RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeastyeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NFI1YOR156C FZO1P38297 855 aa3.39□□□□□ -1.87
NFI1YOR156C BFR1P38934 470 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
NFI1YOR156C YGL088WP53151 121 aa3.39□□□□□ -1.87
NFI1YOR156C PPH21P23594 369 aa3.38□□□□□ -1.87
NFI1YOR156C DPB2P24482 689 aaPredicted RBP3.38□□□□□ -1.87
NFI1YOR156C SDH4P37298 181 aa3.38□□□□□ -1.87
NFI1YOR156C YJL144WP47009 104 aa3.38□□□□□ -1.87
NFI1YOR156C YDR114CQ04597 100 aa3.38□□□□□ -1.87
NFI1YOR156C SNU23Q12368 194 aaPredicted RBP3.38□□□□□ -1.87
NFI1YOR156C SPA2P23201 1466 aaKnown RBP3.38□□□□□ -1.87
NFI1YOR156C PIR5P46999 287 aa3.38□□□□□ -1.87
NFI1YOR156C RLP24Q07915 199 aaKnown RBP3.38□□□□□ -1.87
NFI1YOR156C KRE1P17260 313 aa3.37□□□□□ -1.87
NFI1YOR156C DRE2P36152 348 aa3.37□□□□□ -1.87
NFI1YOR156C RTR1P40084 226 aaPredicted RBP3.37□□□□□ -1.87
NFI1YOR156C NOP13P53883 403 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
NFI1YOR156C RSA4P25382 515 aaKnown RBP3.36□□□□□ -1.87
NFI1YOR156C YCR102CP25608 368 aa3.36□□□□□ -1.87
NFI1YOR156C SPO77Q06134 477 aa3.36□□□□□ -1.87
NFI1YOR156C SYC1Q08553 188 aaPredicted RBP3.36□□□□□ -1.87
NFI1YOR156C MIG1P27705 504 aa3.36□□□□□ -1.87
NFI1YOR156C SGE1P33335 543 aa3.36□□□□□ -1.87
NFI1YOR156C MAL32P38158 584 aa3.36□□□□□ -1.87
NFI1YOR156C YHB1P39676 399 aaKnown RBP3.36□□□□□ -1.87
NFI1YOR156C RPC17P47076 161 aa3.36□□□□□ -1.87
NFI1YOR156C MAL12P53341 584 aa3.36□□□□□ -1.87
NFI1YOR156C YDR124WQ04608 324 aa3.36□□□□□ -1.87
NFI1YOR156C YOR186WQ08560 144 aa3.36□□□□□ -1.87
NFI1YOR156C YOR268CQ08734 132 aa3.36□□□□□ -1.87
NFI1YOR156C EMP46Q12396 444 aa3.36□□□□□ -1.87
NFI1YOR156C RAD10P06838 210 aa3.35□□□□□ -1.87
NFI1YOR156C RRP40Q08285 240 aaKnown RBP3.35□□□□□ -1.87
NFI1YOR156C RUD3Q12234 484 aaKnown RBP3.35□□□□□ -1.87
NFI1YOR156C GEP5Q12393 293 aa3.35□□□□□ -1.87
NFI1YOR156C RNP1P32385 249 aa3.35□□□□□ -1.87
NFI1YOR156C SEI1Q06058 285 aa3.35□□□□□ -1.87
NFI1YOR156C PST1Q12355 444 aa3.35□□□□□ -1.87
NFI1YOR156C GCN20P43535 752 aaKnown RBP3.34□□□□□ -1.87
NFI1YOR156C RHO3Q00245 231 aaKnown RBP3.34□□□□□ -1.87
NFI1YOR156C HRT1Q08273 121 aa3.34□□□□□ -1.87
NFI1YOR156C OTU1P43558 301 aa3.34□□□□□ -1.88
NFI1YOR156C YMR114CQ04471 368 aaKnown RBP3.34□□□□□ -1.88
NFI1YOR156C SLD7Q08457 257 aa3.34□□□□□ -1.88
NFI1YOR156C RHO1P06780 209 aaKnown RBP3.33□□□□□ -1.88
NFI1YOR156C BMH2P34730 273 aaKnown RBP3.33□□□□□ -1.88
NFI1YOR156C VPS21P36017 210 aaKnown RBP3.33□□□□□ -1.88
NFI1YOR156C YHR127WP38833 243 aaKnown RBP3.33□□□□□ -1.88
NFI1YOR156C YNL046WP53956 172 aa3.33□□□□□ -1.88
NFI1YOR156C GOT1Q03554 138 aa3.33□□□□□ -1.88
NFI1YOR156C YPL229WQ99395 206 aa3.33□□□□□ -1.88
NFI1YOR156C SEC22P22214 214 aa3.32□□□□□ -1.88
NFI1YOR156C MRPL25P23369 157 aa3.32□□□□□ -1.88
NFI1YOR156C MRPL39P36533 70 aa3.32□□□□□ -1.88
NFI1YOR156C MSS2P40990 351 aa3.32□□□□□ -1.88
NFI1YOR156C SWI1P09547 1314 aa3.32□□□□□ -1.88
NFI1YOR156C YPR096CO13587 100 aa3.32□□□□□ -1.88
NFI1YOR156C SSH1P38353 490 aaKnown RBP3.32□□□□□ -1.88
NFI1YOR156C YLR126CQ12288 251 aa3.32□□□□□ -1.88
NFI1YOR156C SGA1P08019 549 aa3.31□□□□□ -1.88
NFI1YOR156C YER189WP40104 122 aa3.31□□□□□ -1.88
NFI1YOR156C RSM10Q03201 203 aa3.31□□□□□ -1.88
NFI1YOR156C ERD2P18414 219 aa3.31□□□□□ -1.88
NFI1YOR156C GON7P46984 123 aa3.31□□□□□ -1.88
NFI1YOR156C YJR149WP47177 404 aa3.31□□□□□ -1.88
NFI1YOR156C SYF2P53277 215 aaPredicted RBP3.31□□□□□ -1.88
NFI1YOR156C CAB4P53332 305 aa3.31□□□□□ -1.88
NFI1YOR156C DCR2Q05924 578 aa3.31□□□□□ -1.88
NFI1YOR156C YLR179CQ06252 201 aaKnown RBP3.31□□□□□ -1.88
NFI1YOR156C CLP1Q08685 445 aaPredicted RBP3.31□□□□□ -1.88
NFI1YOR156C SSN2P38931 1420 aa3.3□□□□□ -1.88
NFI1YOR156C DPM1P14020 267 aaKnown RBP3.3□□□□□ -1.88
NFI1YOR156C NTF2P33331 125 aaKnown RBP3.3□□□□□ -1.88
NFI1YOR156C YJR141WP47172 347 aaPredicted RBP3.3□□□□□ -1.88
NFI1YOR156C SSU72P53538 206 aaPredicted RBP3.3□□□□□ -1.88
NFI1YOR156C GRX3Q03835 250 aa3.3□□□□□ -1.88
NFI1YOR156C THP2O13539 261 aaKnown RBP3.29□□□□□ -1.88
NFI1YOR156C ARG80P07249 177 aa3.29□□□□□ -1.88
NFI1YOR156C SNA3P14359 133 aa3.29□□□□□ -1.88
NFI1YOR156C VMA6P32366 345 aaKnown RBP3.29□□□□□ -1.88
NFI1YOR156C CUE1P38428 203 aa3.29□□□□□ -1.88
NFI1YOR156C YER188WP40103 239 aa3.29□□□□□ -1.88
NFI1YOR156C MSA1Q08471 629 aa3.29□□□□□ -1.88
NFI1YOR156C YLR462WO13556 202 aa3.28□□□□□ -1.88
NFI1YOR156C PPA2P28239 310 aa3.28□□□□□ -1.88
NFI1YOR156C URA8P38627 578 aaPredicted RBP3.28□□□□□ -1.88
NFI1YOR156C RTC3P38804 111 aaPredicted RBP3.28□□□□□ -1.88
NFI1YOR156C YEL075CP39972 122 aa3.28□□□□□ -1.88
NFI1YOR156C RPL24BP24000 155 aaKnown RBP3.28□□□□□ -1.88
NFI1YOR156C TCD1P38756 429 aa3.28□□□□□ -1.88
NFI1YOR156C MCM22P47167 239 aa3.27□□□□□ -1.89
NFI1YOR156C TRM9P49957 279 aa3.27□□□□□ -1.89
NFI1YOR156C YGL159WP53110 370 aa3.27□□□□□ -1.89
NFI1YOR156C GRH1Q04410 372 aaKnown RBP3.27□□□□□ -1.89
NFI1YOR156C YPR172WQ06608 200 aa3.27□□□□□ -1.89
NFI1YOR156C YLR030WQ07967 263 aa3.27□□□□□ -1.89
NFI1YOR156C CDC10P25342 322 aaKnown RBP3.27□□□□□ -1.89
NFI1YOR156C YKR032WP36127 104 aa3.27□□□□□ -1.89
NFI1YOR156C MSA2P36157 363 aa3.27□□□□□ -1.89
NFI1YOR156C MIC12P38341 106 aa3.27□□□□□ -1.89
NFI1YOR156C FAR8Q05040 523 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms