RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA7, Length 357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA7YGR020C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
VMA7YGR020C YPL257WQ08974 193 aa1.75□□□□□ -2.13
VMA7YGR020C FKS1P38631 1876 aaKnown RBP1.75□□□□□ -2.13
VMA7YGR020C RPL9AP05738 191 aaKnown RBP1.74□□□□□ -2.13
VMA7YGR020C PHO88P38264 188 aaPredicted RBP1.74□□□□□ -2.13
VMA7YGR020C BMT5P40493 336 aa1.74□□□□□ -2.13
VMA7YGR020C RPL9BP51401 191 aaKnown RBP1.74□□□□□ -2.13
VMA7YGR020C ERG25P53045 309 aa1.74□□□□□ -2.13
VMA7YGR020C RHO3Q00245 231 aaKnown RBP1.74□□□□□ -2.13
VMA7YGR020C CYT2Q00873 224 aa1.74□□□□□ -2.13
VMA7YGR020C CSM4Q08955 156 aa1.74□□□□□ -2.13
VMA7YGR020C YCT1Q12235 531 aa1.74□□□□□ -2.13
VMA7YGR020C SNU23Q12368 194 aaPredicted RBP1.74□□□□□ -2.13
VMA7YGR020C IPP1P00817 287 aaKnown RBP1.73□□□□□ -2.13
VMA7YGR020C RIB7P33312 244 aa1.73□□□□□ -2.13
VMA7YGR020C BFR1P38934 470 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
VMA7YGR020C GPI8P49018 411 aa1.73□□□□□ -2.13
VMA7YGR020C YNL046WP53956 172 aa1.73□□□□□ -2.13
VMA7YGR020C YOL107WQ12239 342 aa1.73□□□□□ -2.13
VMA7YGR020C SIR4P11978 1358 aa1.72□□□□□ -2.13
VMA7YGR020C MDH2P22133 377 aa1.72□□□□□ -2.13
VMA7YGR020C OAC1P32332 324 aa1.72□□□□□ -2.13
VMA7YGR020C ERV15P38312 142 aa1.72□□□□□ -2.13
VMA7YGR020C YHR022CP38763 256 aa1.72□□□□□ -2.13
VMA7YGR020C YHR127WP38833 243 aaKnown RBP1.72□□□□□ -2.13
VMA7YGR020C VTC1P40046 129 aaRIP-Chip data1.72□□□□□ -2.13not detected
VMA7YGR020C KAP95Q06142 861 aaKnown RBP1.72□□□□□ -2.13
VMA7YGR020C ATG39Q06159 398 aa1.72□□□□□ -2.13
VMA7YGR020C HTL1Q9URQ5 78 aa1.72□□□□□ -2.13
VMA7YGR020C MSW1P04803 379 aa1.71□□□□□ -2.14
VMA7YGR020C SNA3P14359 133 aa1.71□□□□□ -2.14
VMA7YGR020C YPT52P36018 234 aaKnown RBP1.71□□□□□ -2.14
VMA7YGR020C DSE2P38844 325 aa1.71□□□□□ -2.14
VMA7YGR020C YER135CP40082 130 aa1.71□□□□□ -2.14
VMA7YGR020C YKE4P40544 346 aa1.71□□□□□ -2.14
VMA7YGR020C PRM10P42946 383 aa1.71□□□□□ -2.14
VMA7YGR020C NEJ1Q06148 342 aa1.71□□□□□ -2.14
VMA7YGR020C DCN1Q12395 269 aa1.71□□□□□ -2.14
VMA7YGR020C RRP36Q12481 300 aaPredicted RBP1.71□□□□□ -2.14
VMA7YGR020C YOL162WP0CF19 215 aa1.7□□□□□ -2.14
VMA7YGR020C RSR1P13856 272 aa1.7□□□□□ -2.14
VMA7YGR020C MSH5Q12175 901 aa1.7□□□□□ -2.14
VMA7YGR020C USB1Q12208 290 aaKnown RBP1.7□□□□□ -2.14
VMA7YGR020C YOR029WQ12243 111 aa1.7□□□□□ -2.14
VMA7YGR020C DDI2P0CH63 225 aa1.69□□□□□ -2.14
VMA7YGR020C DDI3P0CH64 225 aa1.69□□□□□ -2.14
VMA7YGR020C GRX2P17695 143 aaKnown RBP1.69□□□□□ -2.14
VMA7YGR020C YAR068WP39564 161 aa1.69□□□□□ -2.14
VMA7YGR020C YIL001WP40560 513 aa1.69□□□□□ -2.14
VMA7YGR020C YJR056CP47115 236 aa1.69□□□□□ -2.14
VMA7YGR020C SEI1Q06058 285 aa1.69□□□□□ -2.14
VMA7YGR020C ARR2Q06597 130 aa1.69□□□□□ -2.14
VMA7YGR020C ERD2P18414 219 aa1.68□□□□□ -2.14
VMA7YGR020C RPF1P38805 295 aaKnown RBP1.68□□□□□ -2.14
VMA7YGR020C YHR180WP38868 163 aa1.68□□□□□ -2.14
VMA7YGR020C RPA43P46669 326 aa1.68□□□□□ -2.14
VMA7YGR020C HAM1P47119 197 aaKnown RBP1.68□□□□□ -2.14
VMA7YGR020C YJR079WP47126 109 aa1.68□□□□□ -2.14
VMA7YGR020C JHD2P47156 728 aaPredicted RBP1.68□□□□□ -2.14
VMA7YGR020C HEM25Q07534 307 aa1.68□□□□□ -2.14
VMA7YGR020C MSA1Q08471 629 aa1.68□□□□□ -2.14
VMA7YGR020C NIP7Q08962 181 aaKnown RBP1.68□□□□□ -2.14
VMA7YGR020C YOR020W-AQ3E824 90 aa1.68□□□□□ -2.14
VMA7YGR020C YKR045CP36138 183 aa1.67□□□□□ -2.14
VMA7YGR020C TCP1P12612 559 aaKnown RBP1.66□□□□□ -2.14
VMA7YGR020C FCY2P17064 533 aa1.66□□□□□ -2.14
VMA7YGR020C RPS5P26783 225 aaKnown RBP1.66□□□□□ -2.14
VMA7YGR020C RPT5P33297 434 aaKnown RBP1.66□□□□□ -2.14
VMA7YGR020C YKL075CP36083 450 aa1.66□□□□□ -2.14
VMA7YGR020C YMR144WP40214 342 aaKnown RBP1.66□□□□□ -2.14
VMA7YGR020C CAT5P41735 233 aa1.66□□□□□ -2.14
VMA7YGR020C BNA6P43619 295 aa1.66□□□□□ -2.14
VMA7YGR020C ILM1P47155 203 aa1.66□□□□□ -2.14
VMA7YGR020C YUH1P35127 236 aa1.65□□□□□ -2.15
VMA7YGR020C ECM33P38248 429 aaKnown RBP1.65□□□□□ -2.15
VMA7YGR020C YBR219CP38317 127 aa1.65□□□□□ -2.15
VMA7YGR020C AVT2P39981 480 aa1.65□□□□□ -2.15
VMA7YGR020C AGE2P40529 298 aa1.65□□□□□ -2.15
VMA7YGR020C BUD25P85052 153 aa1.65□□□□□ -2.15
VMA7YGR020C RRT8Q08219 342 aa1.65□□□□□ -2.15
VMA7YGR020C TPO4Q12256 659 aa1.65□□□□□ -2.15
VMA7YGR020C YLR126CQ12288 251 aa1.65□□□□□ -2.15
VMA7YGR020C HOC1P47124 396 aa1.64□□□□□ -2.15
VMA7YGR020C MRPL50P53724 139 aa1.64□□□□□ -2.15
VMA7YGR020C YNR062CP53748 327 aa1.64□□□□□ -2.15
VMA7YGR020C SSQ1Q05931 657 aaPredicted RBP1.64□□□□□ -2.15
VMA7YGR020C PAM18Q07914 168 aa1.64□□□□□ -2.15
VMA7YGR020C YPL229WQ99395 206 aa1.64□□□□□ -2.15
VMA7YGR020C PET9P18239 318 aaKnown RBP1.63□□□□□ -2.15
VMA7YGR020C YBR063CP38083 404 aa1.63□□□□□ -2.15
VMA7YGR020C SVP26P38869 228 aa1.63□□□□□ -2.15
VMA7YGR020C TOS8P53147 276 aa1.63□□□□□ -2.15
VMA7YGR020C YLR173WQ06247 608 aa1.63□□□□□ -2.15
VMA7YGR020C YGL010WP25338 174 aa1.62□□□□□ -2.15
VMA7YGR020C RIB1P38066 345 aa1.62□□□□□ -2.15
VMA7YGR020C YNL134CP53912 376 aaKnown RBP1.62□□□□□ -2.15
VMA7YGR020C KRE28Q04431 385 aa1.62□□□□□ -2.15
VMA7YGR020C YML096WQ04489 525 aa1.62□□□□□ -2.15
VMA7YGR020C ATG31Q12421 196 aa1.62□□□□□ -2.15
VMA7YGR020C CDC8P00572 216 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms