RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W MMT1Q03218 510 aa1.78□□□□□ -2.12
SIR4YDR227W SEC13Q04491 297 aaKnown RBP1.78□□□□□ -2.12
SIR4YDR227W RGC1Q06108 1083 aaKnown RBP1.78□□□□□ -2.12
SIR4YDR227W APC9Q12107 265 aa1.78□□□□□ -2.12
SIR4YDR227W YLR046CQ12253 270 aa1.78□□□□□ -2.12
SIR4YDR227W YOP1Q12402 180 aa1.78□□□□□ -2.12
SIR4YDR227W PSF1Q12488 208 aa1.78□□□□□ -2.12
SIR4YDR227W KIN28P06242 306 aa1.78□□□□□ -2.12
SIR4YDR227W ARF1P11076 181 aaKnown RBP1.78□□□□□ -2.12
SIR4YDR227W UPS2P35200 230 aa1.78□□□□□ -2.12
SIR4YDR227W SHG1P38337 142 aa1.78□□□□□ -2.12
SIR4YDR227W HPM1P40481 377 aa1.78□□□□□ -2.12
SIR4YDR227W MKC7P53379 596 aa1.78□□□□□ -2.12
SIR4YDR227W RCE1Q03530 315 aa1.78□□□□□ -2.12
SIR4YDR227W RKM5Q12367 367 aa1.78□□□□□ -2.12
SIR4YDR227W LRE1P25579 583 aaKnown RBP1.77□□□□□ -2.13
SIR4YDR227W SDH4P37298 181 aa1.77□□□□□ -2.13
SIR4YDR227W SBE22P38814 852 aa1.77□□□□□ -2.13
SIR4YDR227W POP6P53218 158 aa1.77□□□□□ -2.13
SIR4YDR227W NUP100Q02629 959 aa1.77□□□□□ -2.13
SIR4YDR227W HRI1Q05905 244 aaKnown RBP1.77□□□□□ -2.13
SIR4YDR227W YPL199CQ08954 240 aa1.77□□□□□ -2.13
SIR4YDR227W YPR064WQ12492 139 aa1.77□□□□□ -2.13
SIR4YDR227W PHO80P20052 293 aa1.77□□□□□ -2.13
SIR4YDR227W MRPL20P22354 195 aaPredicted RBP1.77□□□□□ -2.13
SIR4YDR227W YCR101CP25607 182 aa1.77□□□□□ -2.13
SIR4YDR227W YPT53P36019 220 aa1.77□□□□□ -2.13
SIR4YDR227W AIM29P36154 155 aa1.77□□□□□ -2.13
SIR4YDR227W YHR127WP38833 243 aaKnown RBP1.77□□□□□ -2.13
SIR4YDR227W IKI1P38874 309 aa1.77□□□□□ -2.13
SIR4YDR227W ECM10P39987 644 aa1.77□□□□□ -2.13
SIR4YDR227W LCP5P40079 357 aaPredicted RBP1.77□□□□□ -2.13
SIR4YDR227W RFC2P40348 353 aa1.77□□□□□ -2.13
SIR4YDR227W YFL064CP43540 174 aa1.77□□□□□ -2.13
SIR4YDR227W MDM34P53083 459 aa1.77□□□□□ -2.13
SIR4YDR227W DIG1Q03063 452 aaKnown RBP1.77□□□□□ -2.13
SIR4YDR227W YPR202WQ08993 238 aa1.77□□□□□ -2.13
SIR4YDR227W ATG31Q12421 196 aa1.77□□□□□ -2.13
SIR4YDR227W EAF3Q12432 401 aa1.77□□□□□ -2.13
SIR4YDR227W ADE4P04046 510 aaKnown RBP1.77□□□□□ -2.13
SIR4YDR227W RPS1BP23248 255 aaKnown RBP1.77□□□□□ -2.13
SIR4YDR227W MSN2P33748 704 aa1.77□□□□□ -2.13
SIR4YDR227W ECM14P38836 430 aa1.77□□□□□ -2.13
SIR4YDR227W FLO5P38894 1075 aa1.77□□□□□ -2.13
SIR4YDR227W GAT2P40209 560 aa1.77□□□□□ -2.13
SIR4YDR227W HAM1P47119 197 aaKnown RBP1.77□□□□□ -2.13
SIR4YDR227W FYV6P53913 173 aa1.77□□□□□ -2.13
SIR4YDR227W YDL177CQ12257 170 aa1.77□□□□□ -2.13
SIR4YDR227W PRE7P23724 241 aaKnown RBP1.76□□□□□ -2.13
SIR4YDR227W VPH2P32341 215 aa1.76□□□□□ -2.13
SIR4YDR227W AEP1P32493 518 aa1.76□□□□□ -2.13
SIR4YDR227W YCR087C-AP37263 153 aa1.76□□□□□ -2.13
SIR4YDR227W TFG2P41896 400 aaPredicted RBP1.76□□□□□ -2.13
SIR4YDR227W FRE4P53746 719 aa1.76□□□□□ -2.13
SIR4YDR227W SDH7Q04401 133 aa1.76□□□□□ -2.13
SIR4YDR227W SFH1Q06168 426 aa1.76□□□□□ -2.13
SIR4YDR227W YPL264CQ08980 353 aa1.76□□□□□ -2.13
SIR4YDR227W RTR2Q12378 196 aa1.76□□□□□ -2.13
SIR4YDR227W NPC2Q12408 173 aa1.76□□□□□ -2.13
SIR4YDR227W SPO23P33757 523 aa1.76□□□□□ -2.13
SIR4YDR227W YBP1P38315 674 aa1.76□□□□□ -2.13
SIR4YDR227W YFL067WP43537 175 aa1.76□□□□□ -2.13
SIR4YDR227W EFM3P47163 339 aa1.76□□□□□ -2.13
SIR4YDR227W ERG26P53199 349 aaKnown RBP1.76□□□□□ -2.13
SIR4YDR227W QCR7P00128 127 aa1.76□□□□□ -2.13
SIR4YDR227W CNB1P25296 175 aa1.76□□□□□ -2.13
SIR4YDR227W YRA2P36036 203 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SIR4YDR227W PHD1P36093 366 aa1.76□□□□□ -2.13
SIR4YDR227W RIM2P38127 377 aa1.76□□□□□ -2.13
SIR4YDR227W YBR242WP38331 238 aa1.76□□□□□ -2.13
SIR4YDR227W MTC4P38335 694 aaKnown RBP1.76□□□□□ -2.13
SIR4YDR227W SAS2P40963 338 aa1.76□□□□□ -2.13
SIR4YDR227W SBH1P52870 82 aa1.76□□□□□ -2.13
SIR4YDR227W CPR8P53728 308 aa1.76□□□□□ -2.13
SIR4YDR227W GIS2P53849 153 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SIR4YDR227W RIM13Q03792 727 aa1.76□□□□□ -2.13
SIR4YDR227W SLD7Q08457 257 aa1.76□□□□□ -2.13
SIR4YDR227W REP2P03872 296 aa1.76□□□□□ -2.13
SIR4YDR227W CHO1P08456 276 aa1.76□□□□□ -2.13
SIR4YDR227W TUB1P09733 447 aaKnown RBP1.76□□□□□ -2.13
SIR4YDR227W UBR1P19812 1950 aa1.76□□□□□ -2.13
SIR4YDR227W MTC7P32633 139 aa1.76□□□□□ -2.13
SIR4YDR227W VPS21P36017 210 aaKnown RBP1.76□□□□□ -2.13
SIR4YDR227W CAB4P53332 305 aa1.76□□□□□ -2.13
SIR4YDR227W HHT1P61830 136 aa1.76□□□□□ -2.13
SIR4YDR227W DID2P69771 204 aa1.76□□□□□ -2.13
SIR4YDR227W SSK1Q07084 712 aa1.76□□□□□ -2.13
SIR4YDR227W TMC1Q08422 150 aaPredicted RBP1.76□□□□□ -2.13
SIR4YDR227W NUM1Q00402 2748 aa1.75□□□□□ -2.13
SIR4YDR227W STE7P06784 515 aa1.75□□□□□ -2.13
SIR4YDR227W ARF2P19146 181 aaKnown RBP1.75□□□□□ -2.13
SIR4YDR227W ADE1P27616 306 aa1.75□□□□□ -2.13
SIR4YDR227W IMP1P28627 190 aa1.75□□□□□ -2.13
SIR4YDR227W CDC5P32562 705 aa1.75□□□□□ -2.13
SIR4YDR227W SFK1P35735 353 aa1.75□□□□□ -2.13
SIR4YDR227W YPT31P38555 223 aaKnown RBP1.75□□□□□ -2.13
SIR4YDR227W FHN1P53279 174 aa1.75□□□□□ -2.13
SIR4YDR227W PRP11Q07350 266 aaPredicted RBP1.75□□□□□ -2.13
SIR4YDR227W SNX3Q08826 162 aaKnown RBP1.75□□□□□ -2.13
SIR4YDR227W HAP3P13434 144 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms