RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SSO1	YPL232W	SOD2	P00447	233 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	RNA14	P25298	677 aa	Known RBP	4.1	□□□□□ -1.75
SSO1	YPL232W	FEN2	P25621	512 aa	Known RBP	4.1	□□□□□ -1.75
SSO1	YPL232W	DOA4	P32571	926 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	MTH1	P35198	433 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	YFL015C	P43578	164 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	PHB2	P50085	310 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	MIG2	P53035	382 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	YGL159W	P53110	370 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	MRH4	P53166	561 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	PRM8	P53174	237 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	NQM1	P53228	333 aa	Predicted RBP	4.1	□□□□□ -1.75
SSO1	YPL232W	SUB1	P54000	292 aa	Known RBP	4.1	□□□□□ -1.75
SSO1	YPL232W	NOG1	Q02892	647 aa	Known RBP	4.1	□□□□□ -1.75
SSO1	YPL232W	MIX17	Q03667	156 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	GAL83	Q04739	417 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	DAL4	Q04895	635 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	SPR28	Q04921	423 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	FCY1	Q12178	158 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	BBP1	Q12365	385 aa		4.1	□□□□□ -1.75
SSO1	YPL232W	TPK3	P05986	398 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	SPS4	P09937	338 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	MDM10	P18409	493 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	OLE1	P21147	510 aa	Known RBP	4.09	□□□□□ -1.75
SSO1	YPL232W	AFG1	P32317	509 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	ZRT3	P34240	503 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	NAT2	P37293	288 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	SDH4	P37298	181 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	THI2	P38141	450 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	SBE22	P38814	852 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	VPS55	P47111	140 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	CCC1	P47818	322 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	OKP1	P53298	406 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	NRK1	P53915	240 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	HOR7	Q05827	59 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	LIP2	Q06005	328 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	RFM1	Q12192	310 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	YLR126C	Q12288	251 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	ATO3	Q12359	275 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	MPD1	Q12404	318 aa	Known RBP	4.09	□□□□□ -1.75
SSO1	YPL232W	YOL159C-A	Q3E769	90 aa		4.09	□□□□□ -1.75
SSO1	YPL232W	ADE8	P04161	214 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	CDC10	P25342	322 aa	Known RBP	4.08	□□□□□ -1.76
SSO1	YPL232W	IMP1	P28627	190 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	ECM1	P39715	212 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	YND1	P40009	630 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	YJR056C	P47115	236 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	COS10	P52924	374 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	VOA1	P53262	265 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	YNL234W	P53857	426 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	ACT1	P60010	375 aa	Known RBP	4.08	□□□□□ -1.76
SSO1	YPL232W	RPL21A	Q02753	160 aa	Known RBP	4.08	□□□□□ -1.76
SSO1	YPL232W	BCP1	Q06338	283 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	RPL21B	Q12672	160 aa	Known RBP	4.08	□□□□□ -1.76
SSO1	YPL232W	YGR161W-C	Q3E744	92 aa		4.08	□□□□□ -1.76
SSO1	YPL232W	TFC1	P32367	649 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	COQ2	P32378	372 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	UTR5	P32630	166 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	PPZ2	P33329	710 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	PMU1	P36069	295 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	PRS4	P38063	326 aa	Predicted RBP	4.07	□□□□□ -1.76
SSO1	YPL232W	PAC2	P39937	518 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	MAM33	P40513	266 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	SKP1	P52286	194 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	YGR054W	P53235	642 aa	Known RBP	4.07	□□□□□ -1.76
SSO1	YPL232W	SLI1	P53304	468 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	SPC2	Q04969	178 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	UPS1	Q05776	175 aa		4.07	□□□□□ -1.76
SSO1	YPL232W	KIN28	P06242	306 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	HEM13	P11353	328 aa	Known RBP	4.06	□□□□□ -1.76
SSO1	YPL232W	FBA1	P14540	359 aa	Known RBP	4.06	□□□□□ -1.76
SSO1	YPL232W	RPA135	P22138	1203 aa	Known RBP	4.06	□□□□□ -1.76
SSO1	YPL232W	ATG22	P25568	528 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	PEP12	P32854	288 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	SOP4	P39543	234 aa	Predicted RBP	4.06	□□□□□ -1.76
SSO1	YPL232W	RRG9	P40156	214 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	RIO2	P40160	425 aa	Known RBP	4.06	□□□□□ -1.76
SSO1	YPL232W	TTI2	P47168	421 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	YGR016W	P53209	190 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	SAY1	P53324	424 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	ARP10	Q04549	284 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	MSC3	Q05812	728 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	YLR173W	Q06247	608 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	YDL086W	Q07505	273 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	HUT1	Q12520	339 aa		4.06	□□□□□ -1.76
SSO1	YPL232W	CDC28	P00546	298 aa	Known RBP	4.05	□□□□□ -1.76
SSO1	YPL232W	SNF4	P12904	322 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	DPB2	P24482	689 aa	Predicted RBP	4.05	□□□□□ -1.76
SSO1	YPL232W	CPR5	P35176	225 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	SPC34	P36131	295 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	DLS1	P40366	167 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	WWM1	P43582	211 aa	Known RBP	4.05	□□□□□ -1.76
SSO1	YPL232W	MRX5	P47007	382 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	SSN8	P47821	323 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	YGR151C	P53287	111 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	CAB4	P53332	305 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	YMR087W	Q04299	284 aa		4.05	□□□□□ -1.76
SSO1	YPL232W	GRH1	Q04410	372 aa	Known RBP	4.05	□□□□□ -1.76
SSO1	YPL232W	MRX9	Q07349	420 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms