGR193C FIS1P40515 155 aa3.21□□□□□ -1.9
PDX1YGR193C YIR035CP40579 254 aa3.21□□□□□ -1.9
PDX1YGR193C YJR012CP47087 207 aa3.21□□□□□ -1.9
PDX1YGR193C MTR3P48240 250 aaPredicted RBP3.21□□□□□ -1.9
PDX1YGR193C COQ5P49017 307 aa3.21□□□□□ -1.9
PDX1YGR193C PYK2P52489 506 aaKnown RBP3.21□□□□□ -1.9
PDX1YGR193C SCS3P53012 380 aa3.21□□□□□ -1.9
PDX1YGR193C COS12P53053 380 aa3.21□□□□□ -1.9
PDX1YGR193C YGR039WP53225 103 aa3.21□□□□□ -1.9
PDX1YGR193C FMP48P53233 369 aa3.21□□□□□ -1.9
PDX1YGR193C YNL095CP53932 642 aa3.21□□□□□ -1.9
PDX1YGR193C RHO4Q00246 291 aa3.21□□□□□ -1.9
PDX1YGR193C STP1Q00947 519 aa3.21□□□□□ -1.9
PDX1YGR193C YPL068CQ02749 293 aa3.21□□□□□ -1.9
PDX1YGR193C VPS28Q02767 242 aa3.21□□□□□ -1.9
PDX1YGR193C FRE8Q12209 686 aa3.21□□□□□ -1.9
PDX1YGR193C PRS5Q12265 496 aaKnown RBP3.21□□□□□ -1.9
PDX1YGR193C RNH203Q12338 110 aa3.21□□□□□ -1.9
PDX1YGR193C YLR118CQ12354 227 aa3.21□□□□□ -1.9
PDX1YGR193C AUS1Q08409 1394 aa3.21□□□□□ -1.9
PDX1YGR193C SRB8P25648 1427 aa3.2□□□□□ -1.9
PDX1YGR193C YER039C-AP0CD97 72 aa3.2□□□□□ -1.9
PDX1YGR193C RPL20AP0CX23 172 aaKnown RBP3.2□□□□□ -1.9
PDX1YGR193C RPL20BP0CX24 172 aaPredicted RBP3.2□□□□□ -1.9
PDX1YGR193C RPL12AP0CX53 165 aaKnown RBP3.2□□□□□ -1.9
PDX1YGR193C RPL12BP0CX54 165 aa3.2□□□□□ -1.9
PDX1YGR193C CPR1P14832 162 aaKnown RBP3.2□□□□□ -1.9
PDX1YGR193C HYP2P23301 157 aaKnown RBP3.2□□□□□ -1.9
PDX1YGR193C MRPL9P31334 269 aa3.2□□□□□ -1.9
PDX1YGR193C SRY1P36007 326 aa3.2□□□□□ -1.9
PDX1YGR193C ERV15P38312 142 aa3.2□□□□□ -1.9
PDX1YGR193C YHR112CP38716 378 aa3.2□□□□□ -1.9
PDX1YGR193C YHR130CP38834 111 aa3.2□□□□□ -1.9
PDX1YGR193C MDM31P38880 579 aa3.2□□□□□ -1.9
PDX1YGR193C YEA4P40004 342 aa3.2□□□□□ -1.9
PDX1YGR193C PHM8P40025 321 aa3.2□□□□□ -1.9
PDX1YGR193C PTR3P43606 678 aa3.2□□□□□ -1.9
PDX1YGR193C BUD13P46947 266 aaPredicted RBP3.2□□□□□ -1.9
PDX1YGR193C MCM22P47167 239 aa3.2□□□□□ -1.9
PDX1YGR193C FHN1P53279 174 aa3.2□□□□□ -1.9
PDX1YGR193C CPR8P53728 308 aa3.2□□□□□ -1.9
PDX1YGR193C YIF1P53845 314 aaKnown RBP3.2□□□□□ -1.9
PDX1YGR193C GPI15P53961 229 aa3.2□□□□□ -1.9
PDX1YGR193C ASI3P53983 676 aa3.2□□□□□ -1.9
PDX1YGR193C YDR366CP87287 132 aa3.2□□□□□ -1.9
PDX1YGR193C ERP1Q05359 219 aaKnown RBP3.2□□□□□ -1.9
PDX1YGR193C SNT309Q06091 175 aaPredicted RBP3.2□□□□□ -1.9
PDX1YGR193C IZH3Q07959 543 aa3.2□□□□□ -1.9
PDX1YGR193C RDL2Q08742 149 aaKnown RBP3.2□□□□□ -1.9
PDX1YGR193C SME1Q12330 94 aaPredicted RBP3.2□□□□□ -1.9
PDX1YGR193C YBR298C-AQ8TGK4 73 aa3.2□□□□□ -1.9
PDX1YGR193C MMS22Q06164 1454 aa3.2□□□□□ -1.9
PDX1YGR193C HAP1P0CE41 1502 aa3.19□□□□□ -1.9
PDX1YGR193C COX5BP00425 151 aa3.19□□□□□ -1.9
PDX1YGR193C MRS1P07266 363 aa3.19□□□□□ -1.9
PDX1YGR193C PEP4P07267 405 aaKnown RBP3.19□□□□□ -1.9
PDX1YGR193C RPS18AP0CX55 146 aaKnown RBP3.19□□□□□ -1.9
PDX1YGR193C RPS18BP0CX56 146 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms