RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C SKO1Q02100 647 aa6.65□□□□□ -1.35
RUP1YOR138C YMR279CQ03263 540 aa6.65□□□□□ -1.35
RUP1YOR138C SYM1Q06563 197 aa6.65□□□□□ -1.35
RUP1YOR138C BSC6Q08280 497 aa6.65□□□□□ -1.35
RUP1YOR138C GAL1P04385 528 aa6.64□□□□□ -1.35
RUP1YOR138C YSF3P0C074 85 aaPredicted RBP6.64□□□□□ -1.35
RUP1YOR138C ERG3P32353 365 aa6.64□□□□□ -1.35
RUP1YOR138C OM14P38325 134 aa6.64□□□□□ -1.35
RUP1YOR138C LNP1P38878 278 aa6.64□□□□□ -1.35
RUP1YOR138C POG1P40473 351 aa6.64□□□□□ -1.35
RUP1YOR138C BUD8P41698 603 aa6.64□□□□□ -1.35
RUP1YOR138C CIS3P47001 227 aa6.64□□□□□ -1.35
RUP1YOR138C MPA43P53583 542 aaPredicted RBP6.64□□□□□ -1.35
RUP1YOR138C NRG1Q03125 231 aa6.64□□□□□ -1.35
RUP1YOR138C YPR145C-AQ2V2P0 78 aa6.64□□□□□ -1.35
RUP1YOR138C YML003WP0CF16 290 aa6.64□□□□□ -1.35
RUP1YOR138C OLE1P21147 510 aaKnown RBP6.64□□□□□ -1.35
RUP1YOR138C APA2P22108 325 aa6.64□□□□□ -1.35
RUP1YOR138C COS9P36034 407 aa6.64□□□□□ -1.35
RUP1YOR138C ATG8P38182 117 aaRIP-Chip data6.64□□□□□ -1.35not detected
RUP1YOR138C YPC1P38298 316 aa6.64□□□□□ -1.35
RUP1YOR138C ERJ5P43613 295 aaPredicted RBP6.64□□□□□ -1.35
RUP1YOR138C YJR056CP47115 236 aa6.64□□□□□ -1.35
RUP1YOR138C YGR066CP53242 292 aa6.64□□□□□ -1.35
RUP1YOR138C ERG13P54839 491 aaKnown RBP6.64□□□□□ -1.35
RUP1YOR138C MRPL1Q04599 285 aa6.64□□□□□ -1.35
RUP1YOR138C RTT103Q05543 409 aa6.64□□□□□ -1.35
RUP1YOR138C NNT1Q05874 261 aa6.64□□□□□ -1.35
RUP1YOR138C MCP1Q12106 302 aa6.64□□□□□ -1.35
RUP1YOR138C PRS5Q12265 496 aaKnown RBP6.64□□□□□ -1.35
RUP1YOR138C DGK1Q12382 290 aa6.64□□□□□ -1.35
RUP1YOR138C SET6Q12529 373 aa6.64□□□□□ -1.35
RUP1YOR138C ARO4P32449 370 aaKnown RBP6.63□□□□□ -1.35
RUP1YOR138C RPS27AP35997 82 aaKnown RBP6.63□□□□□ -1.35
RUP1YOR138C SHM2P37291 469 aaKnown RBP6.63□□□□□ -1.35
RUP1YOR138C RIB5P38145 238 aa6.63□□□□□ -1.35
RUP1YOR138C RPS27BP38711 82 aa6.63□□□□□ -1.35
RUP1YOR138C YJL193WP39542 402 aa6.63□□□□□ -1.35
RUP1YOR138C PHB1P40961 287 aa6.63□□□□□ -1.35
RUP1YOR138C ADO1P47143 340 aaKnown RBP6.63□□□□□ -1.35
RUP1YOR138C UFD1P53044 361 aa6.63□□□□□ -1.35
RUP1YOR138C ALG9P53868 555 aaKnown RBP6.63□□□□□ -1.35
RUP1YOR138C SMX3P54999 86 aaPredicted RBP6.63□□□□□ -1.35
RUP1YOR138C YCL001W-AP87012 153 aa6.63□□□□□ -1.35
RUP1YOR138C CRR1Q05790 422 aa6.63□□□□□ -1.35
RUP1YOR138C SDO1Q07953 250 aaKnown RBP6.63□□□□□ -1.35
RUP1YOR138C SRL2Q12020 392 aa6.63□□□□□ -1.35
RUP1YOR138C YOR343CQ12484 108 aa6.63□□□□□ -1.35
RUP1YOR138C CDS1P38221 457 aa6.62□□□□□ -1.35
RUP1YOR138C PFS1P38872 237 aa6.62□□□□□ -1.35
RUP1YOR138C SEH1P53011 349 aaKnown RBP6.62□□□□□ -1.35
RUP1YOR138C RMD9P53140 646 aaKnown RBP6.62□□□□□ -1.35
RUP1YOR138C MRPL22P53881 309 aa6.62□□□□□ -1.35
RUP1YOR138C AAH1P53909 347 aa6.62□□□□□ -1.35
RUP1YOR138C AGE1Q04412 482 aa6.62□□□□□ -1.35
RUP1YOR138C MCT1Q12283 360 aa6.62□□□□□ -1.35
RUP1YOR138C IMG2P25642 146 aaPredicted RBP6.62□□□□□ -1.35
RUP1YOR138C HOG1P32485 435 aa6.62□□□□□ -1.35
RUP1YOR138C FRM2P37261 193 aa6.62□□□□□ -1.35
RUP1YOR138C GPI16P38875 610 aa6.62□□□□□ -1.35
RUP1YOR138C BAT1P38891 393 aaKnown RBP6.62□□□□□ -1.35
RUP1YOR138C SLZ1P40167 298 aa6.62□□□□□ -1.35
RUP1YOR138C VMA21P41806 77 aa6.62□□□□□ -1.35
RUP1YOR138C OYE3P41816 400 aaPredicted RBP6.62□□□□□ -1.35
RUP1YOR138C YJR115WP47152 169 aa6.62□□□□□ -1.35
RUP1YOR138C SOL1P50278 321 aa6.62□□□□□ -1.35
RUP1YOR138C RNH201P53942 307 aa6.62□□□□□ -1.35
RUP1YOR138C THI73Q07904 523 aa6.62□□□□□ -1.35
RUP1YOR138C VAM3Q12241 283 aa6.62□□□□□ -1.35
RUP1YOR138C MSW1P04803 379 aa6.61□□□□□ -1.35
RUP1YOR138C YFR010W-AP0C5N0 62 aa6.61□□□□□ -1.35
RUP1YOR138C ARF1P11076 181 aaKnown RBP6.61□□□□□ -1.35
RUP1YOR138C ATP3P38077 311 aaKnown RBP6.61□□□□□ -1.35
RUP1YOR138C ARC40P38328 384 aaKnown RBP6.61□□□□□ -1.35
RUP1YOR138C LSM8P47093 109 aaKnown RBP6.61□□□□□ -1.35
RUP1YOR138C APJ1P53940 528 aa6.61□□□□□ -1.35
RUP1YOR138C SAM50P53969 484 aa6.61□□□□□ -1.35
RUP1YOR138C HPF1Q05164 967 aa6.61□□□□□ -1.35
RUP1YOR138C ERP1Q05359 219 aaKnown RBP6.61□□□□□ -1.35
RUP1YOR138C PAL1Q05518 499 aaKnown RBP6.61□□□□□ -1.35
RUP1YOR138C PRP46Q12417 451 aaPredicted RBP6.61□□□□□ -1.35
RUP1YOR138C FAB1P34756 2278 aa6.61□□□□□ -1.35
RUP1YOR138C RPB3P16370 318 aaKnown RBP6.6□□□□□ -1.35
RUP1YOR138C RFA1P22336 621 aaKnown RBP6.6□□□□□ -1.35
RUP1YOR138C TRR1P29509 319 aaKnown RBP6.6□□□□□ -1.35
RUP1YOR138C FIG1P38224 298 aa6.6□□□□□ -1.35
RUP1YOR138C SWS2P53937 143 aa6.6□□□□□ -1.35
RUP1YOR138C YLR460CP54007 376 aa6.6□□□□□ -1.35
RUP1YOR138C SRP1Q02821 542 aaKnown RBP6.6□□□□□ -1.35
RUP1YOR138C FIT1Q04433 528 aa6.6□□□□□ -1.35
RUP1YOR138C IRC19Q07843 230 aa6.6□□□□□ -1.35
RUP1YOR138C HMS1Q12398 434 aa6.6□□□□□ -1.35
RUP1YOR138C PET494P07390 489 aaPredicted RBP6.6□□□□□ -1.35
RUP1YOR138C SRX1P36077 127 aa6.6□□□□□ -1.35
RUP1YOR138C SHG1P38337 142 aa6.6□□□□□ -1.35
RUP1YOR138C YEA6P39953 335 aa6.6□□□□□ -1.35
RUP1YOR138C AIR1P40507 360 aaKnown RBP6.6□□□□□ -1.35
RUP1YOR138C SHR5P41912 237 aa6.6□□□□□ -1.35
RUP1YOR138C SPG5P42933 373 aa6.6□□□□□ -1.35
RUP1YOR138C HOL1P53389 586 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms