RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC18	YBR080C	FDH1	Q08911	376 aa		4.89	□□□□□ -1.63
SEC18	YBR080C	YOR289W	Q12012	251 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC18	YBR080C	YLR112W	Q12130	139 aa		4.89	□□□□□ -1.63
SEC18	YBR080C	CSR2	Q12734	1121 aa		4.89	□□□□□ -1.63
SEC18	YBR080C	IRC20	Q06554	1556 aa		4.89	□□□□□ -1.63
SEC18	YBR080C	KIN28	P06242	306 aa		4.89	□□□□□ -1.63
SEC18	YBR080C	MRS3	P10566	314 aa		4.89	□□□□□ -1.63
SEC18	YBR080C	LHP1	P33399	275 aa	Known RBP	4.89	□□□□□ -1.63
SEC18	YBR080C	RBL2	P48606	106 aa	Known RBP	4.89	□□□□□ -1.63
SEC18	YBR080C	YMR181C	Q03231	154 aa		4.89	□□□□□ -1.63
SEC18	YBR080C	TDA1	Q03533	586 aa		4.89	□□□□□ -1.63
SEC18	YBR080C	BI2	P03873	423 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	ARN2	P38724	620 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	TRR2	P38816	342 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	AIM25	P47140	327 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	YOR186W	Q08560	144 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	OSW1	Q08692	278 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	HMS1	Q12398	434 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	UBI4	P0CG63	381 aa	Known RBP	4.88	□□□□□ -1.63
SEC18	YBR080C	NMT1	P14743	455 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	MRPS28	P21771	286 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	ILV6	P25605	309 aa	Known RBP	4.88	□□□□□ -1.63
SEC18	YBR080C	RPL16A	P26784	199 aa	Known RBP	4.88	□□□□□ -1.63
SEC18	YBR080C	HRR25	P29295	494 aa	Known RBP	4.88	□□□□□ -1.63
SEC18	YBR080C	DOG2	P38773	246 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	PEX22	P39718	180 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	CCC1	P47818	322 aa		4.88	□□□□□ -1.63
SEC18	YBR080C	VPS15	P22219	1454 aa		4.87	□□□□□ -1.63
SEC18	YBR080C	ATG2	P53855	1592 aa		4.87	□□□□□ -1.63
SEC18	YBR080C	SAM2	P19358	384 aa	Known RBP	4.87	□□□□□ -1.63
SEC18	YBR080C	FUN26	P31381	517 aa		4.87	□□□□□ -1.63
SEC18	YBR080C	SIP2	P34164	415 aa	Known RBP	4.87	□□□□□ -1.63
SEC18	YBR080C	FLC3	P53121	802 aa		4.87	□□□□□ -1.63
SEC18	YBR080C	INM2	Q05533	292 aa		4.87	□□□□□ -1.63
SEC18	YBR080C	YHC1	Q05900	231 aa	Known RBP	4.87	□□□□□ -1.63
SEC18	YBR080C	YOL160W	Q08321	113 aa		4.87	□□□□□ -1.63
SEC18	YBR080C	ERV2	Q12284	196 aa		4.87	□□□□□ -1.63
SEC18	YBR080C	CDC8	P00572	216 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	HEM4	P06174	275 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	FCY2	P17064	533 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	ERG24	P32462	438 aa	Known RBP	4.86	□□□□□ -1.63
SEC18	YBR080C	FMP23	P38231	175 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	YGP1	P38616	354 aa	Known RBP	4.86	□□□□□ -1.63
SEC18	YBR080C	RRG9	P40156	214 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	YGL039W	P53183	348 aa	Known RBP	4.86	□□□□□ -1.63
SEC18	YBR080C	YLR030W	Q07967	263 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	HRD1	Q08109	551 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	DAS2	Q12084	232 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	RPS1B	P23248	255 aa	Known RBP	4.86	□□□□□ -1.63
SEC18	YBR080C	RNA14	P25298	677 aa	Known RBP	4.86	□□□□□ -1.63
SEC18	YBR080C	FMP41	P53889	259 aa	Known RBP	4.86	□□□□□ -1.63
SEC18	YBR080C	FRQ1	Q06389	190 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	BSP1	Q06604	576 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	PST2	Q12335	198 aa	Known RBP	4.86	□□□□□ -1.63
SEC18	YBR080C	PEX11	Q12462	236 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	MHT1	Q12525	324 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	YBL112C	Q3E7Y4	105 aa		4.86	□□□□□ -1.63
SEC18	YBR080C	MRPL20	P22354	195 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC18	YBR080C	UBP5	P39944	805 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	GLE2	P40066	365 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	LIP2	Q06005	328 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	YOR292C	Q08743	309 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	YPL225W	Q08971	146 aa	Known RBP	4.85	□□□□□ -1.63
SEC18	YBR080C	YOR304C-A	O14468	76 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	CMD1	P06787	147 aa	Known RBP	4.85	□□□□□ -1.63
SEC18	YBR080C	SCL1	P21243	252 aa	Known RBP	4.85	□□□□□ -1.63
SEC18	YBR080C	MIR1	P23641	311 aa	Known RBP	4.85	□□□□□ -1.63
SEC18	YBR080C	AHC2	P25649	128 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	EFM1	P38732	585 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	SOL1	P50278	321 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	MRH4	P53166	561 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	UBC7	Q02159	165 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	ARL3	Q02804	198 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	YMR317W	Q04893	1140 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	LDB18	Q07887	179 aa		4.85	□□□□□ -1.63
SEC18	YBR080C	SNX3	Q08826	162 aa	Known RBP	4.85	□□□□□ -1.63
SEC18	YBR080C	HCM1	P25364	564 aa		4.84	□□□□□ -1.63
SEC18	YBR080C	BUB2	P26448	306 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC18	YBR080C	SUA7	P29055	345 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC18	YBR080C	APS1	P35181	156 aa		4.84	□□□□□ -1.63
SEC18	YBR080C	PMU1	P36069	295 aa		4.84	□□□□□ -1.63
SEC18	YBR080C	MTC6	P38849	526 aa		4.84	□□□□□ -1.63
SEC18	YBR080C	LCB3	P47013	409 aa		4.84	□□□□□ -1.63
SEC18	YBR080C	LSM7	P53905	115 aa	Known RBP	4.84	□□□□□ -1.63
SEC18	YBR080C	CYC3	P06182	269 aa		4.84	□□□□□ -1.64
SEC18	YBR080C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
SEC18	YBR080C	OAR1	P35731	278 aa		4.84	□□□□□ -1.64
SEC18	YBR080C	YNK1	P36010	153 aa	Known RBP	4.84	□□□□□ -1.64
SEC18	YBR080C	MRP21	P38175	177 aa		4.84	□□□□□ -1.64
SEC18	YBR080C	BAT1	P38891	393 aa	Known RBP	4.84	□□□□□ -1.64
SEC18	YBR080C	YNL234W	P53857	426 aa		4.84	□□□□□ -1.64
SEC18	YBR080C	PAL1	Q05518	499 aa	Known RBP	4.84	□□□□□ -1.64
SEC18	YBR080C	YOR376W	Q08900	122 aa		4.84	□□□□□ -1.64
SEC18	YBR080C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.84	□□□□□ -1.64
SEC18	YBR080C	CAT8	P39113	1433 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	DNF1	P32660	1571 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	TOD6	P34219	525 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	MIX23	P38162	196 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	VPS25	P47142	202 aa		4.83	□□□□□ -1.64
SEC18	YBR080C	TDA7	P53882	636 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms