RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA49	YNL248C	YPR147C	Q06522	304 aa	Known RBP	4.64	□□□□□ -1.67
RPA49	YNL248C	HEM25	Q07534	307 aa		4.64	□□□□□ -1.67
RPA49	YNL248C	MIM1	Q08176	113 aa		4.64	□□□□□ -1.67
RPA49	YNL248C	RDL2	Q08742	149 aa	Known RBP	4.64	□□□□□ -1.67
RPA49	YNL248C	YOR385W	Q08909	290 aa		4.64	□□□□□ -1.67
RPA49	YNL248C	SRL2	Q12020	392 aa		4.64	□□□□□ -1.67
RPA49	YNL248C	AEP3	Q12089	606 aa		4.64	□□□□□ -1.67
RPA49	YNL248C	YRM1	Q12340	786 aa		4.64	□□□□□ -1.67
RPA49	YNL248C	PAR32	Q12515	295 aa	Known RBP	4.64	□□□□□ -1.67
RPA49	YNL248C	YMR084W	A2P2R3	262 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	CHO1	P08456	276 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	SSA3	P09435	649 aa	Known RBP	4.63	□□□□□ -1.67
RPA49	YNL248C	EHD3	P28817	500 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	MKK2	P32491	506 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	PPZ2	P33329	710 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	FRM2	P37261	193 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	UMP1	P38293	148 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	COS8	P38723	381 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
RPA49	YNL248C	SHO1	P40073	367 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	SLZ1	P40167	298 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	ERJ5	P43613	295 aa	Predicted RBP	4.63	□□□□□ -1.67
RPA49	YNL248C	TAD2	P47058	250 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	ASK10	P48361	1146 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	HSV2	P50079	448 aa	Predicted RBP	4.63	□□□□□ -1.67
RPA49	YNL248C	TYW3	P53177	273 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	YGR126W	P53274	230 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	AAH1	P53909	347 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
RPA49	YNL248C	YML018C	Q03730	393 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	YLR456W	Q06199	204 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	ANT1	Q06497	328 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	NOC4	Q06512	552 aa	Predicted RBP	4.63	□□□□□ -1.67
RPA49	YNL248C	YRA1	Q12159	226 aa	Known RBP	4.63	□□□□□ -1.67
RPA49	YNL248C	ATP14	Q12349	124 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	HMS1	Q12398	434 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	WHI5	Q12416	295 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	ERP4	Q12450	207 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	RRI1	Q12468	440 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	YJR112W-A	Q3E743	109 aa		4.63	□□□□□ -1.67
RPA49	YNL248C	NAM2	P11325	894 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	FUS3	P16892	353 aa	Known RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	SPO7	P18410	259 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	TIP1	P27654	210 aa	Predicted RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	CAM1	P29547	415 aa	Known RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	VMA5	P31412	392 aa	Known RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	MCM10	P32354	571 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	ECM25	P32525	599 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	PDC2	P32896	925 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	SRY1	P36007	326 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	MRPL27	P36526	146 aa	Predicted RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	APD1	P38281	316 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	LSM12	P38828	187 aa	Known RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	YER010C	P40011	234 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	CUP9	P41817	306 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	YJL016W	P47072	561 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	YJR111C	P47148	283 aa	Known RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	OKP1	P53298	406 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	BSC5	P53755	489 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	RNH201	P53942	307 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	YPL039W	Q03080	316 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	DIG2	Q03373	323 aa	Known RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	YDR248C	Q03786	193 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	YDR102C	Q03864	110 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	CAB5	Q03941	241 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	FCF2	Q12035	217 aa	Predicted RBP	4.62	□□□□□ -1.67
RPA49	YNL248C	YLR108C	Q12259	485 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	EAF3	Q12432	401 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	PET20	Q99373	253 aa		4.62	□□□□□ -1.67
RPA49	YNL248C	SCEI	P03882	235 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	PUT1	P09368	476 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	YHR214C-D	P0CX93	97 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	HNM1	P19807	563 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	OLE1	P21147	510 aa	Known RBP	4.61	□□□□□ -1.67
RPA49	YNL248C	ERG3	P32353	365 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	VMA8	P32610	256 aa	Known RBP	4.61	□□□□□ -1.67
RPA49	YNL248C	COS9	P36034	407 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	POP8	P38208	133 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	AIM3	P38266	947 aa	Known RBP	4.61	□□□□□ -1.67
RPA49	YNL248C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
RPA49	YNL248C	YIR035C	P40579	254 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	REE1	P40893	198 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	HAM1	P47119	197 aa	Known RBP	4.61	□□□□□ -1.67
RPA49	YNL248C	HOL1	P53389	586 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	ALG9	P53868	555 aa	Known RBP	4.61	□□□□□ -1.67
RPA49	YNL248C	ERV25	P54837	211 aa	Known RBP	4.61	□□□□□ -1.67
RPA49	YNL248C	CGI121	Q03705	181 aa	Known RBP	4.61	□□□□□ -1.67
RPA49	YNL248C	SPR28	Q04921	423 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	SWM1	Q12379	170 aa		4.61	□□□□□ -1.67
RPA49	YNL248C	BEM2	P39960	2167 aa	Known RBP	4.61	□□□□□ -1.67
RPA49	YNL248C	REP2	P03872	296 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	PDX1	P16451	410 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	CPR4	P25334	318 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	RFA3	P26755	122 aa	Known RBP	4.6	□□□□□ -1.67
RPA49	YNL248C	SRB6	P32570	121 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	FMT1	P32785	401 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	GCV3	P39726	170 aa	Predicted RBP	4.6	□□□□□ -1.67
RPA49	YNL248C	BUD8	P41698	603 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	GLR1	P41921	483 aa	Known RBP	4.6	□□□□□ -1.67
RPA49	YNL248C	YHC3	P47040	408 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms