RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	CDC39	P25655	2108 aa	Known RBP	12.52	□□□□□ -0.41
SHR5	YOL110W	CHO1	P08456	276 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	CDC34	P14682	295 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	SEC66	P33754	206 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	MCH2	P36032	473 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	TCM62	P38228	572 aa	Known RBP	12.51	□□□□□ -0.41
SHR5	YOL110W	YHR122W	P38829	231 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	FLX1	P40464	311 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	YFL051C	P43552	160 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	MSE1	P48525	536 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	YGR042W	P53227	271 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	API2	Q04413	109 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	PHO92	Q06390	306 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	RFU1	Q08003	200 aa		12.51	□□□□□ -0.41
SHR5	YOL110W	HTZ1	Q12692	134 aa	Known RBP	12.51	□□□□□ -0.41
SHR5	YOL110W	PET54	P10834	293 aa		12.5	□□□□□ -0.41
SHR5	YOL110W	RIB7	P33312	244 aa		12.5	□□□□□ -0.41
SHR5	YOL110W	ARC40	P38328	384 aa	Known RBP	12.5	□□□□□ -0.41
SHR5	YOL110W	YIP5	P53108	310 aa		12.5	□□□□□ -0.41
SHR5	YOL110W	YPL077C	Q02831	240 aa		12.5	□□□□□ -0.41
SHR5	YOL110W	HNT1	Q04344	158 aa	Known RBP	12.5	□□□□□ -0.41
SHR5	YOL110W	MRX9	Q07349	420 aa	Known RBP	12.5	□□□□□ -0.41
SHR5	YOL110W	NUM1	Q00402	2748 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	MET3	P08536	511 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	MTC7	P32633	139 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	YBL010C	P32788	280 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	ARO9	P38840	513 aa	Predicted RBP	12.49	□□□□□ -0.41
SHR5	YOL110W	YND1	P40009	630 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	YIL060W	P40519	144 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	YKE4	P40544	346 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	AIM25	P47140	327 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	UBC13	P52490	153 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	RRS1	Q08746	203 aa	Known RBP	12.49	□□□□□ -0.41
SHR5	YOL110W	WTM2	Q12206	467 aa		12.49	□□□□□ -0.41
SHR5	YOL110W	SSA3	P09435	649 aa	Known RBP	12.48	□□□□□ -0.41
SHR5	YOL110W	ARO4	P32449	370 aa	Known RBP	12.48	□□□□□ -0.41
SHR5	YOL110W	YBR220C	P38318	560 aa		12.48	□□□□□ -0.41
SHR5	YOL110W	YMR144W	P40214	342 aa	Known RBP	12.48	□□□□□ -0.41
SHR5	YOL110W	NSA1	P53136	463 aa	Predicted RBP	12.48	□□□□□ -0.41
SHR5	YOL110W	YNL092W	P53934	400 aa		12.48	□□□□□ -0.41
SHR5	YOL110W	UTP15	Q04305	513 aa	Known RBP	12.48	□□□□□ -0.41
SHR5	YOL110W	SPR28	Q04921	423 aa		12.48	□□□□□ -0.41
SHR5	YOL110W	MRL1	Q06815	381 aa		12.48	□□□□□ -0.41
SHR5	YOL110W	YLR031W	Q07978	186 aa		12.48	□□□□□ -0.41
SHR5	YOL110W	URA6	P15700	204 aa		12.47	□□□□□ -0.41
SHR5	YOL110W	MSS1	P32559	526 aa	Predicted RBP	12.47	□□□□□ -0.41
SHR5	YOL110W	GLC7	P32598	312 aa	Known RBP	12.47	□□□□□ -0.41
SHR5	YOL110W	REC114	P32841	428 aa		12.47	□□□□□ -0.41
SHR5	YOL110W	OST1	P41543	476 aa	Known RBP	12.47	□□□□□ -0.41
SHR5	YOL110W	GIM3	P53900	129 aa		12.47	□□□□□ -0.41
SHR5	YOL110W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	12.47	□□□□□ -0.41	not detected
SHR5	YOL110W	YPR196W	Q06595	470 aa		12.47	□□□□□ -0.41
SHR5	YOL110W	MSI1	P13712	422 aa		12.46	□□□□□ -0.41
SHR5	YOL110W	RFA3	P26755	122 aa	Known RBP	12.46	□□□□□ -0.41
SHR5	YOL110W	RNP1	P32385	249 aa		12.46	□□□□□ -0.41
SHR5	YOL110W	OTU1	P43558	301 aa		12.46	□□□□□ -0.41
SHR5	YOL110W	TY1A-MR1	Q04215	440 aa		12.46	□□□□□ -0.41
SHR5	YOL110W	YPR098C	Q06089	161 aa		12.46	□□□□□ -0.41
SHR5	YOL110W	NCE102	Q12207	173 aa	RIP-Chip data	12.46	□□□□□ -0.41	not detected
SHR5	YOL110W	SPS2	P08459	502 aa		12.45	□□□□□ -0.42
SHR5	YOL110W	RPL43A	P0CX25	92 aa	Known RBP	12.45	□□□□□ -0.42
SHR5	YOL110W	RPL43B	P0CX26	92 aa		12.45	□□□□□ -0.42
SHR5	YOL110W	SAG1	P20840	650 aa		12.45	□□□□□ -0.42
SHR5	YOL110W	YBR242W	P38331	238 aa		12.45	□□□□□ -0.42
SHR5	YOL110W	RSC58	Q07979	502 aa		12.45	□□□□□ -0.42
SHR5	YOL110W	ERP4	Q12450	207 aa		12.45	□□□□□ -0.42
SHR5	YOL110W	CDC28	P00546	298 aa	Known RBP	12.44	□□□□□ -0.42
SHR5	YOL110W	SPS4	P09937	338 aa		12.44	□□□□□ -0.42
SHR5	YOL110W	CDC23	P16522	626 aa		12.44	□□□□□ -0.42
SHR5	YOL110W	VMA5	P31412	392 aa	Known RBP	12.44	□□□□□ -0.42
SHR5	YOL110W	YKL063C	P35725	167 aa		12.44	□□□□□ -0.42
SHR5	YOL110W	YGP1	P38616	354 aa	Known RBP	12.44	□□□□□ -0.42
SHR5	YOL110W	PRS3	P38689	320 aa	Known RBP	12.44	□□□□□ -0.42
SHR5	YOL110W	YIL029C	P40538	142 aa		12.44	□□□□□ -0.42
SHR5	YOL110W	GNA1	P43577	159 aa	Predicted RBP	12.44	□□□□□ -0.42
SHR5	YOL110W	TY1A-DR2	Q03964	440 aa	Known RBP	12.44	□□□□□ -0.42
SHR5	YOL110W	DLT1	Q04216	342 aa		12.44	□□□□□ -0.42
SHR5	YOL110W	HUT1	Q12520	339 aa		12.44	□□□□□ -0.42
SHR5	YOL110W	TDH2	P00358	332 aa	Known RBP	12.43	□□□□□ -0.42
SHR5	YOL110W	RPL3	P14126	387 aa	Known RBP	12.43	□□□□□ -0.42
SHR5	YOL110W	FAT1	P38225	669 aa		12.43	□□□□□ -0.42
SHR5	YOL110W	TYW3	P53177	273 aa		12.43	□□□□□ -0.42
SHR5	YOL110W	CRZ1	P53968	678 aa		12.43	□□□□□ -0.42
SHR5	YOL110W	YDC1	Q02896	317 aa		12.43	□□□□□ -0.42
SHR5	YOL110W	RPS23A	P0CX29	145 aa	Known RBP	12.42	□□□□□ -0.42
SHR5	YOL110W	RPS23B	P0CX30	145 aa		12.42	□□□□□ -0.42
SHR5	YOL110W	MRPL3	P36516	390 aa		12.42	□□□□□ -0.42
SHR5	YOL110W	MRPL36	P36531	177 aa		12.42	□□□□□ -0.42
SHR5	YOL110W	RPS0B	P46654	252 aa	Known RBP	12.42	□□□□□ -0.42
SHR5	YOL110W	SSN8	P47821	323 aa		12.42	□□□□□ -0.42
SHR5	YOL110W	SKP1	P52286	194 aa		12.42	□□□□□ -0.42
SHR5	YOL110W	FSH3	Q99369	266 aa		12.42	□□□□□ -0.42
SHR5	YOL110W	VAM7	P32912	316 aa		12.41	□□□□□ -0.42
SHR5	YOL110W	YER079W	P40052	210 aa	Known RBP	12.41	□□□□□ -0.42
SHR5	YOL110W	UFD1	P53044	361 aa		12.41	□□□□□ -0.42
SHR5	YOL110W	RPL6B	P05739	176 aa	Known RBP	12.4	□□□□□ -0.42
SHR5	YOL110W	RNA14	P25298	677 aa	Known RBP	12.4	□□□□□ -0.42
SHR5	YOL110W	YCP4	P25349	247 aa	Known RBP	12.4	□□□□□ -0.42
SHR5	YOL110W	NAT2	P37293	288 aa		12.4	□□□□□ -0.42
SHR5	YOL110W	MID1	P41821	548 aa		12.4	□□□□□ -0.42

Retrieved 100 of 5,963 RNA–protein pairs in 339 ms