RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C YLR126CQ12288 251 aa2.37□□□□□ -2.03
TCA17YEL048C DCN1Q12395 269 aa2.37□□□□□ -2.03
TCA17YEL048C EMP46Q12396 444 aa2.37□□□□□ -2.03
TCA17YEL048C YBL112CQ3E7Y4 105 aa2.37□□□□□ -2.03
TCA17YEL048C YLR462WO13556 202 aa2.36□□□□□ -2.03
TCA17YEL048C RPL26AP05743 127 aaKnown RBP2.36□□□□□ -2.03
TCA17YEL048C SNA3P14359 133 aa2.36□□□□□ -2.03
TCA17YEL048C ERD2P18414 219 aa2.36□□□□□ -2.03
TCA17YEL048C TOM40P23644 387 aaKnown RBP2.36□□□□□ -2.03
TCA17YEL048C NTF2P33331 125 aaKnown RBP2.36□□□□□ -2.03
TCA17YEL048C MIC12P38341 106 aa2.36□□□□□ -2.03
TCA17YEL048C URA8P38627 578 aaPredicted RBP2.36□□□□□ -2.03
TCA17YEL048C YEL075CP39972 122 aa2.36□□□□□ -2.03
TCA17YEL048C HAM1P47119 197 aaKnown RBP2.36□□□□□ -2.03
TCA17YEL048C RMR1P53060 241 aa2.36□□□□□ -2.03
TCA17YEL048C RPL26BP53221 127 aaKnown RBP2.36□□□□□ -2.03
TCA17YEL048C FYV6P53913 173 aa2.36□□□□□ -2.03
TCA17YEL048C MRPS17Q03246 237 aaPredicted RBP2.36□□□□□ -2.03
TCA17YEL048C GRH1Q04410 372 aaKnown RBP2.36□□□□□ -2.03
TCA17YEL048C FAR8Q05040 523 aa2.36□□□□□ -2.03
TCA17YEL048C CDC123Q05791 360 aa2.36□□□□□ -2.03
TCA17YEL048C YOL019WQ08157 551 aa2.36□□□□□ -2.03
TCA17YEL048C VPS68Q12016 184 aa2.36□□□□□ -2.03
TCA17YEL048C YPL247CQ12523 523 aa2.36□□□□□ -2.03
TCA17YEL048C PRP18P33411 251 aaPredicted RBP2.35□□□□□ -2.03
TCA17YEL048C RTC3P38804 111 aaPredicted RBP2.35□□□□□ -2.03
TCA17YEL048C ERG28P40030 148 aa2.35□□□□□ -2.03
TCA17YEL048C YJR149WP47177 404 aa2.35□□□□□ -2.03
TCA17YEL048C RAD17P48581 401 aa2.35□□□□□ -2.03
TCA17YEL048C YNL046WP53956 172 aa2.35□□□□□ -2.03
TCA17YEL048C DID2P69771 204 aa2.35□□□□□ -2.03
TCA17YEL048C EMI1Q04406 187 aa2.35□□□□□ -2.03
TCA17YEL048C YMR114CQ04471 368 aaKnown RBP2.35□□□□□ -2.03
TCA17YEL048C FCF1Q05498 189 aaPredicted RBP2.35□□□□□ -2.03
TCA17YEL048C HEM25Q07534 307 aa2.35□□□□□ -2.03
TCA17YEL048C TPO4Q12256 659 aa2.35□□□□□ -2.03
TCA17YEL048C GIS3Q12418 502 aa2.35□□□□□ -2.03
TCA17YEL048C ARG80P07249 177 aa2.34□□□□□ -2.03
TCA17YEL048C CDC33P07260 213 aaKnown RBP2.34□□□□□ -2.03
TCA17YEL048C COS8P38723 381 aa2.34□□□□□ -2.03
TCA17YEL048C BRR6P53062 197 aa2.34□□□□□ -2.03
TCA17YEL048C CGI121Q03705 181 aaKnown RBP2.34□□□□□ -2.03
TCA17YEL048C JLP1Q12358 412 aa2.34□□□□□ -2.03
TCA17YEL048C AGC1Q12482 902 aa2.34□□□□□ -2.03
TCA17YEL048C NOT5Q12514 560 aaPredicted RBP2.34□□□□□ -2.03
TCA17YEL048C YKL183C-AQ3E765 70 aa2.34□□□□□ -2.03
TCA17YEL048C LSO2Q3E772 92 aaKnown RBP2.34□□□□□ -2.03
TCA17YEL048C RPL28P02406 149 aaKnown RBP2.33□□□□□ -2.04
TCA17YEL048C CDC36P06100 191 aaPredicted RBP2.33□□□□□ -2.04
TCA17YEL048C SEC22P22214 214 aa2.33□□□□□ -2.04
TCA17YEL048C RFC4P40339 323 aaKnown RBP2.33□□□□□ -2.04
TCA17YEL048C RSM25P40496 264 aa2.33□□□□□ -2.04
TCA17YEL048C IRC18P47056 224 aa2.33□□□□□ -2.04
TCA17YEL048C NUP57P48837 541 aa2.33□□□□□ -2.04
TCA17YEL048C TRM9P49957 279 aa2.33□□□□□ -2.04
TCA17YEL048C CUS2P53830 285 aaPredicted RBP2.33□□□□□ -2.04
TCA17YEL048C ABF2Q02486 183 aa2.33□□□□□ -2.04
TCA17YEL048C SSQ1Q05931 657 aaPredicted RBP2.33□□□□□ -2.04
TCA17YEL048C YPR172WQ06608 200 aa2.33□□□□□ -2.04
TCA17YEL048C GET4Q12125 312 aa2.33□□□□□ -2.04
TCA17YEL048C YPR011CQ12251 326 aa2.33□□□□□ -2.04
TCA17YEL048C IPP1P00817 287 aaKnown RBP2.32□□□□□ -2.04
TCA17YEL048C ADH3P07246 375 aaKnown RBP2.32□□□□□ -2.04
TCA17YEL048C URA6P15700 204 aa2.32□□□□□ -2.04
TCA17YEL048C PRX1P34227 261 aaKnown RBP2.32□□□□□ -2.04
TCA17YEL048C CBT1P36038 271 aaPredicted RBP2.32□□□□□ -2.04
TCA17YEL048C OST2P46964 130 aa2.32□□□□□ -2.04
TCA17YEL048C MGA1P53050 456 aa2.32□□□□□ -2.04
TCA17YEL048C MDM34P53083 459 aa2.32□□□□□ -2.04
TCA17YEL048C YGL034CP53186 121 aa2.32□□□□□ -2.04
TCA17YEL048C GIM3P53900 129 aa2.32□□□□□ -2.04
TCA17YEL048C INM2Q05533 292 aa2.32□□□□□ -2.04
TCA17YEL048C YPL257WQ08974 193 aa2.32□□□□□ -2.04
TCA17YEL048C GEP5Q12393 293 aa2.32□□□□□ -2.04
TCA17YEL048C HTL1Q9URQ5 78 aa2.32□□□□□ -2.04
TCA17YEL048C BEM2P39960 2167 aaKnown RBP2.32□□□□□ -2.04
TCA17YEL048C SGA1P08019 549 aa2.31□□□□□ -2.04
TCA17YEL048C DPM1P14020 267 aaKnown RBP2.31□□□□□ -2.04
TCA17YEL048C IDH1P28834 360 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
TCA17YEL048C RCN1P36054 211 aa2.31□□□□□ -2.04
TCA17YEL048C IKI1P38874 309 aa2.31□□□□□ -2.04
TCA17YEL048C YNL194CP40169 301 aa2.31□□□□□ -2.04
TCA17YEL048C TIF34P40217 347 aaKnown RBP2.31□□□□□ -2.04
TCA17YEL048C YJR146WP47174 117 aa2.31□□□□□ -2.04
TCA17YEL048C YMR279CQ03263 540 aa2.31□□□□□ -2.04
TCA17YEL048C ABP140Q08641 628 aaKnown RBP2.31□□□□□ -2.04
TCA17YEL048C YOR020W-AQ3E824 90 aa2.31□□□□□ -2.04
TCA17YEL048C RAD10P06838 210 aa2.3□□□□□ -2.04
TCA17YEL048C SCO1P23833 295 aa2.3□□□□□ -2.04
TCA17YEL048C ERG24P32462 438 aaKnown RBP2.3□□□□□ -2.04
TCA17YEL048C PEX17P40155 199 aa2.3□□□□□ -2.04
TCA17YEL048C YJR056CP47115 236 aa2.3□□□□□ -2.04
TCA17YEL048C ADO1P47143 340 aaKnown RBP2.3□□□□□ -2.04
TCA17YEL048C CWC23P52868 283 aaPredicted RBP2.3□□□□□ -2.04
TCA17YEL048C TOS8P53147 276 aa2.3□□□□□ -2.04
TCA17YEL048C GTR2P53290 341 aa2.3□□□□□ -2.04
TCA17YEL048C YML096WQ04489 525 aa2.3□□□□□ -2.04
TCA17YEL048C ATG38Q05789 226 aaKnown RBP2.3□□□□□ -2.04
TCA17YEL048C SWI1P09547 1314 aa2.29□□□□□ -2.04
TCA17YEL048C RPL27AP0C2H6 136 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms