RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W FMP41P53889 259 aaKnown RBP3.22□□□□□ -1.89
VPS27YNR006W YLR281CQ05863 155 aa3.22□□□□□ -1.89
VPS27YNR006W MRX4Q12467 430 aa3.22□□□□□ -1.89
VPS27YNR006W TRR1P29509 319 aaKnown RBP3.21□□□□□ -1.9
VPS27YNR006W YFL067WP43537 175 aa3.21□□□□□ -1.9
VPS27YNR006W JAC1P53193 184 aa3.21□□□□□ -1.9
VPS27YNR006W CRH1P53301 507 aa3.21□□□□□ -1.9
VPS27YNR006W NRK1P53915 240 aa3.21□□□□□ -1.9
VPS27YNR006W YML096WQ04489 525 aa3.21□□□□□ -1.9
VPS27YNR006W YDR018CQ12185 396 aa3.21□□□□□ -1.9
VPS27YNR006W HMS1Q12398 434 aa3.21□□□□□ -1.9
VPS27YNR006W POL1P13382 1468 aa3.21□□□□□ -1.9
VPS27YNR006W MMS22Q06164 1454 aa3.21□□□□□ -1.9
VPS27YNR006W YPK9Q12697 1472 aa3.21□□□□□ -1.9
VPS27YNR006W RKR1Q04781 1562 aa3.21□□□□□ -1.9
VPS27YNR006W TY2B-LR1P0C2J3 1770 aa3.21□□□□□ -1.9
VPS27YNR006W TY2B-FP0CX63 1770 aa3.21□□□□□ -1.9
VPS27YNR006W TY2B-GR2P0CX64 1770 aa3.21□□□□□ -1.9
VPS27YNR006W TY2B-CP25384 1770 aa3.21□□□□□ -1.9
VPS27YNR006W TY2B-DR2Q03494 1770 aa3.21□□□□□ -1.9
VPS27YNR006W TY1B-DR1Q03855 1755 aa3.21□□□□□ -1.9
VPS27YNR006W TY2B-DR3Q07791 1770 aaKnown RBP3.21□□□□□ -1.9
VPS27YNR006W TY2B-OR1Q12113 1770 aa3.21□□□□□ -1.9
VPS27YNR006W TY2B-DR1Q12472 1770 aa3.21□□□□□ -1.9
VPS27YNR006W TY2B-OR2Q12501 1770 aa3.21□□□□□ -1.9
VPS27YNR006W SCC2Q04002 1493 aa3.2□□□□□ -1.9
VPS27YNR006W HHF1P02309 103 aaKnown RBP3.2□□□□□ -1.9
VPS27YNR006W CDC50P25656 391 aa3.2□□□□□ -1.9
VPS27YNR006W ECM13P38195 257 aa3.2□□□□□ -1.9
VPS27YNR006W SHE1P38200 338 aa3.2□□□□□ -1.9
VPS27YNR006W SEN34P39707 275 aa3.2□□□□□ -1.9
VPS27YNR006W YGL039WP53183 348 aaKnown RBP3.2□□□□□ -1.9
VPS27YNR006W YGR015CP53208 328 aa3.2□□□□□ -1.9
VPS27YNR006W YDC1Q02896 317 aa3.2□□□□□ -1.9
VPS27YNR006W YMR279CQ03263 540 aa3.2□□□□□ -1.9
VPS27YNR006W AGC1Q12482 902 aa3.2□□□□□ -1.9
VPS27YNR006W YER078W-AQ3E7A2 54 aa3.2□□□□□ -1.9
VPS27YNR006W YCL021W-AQ96VH3 125 aa3.2□□□□□ -1.9
VPS27YNR006W TY1B-DR3Q99231 1755 aa3.2□□□□□ -1.9
VPS27YNR006W MRPL28P36527 147 aa3.2□□□□□ -1.9
VPS27YNR006W YNL046WP53956 172 aa3.2□□□□□ -1.9
VPS27YNR006W CRZ1P53968 678 aa3.2□□□□□ -1.9
VPS27YNR006W YLR177WQ06251 628 aa3.2□□□□□ -1.9
VPS27YNR006W YPR147CQ06522 304 aaKnown RBP3.2□□□□□ -1.9
VPS27YNR006W TIR4Q12218 487 aaPredicted RBP3.2□□□□□ -1.9
VPS27YNR006W NAG1Q8TGN9 163 aa3.2□□□□□ -1.9
VPS27YNR006W CDC28P00546 298 aaKnown RBP3.19□□□□□ -1.9
VPS27YNR006W ZWF1P11412 505 aaKnown RBP3.19□□□□□ -1.9
VPS27YNR006W ERD2P18414 219 aa3.19□□□□□ -1.9
VPS27YNR006W OAC1P32332 324 aa3.19□□□□□ -1.9
VPS27YNR006W YPT52P36018 234 aaKnown RBP3.19□□□□□ -1.9
VPS27YNR006W DRE2P36152 348 aa3.19□□□□□ -1.9
VPS27YNR006W YER186CP40101 306 aa3.19□□□□□ -1.9
VPS27YNR006W YNL208WP40159 199 aaKnown RBP3.19□□□□□ -1.9
VPS27YNR006W YJL016WP47072 561 aa3.19□□□□□ -1.9
VPS27YNR006W MIG2P53035 382 aa3.19□□□□□ -1.9
VPS27YNR006W YGL034CP53186 121 aa3.19□□□□□ -1.9
VPS27YNR006W COG7P53195 279 aa3.19□□□□□ -1.9
VPS27YNR006W YPL113CQ02961 396 aa3.19□□□□□ -1.9
VPS27YNR006W GRX8Q05926 109 aa3.19□□□□□ -1.9
VPS27YNR006W DXO1Q06349 442 aa3.19□□□□□ -1.9
VPS27YNR006W NOC4Q06512 552 aaPredicted RBP3.19□□□□□ -1.9
VPS27YNR006W RRP40Q08285 240 aaKnown RBP3.19□□□□□ -1.9
VPS27YNR006W YMR316C-AI2HB70 103 aa3.18□□□□□ -1.9
VPS27YNR006W COX5AP00424 153 aa3.18□□□□□ -1.9
VPS27YNR006W YOX1P34161 385 aa3.18□□□□□ -1.9
VPS27YNR006W CAF4P36130 643 aa3.18□□□□□ -1.9
VPS27YNR006W YKR041WP36134 250 aa3.18□□□□□ -1.9
VPS27YNR006W LSM1P47017 172 aaKnown RBP3.18□□□□□ -1.9
VPS27YNR006W MRH4P53166 561 aa3.18□□□□□ -1.9
VPS27YNR006W ARO80Q04052 950 aa3.18□□□□□ -1.9
VPS27YNR006W PEX12Q04370 399 aa3.18□□□□□ -1.9
VPS27YNR006W MSA1Q08471 629 aa3.18□□□□□ -1.9
VPS27YNR006W SRL1Q08673 210 aa3.18□□□□□ -1.9
VPS27YNR006W RAX2Q12465 1220 aa3.18□□□□□ -1.9
VPS27YNR006W UFD4P33202 1483 aa3.18□□□□□ -1.9
VPS27YNR006W TY2B-BQ12491 1770 aa3.18□□□□□ -1.9
VPS27YNR006W YHR139C-AO13536 103 aa3.18□□□□□ -1.9
VPS27YNR006W COS2P0CX12 379 aa3.18□□□□□ -1.9
VPS27YNR006W COS3P0CX13 379 aa3.18□□□□□ -1.9
VPS27YNR006W CAM1P29547 415 aaKnown RBP3.18□□□□□ -1.9
VPS27YNR006W YMR144WP40214 342 aaKnown RBP3.18□□□□□ -1.9
VPS27YNR006W COS4P43542 379 aa3.18□□□□□ -1.9
VPS27YNR006W YJR056CP47115 236 aa3.18□□□□□ -1.9
VPS27YNR006W GTR2P53290 341 aa3.18□□□□□ -1.9
VPS27YNR006W PET191Q02772 108 aa3.18□□□□□ -1.9
VPS27YNR006W YOR186WQ08560 144 aa3.18□□□□□ -1.9
VPS27YNR006W FDH1Q08911 376 aa3.18□□□□□ -1.9
VPS27YNR006W YPL278CQ08990 100 aa3.18□□□□□ -1.9
VPS27YNR006W ERV2Q12284 196 aa3.18□□□□□ -1.9
VPS27YNR006W HRT3Q12347 344 aa3.18□□□□□ -1.9
VPS27YNR006W IZH2Q12442 317 aa3.18□□□□□ -1.9
VPS27YNR006W YAL063C-AQ3E791 96 aa3.18□□□□□ -1.9
VPS27YNR006W GCN3P14741 305 aa3.17□□□□□ -1.9
VPS27YNR006W GRX2P17695 143 aaKnown RBP3.17□□□□□ -1.9
VPS27YNR006W POP8P38208 133 aa3.17□□□□□ -1.9
VPS27YNR006W ECM33P38248 429 aaKnown RBP3.17□□□□□ -1.9
VPS27YNR006W DER1P38307 211 aa3.17□□□□□ -1.9
VPS27YNR006W PEX17P40155 199 aa3.17□□□□□ -1.9
VPS27YNR006W BIR1P47134 954 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms