RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W YNL194CP40169 301 aa2.93□□□□□ -1.94
HSH49YOR319W COS4P43542 379 aa2.93□□□□□ -1.94
HSH49YOR319W CPR7P47103 393 aa2.93□□□□□ -1.94
HSH49YOR319W MCM22P47167 239 aa2.93□□□□□ -1.94
HSH49YOR319W CWC23P52868 283 aaPredicted RBP2.93□□□□□ -1.94
HSH49YOR319W SNZ2P53824 298 aa2.93□□□□□ -1.94
HSH49YOR319W GOT1Q03554 138 aa2.93□□□□□ -1.94
HSH49YOR319W TVP15Q03860 143 aa2.93□□□□□ -1.94
HSH49YOR319W MRX8Q05473 314 aa2.93□□□□□ -1.94
HSH49YOR319W SEI1Q06058 285 aa2.93□□□□□ -1.94
HSH49YOR319W SYC1Q08553 188 aaPredicted RBP2.93□□□□□ -1.94
HSH49YOR319W YLR126CQ12288 251 aa2.93□□□□□ -1.94
HSH49YOR319W ATG5Q12380 294 aa2.93□□□□□ -1.94
HSH49YOR319W DCN1Q12395 269 aa2.93□□□□□ -1.94
HSH49YOR319W YPK2P18961 677 aa2.92□□□□□ -1.94
HSH49YOR319W BMH1P29311 267 aaKnown RBP2.92□□□□□ -1.94
HSH49YOR319W MGM101P32787 269 aaKnown RBP2.92□□□□□ -1.94
HSH49YOR319W NTF2P33331 125 aaKnown RBP2.92□□□□□ -1.94
HSH49YOR319W YMR144WP40214 342 aaKnown RBP2.92□□□□□ -1.94
HSH49YOR319W RSM27P53305 110 aa2.92□□□□□ -1.94
HSH49YOR319W OSH6Q02201 448 aa2.92□□□□□ -1.94
HSH49YOR319W YMR114CQ04471 368 aaKnown RBP2.92□□□□□ -1.94
HSH49YOR319W YDL211CQ12121 372 aa2.92□□□□□ -1.94
HSH49YOR319W YPL150WQ12152 901 aa2.92□□□□□ -1.94
HSH49YOR319W JLP1Q12358 412 aa2.92□□□□□ -1.94
HSH49YOR319W CUP2P15315 225 aa2.91□□□□□ -1.94
HSH49YOR319W CPT1P17898 393 aa2.91□□□□□ -1.94
HSH49YOR319W PRX1P34227 261 aaKnown RBP2.91□□□□□ -1.94
HSH49YOR319W YJR149WP47177 404 aa2.91□□□□□ -1.94
HSH49YOR319W TRM9P49957 279 aa2.91□□□□□ -1.94
HSH49YOR319W MGA1P53050 456 aa2.91□□□□□ -1.94
HSH49YOR319W SIR4P11978 1358 aa2.9□□□□□ -1.94
HSH49YOR319W NUP157P40064 1391 aaKnown RBP2.9□□□□□ -1.94
HSH49YOR319W RPL28P02406 149 aaKnown RBP2.9□□□□□ -1.95
HSH49YOR319W SNA3P14359 133 aa2.9□□□□□ -1.95
HSH49YOR319W YAK1P14680 807 aa2.9□□□□□ -1.95
HSH49YOR319W PRE7P23724 241 aaKnown RBP2.9□□□□□ -1.95
HSH49YOR319W IDH1P28834 360 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
HSH49YOR319W TAF14P35189 244 aa2.9□□□□□ -1.95
HSH49YOR319W MID2P36027 376 aa2.9□□□□□ -1.95
HSH49YOR319W YBL081WP38180 368 aaKnown RBP2.9□□□□□ -1.95
HSH49YOR319W TRR2P38816 342 aa2.9□□□□□ -1.95
HSH49YOR319W YPL039WQ03080 316 aa2.9□□□□□ -1.95
HSH49YOR319W ECM11Q04110 302 aa2.9□□□□□ -1.95
HSH49YOR319W HEM25Q07534 307 aa2.9□□□□□ -1.95
HSH49YOR319W YPL264CQ08980 353 aa2.9□□□□□ -1.95
HSH49YOR319W YRA1Q12159 226 aaKnown RBP2.9□□□□□ -1.95
HSH49YOR319W YPS3Q12303 508 aa2.9□□□□□ -1.95
HSH49YOR319W SMT3Q12306 101 aaKnown RBP2.9□□□□□ -1.95
HSH49YOR319W YBL008W-AQ3E821 79 aa2.9□□□□□ -1.95
HSH49YOR319W PAN1P32521 1480 aa2.9□□□□□ -1.95
HSH49YOR319W YDR157WA0A023PZE8 133 aa2.89□□□□□ -1.95
HSH49YOR319W YEL009C-AA0A023PZF2 135 aa2.89□□□□□ -1.95
HSH49YOR319W SOD1P00445 154 aaKnown RBP2.89□□□□□ -1.95
HSH49YOR319W MATALPHA2P0CY08 210 aa2.89□□□□□ -1.95
HSH49YOR319W HMLALPHA2P0CY09 210 aa2.89□□□□□ -1.95
HSH49YOR319W MER1P16523 270 aa2.89□□□□□ -1.95
HSH49YOR319W ASF2P32448 525 aaPredicted RBP2.89□□□□□ -1.95
HSH49YOR319W TRM7P38238 310 aaKnown RBP2.89□□□□□ -1.95
HSH49YOR319W TEM1P38987 245 aa2.89□□□□□ -1.95
HSH49YOR319W YRB2P40517 327 aa2.89□□□□□ -1.95
HSH49YOR319W YJL028WP47062 111 aa2.89□□□□□ -1.95
HSH49YOR319W ADO1P47143 340 aaKnown RBP2.89□□□□□ -1.95
HSH49YOR319W NIF3P53081 288 aa2.89□□□□□ -1.95
HSH49YOR319W FLC3P53121 802 aa2.89□□□□□ -1.95
HSH49YOR319W YNL046WP53956 172 aa2.89□□□□□ -1.95
HSH49YOR319W YOR186WQ08560 144 aa2.89□□□□□ -1.95
HSH49YOR319W TPO4Q12256 659 aa2.89□□□□□ -1.95
HSH49YOR319W ISD11Q6Q560 94 aa2.89□□□□□ -1.95
HSH49YOR319W HTB1P02293 131 aaKnown RBP2.88□□□□□ -1.95
HSH49YOR319W HTB2P02294 131 aa2.88□□□□□ -1.95
HSH49YOR319W YOL163WP0CF20 169 aa2.88□□□□□ -1.95
HSH49YOR319W ERD2P18414 219 aa2.88□□□□□ -1.95
HSH49YOR319W CAB3P36076 571 aa2.88□□□□□ -1.95
HSH49YOR319W ECM13P38195 257 aa2.88□□□□□ -1.95
HSH49YOR319W SLX1P38324 304 aa2.88□□□□□ -1.95
HSH49YOR319W SSH1P38353 490 aaKnown RBP2.88□□□□□ -1.95
HSH49YOR319W IKI1P38874 309 aa2.88□□□□□ -1.95
HSH49YOR319W SUR2P38992 349 aa2.88□□□□□ -1.95
HSH49YOR319W NUP57P48837 541 aa2.88□□□□□ -1.95
HSH49YOR319W BRR6P53062 197 aa2.88□□□□□ -1.95
HSH49YOR319W YGL034CP53186 121 aa2.88□□□□□ -1.95
HSH49YOR319W FYV6P53913 173 aa2.88□□□□□ -1.95
HSH49YOR319W ABP140Q08641 628 aaKnown RBP2.88□□□□□ -1.95
HSH49YOR319W TIM22Q12328 207 aa2.88□□□□□ -1.95
HSH49YOR319W CBF1P17106 351 aa2.87□□□□□ -1.95
HSH49YOR319W PPH21P23594 369 aa2.87□□□□□ -1.95
HSH49YOR319W SFC1P33303 322 aa2.87□□□□□ -1.95
HSH49YOR319W ALG13P53178 202 aa2.87□□□□□ -1.95
HSH49YOR319W GET1P53192 235 aa2.87□□□□□ -1.95
HSH49YOR319W SNZ1Q03148 297 aa2.87□□□□□ -1.95
HSH49YOR319W EMI1Q04406 187 aa2.87□□□□□ -1.95
HSH49YOR319W PRR2Q12310 699 aa2.87□□□□□ -1.95
HSH49YOR319W IES3Q12345 250 aa2.87□□□□□ -1.95
HSH49YOR319W YBL112CQ3E7Y4 105 aa2.87□□□□□ -1.95
HSH49YOR319W RPL27AP0C2H6 136 aaKnown RBP2.86□□□□□ -1.95
HSH49YOR319W RPL27BP0C2H7 136 aaKnown RBP2.86□□□□□ -1.95
HSH49YOR319W ZWF1P11412 505 aaKnown RBP2.86□□□□□ -1.95
HSH49YOR319W URA6P15700 204 aa2.86□□□□□ -1.95
HSH49YOR319W RFA3P26755 122 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms