RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	TOM40	P23644	387 aa	Known RBP	0.94	□□□□□ -2.26
UBC7	YMR022W	RNP1	P32385	249 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	SMI1	P32566	505 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	DOA4	P32571	926 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	CSG2	P35206	410 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	YKL162C	P36052	402 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	TEM1	P38987	245 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	PEP8	P40335	379 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	SHQ1	P40486	507 aa	Predicted RBP	0.94	□□□□□ -2.26
UBC7	YMR022W	KEL2	P50090	882 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	INM2	Q05533	292 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	YLR297W	Q05899	129 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	ASR1	Q06834	288 aa		0.94	□□□□□ -2.26
UBC7	YMR022W	URA2	P07259	2214 aa	Known RBP	0.93	□□□□□ -2.26
UBC7	YMR022W	BRR2	P32639	2163 aa	Known RBP	0.93	□□□□□ -2.26
UBC7	YMR022W	RPL5	P26321	297 aa	Known RBP	0.93	□□□□□ -2.26
UBC7	YMR022W	SPT4	P32914	102 aa	Predicted RBP	0.93	□□□□□ -2.26
UBC7	YMR022W	RPC37	P36121	282 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	YHB1	P39676	399 aa	Known RBP	0.93	□□□□□ -2.26
UBC7	YMR022W	VTC1	P40046	129 aa	RIP-Chip data	0.93	□□□□□ -2.26	not detected
UBC7	YMR022W	GDS1	P41913	522 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	ASI3	P53983	676 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	DAD3	P69850	94 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	YPL039W	Q03080	316 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	PEX12	Q04370	399 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	GPN3	Q06543	272 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	PML1	Q07930	204 aa	Predicted RBP	0.93	□□□□□ -2.26
UBC7	YMR022W	TY4B-H	P0C2J7	1802 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	TY4B-J	P47024	1803 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	LYS2	P07702	1392 aa		0.93	□□□□□ -2.26
UBC7	YMR022W	CDC37	P06101	506 aa	Known RBP	0.92	□□□□□ -2.26
UBC7	YMR022W	SGA1	P08019	549 aa		0.92	□□□□□ -2.26
UBC7	YMR022W	MAL32	P38158	584 aa		0.92	□□□□□ -2.26
UBC7	YMR022W	FET3	P38993	636 aa		0.92	□□□□□ -2.26
UBC7	YMR022W	LOH1	P47055	219 aa		0.92	□□□□□ -2.26
UBC7	YMR022W	SNX4	P47057	423 aa		0.92	□□□□□ -2.26
UBC7	YMR022W	MAL12	P53341	584 aa		0.92	□□□□□ -2.26
UBC7	YMR022W	TAZ1	Q06510	381 aa		0.92	□□□□□ -2.26
UBC7	YMR022W	SAS5	Q99314	248 aa		0.92	□□□□□ -2.26
UBC7	YMR022W	SAR1	P20606	190 aa	Known RBP	0.91	□□□□□ -2.26
UBC7	YMR022W	PET18	P25362	215 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	ATG15	P25641	520 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
UBC7	YMR022W	SWC5	P38326	303 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	ARN2	P38724	620 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	GTO1	P48239	356 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	SLX9	P53251	210 aa	Predicted RBP	0.91	□□□□□ -2.26
UBC7	YMR022W	VOA1	P53262	265 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	VPS60	Q03390	229 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	POM33	Q12164	279 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	YBL112C	Q3E7Y4	105 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	SIR4	P11978	1358 aa		0.91	□□□□□ -2.26
UBC7	YMR022W	FLO1	P32768	1537 aa		0.9	□□□□□ -2.26
UBC7	YMR022W	CAR2	P07991	424 aa	Known RBP	0.9	□□□□□ -2.27
UBC7	YMR022W	RPL43A	P0CX25	92 aa	Known RBP	0.9	□□□□□ -2.27
UBC7	YMR022W	RPL43B	P0CX26	92 aa		0.9	□□□□□ -2.27
UBC7	YMR022W	FBA1	P14540	359 aa	Known RBP	0.9	□□□□□ -2.27
UBC7	YMR022W	CCA1	P21269	546 aa		0.9	□□□□□ -2.27
UBC7	YMR022W	YCL042W	P25572	119 aa		0.9	□□□□□ -2.27
UBC7	YMR022W	YOR114W	Q12219	294 aa		0.9	□□□□□ -2.27
UBC7	YMR022W	PSY3	Q12318	242 aa		0.9	□□□□□ -2.27
UBC7	YMR022W	YLR419W	Q06698	1435 aa	Known RBP	0.89	□□□□□ -2.27
UBC7	YMR022W	ECM29	P38737	1868 aa		0.89	□□□□□ -2.27
UBC7	YMR022W	NPT1	P39683	429 aa	Known RBP	0.89	□□□□□ -2.27
UBC7	YMR022W	AIM20	P40451	204 aa		0.89	□□□□□ -2.27
UBC7	YMR022W	STE23	Q06010	1027 aa		0.89	□□□□□ -2.27
UBC7	YMR022W	BOP2	Q06150	570 aa		0.89	□□□□□ -2.27
UBC7	YMR022W	PAA1	Q12447	191 aa	Known RBP	0.89	□□□□□ -2.27
UBC7	YMR022W	NOT5	Q12514	560 aa	Predicted RBP	0.89	□□□□□ -2.27
UBC7	YMR022W	YDR524C-B	Q3E6R4	66 aa		0.89	□□□□□ -2.27
UBC7	YMR022W	FKS1	P38631	1876 aa	Known RBP	0.88	□□□□□ -2.27
UBC7	YMR022W	PMD1	P32634	1753 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	RPO41	P13433	1351 aa	Known RBP	0.88	□□□□□ -2.27
UBC7	YMR022W	YAL064W-B	O13512	126 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	MSS116	P15424	664 aa	Known RBP	0.88	□□□□□ -2.27
UBC7	YMR022W	CWP1	P28319	239 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	PEX3	P28795	441 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	YKR045C	P36138	183 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	HMT1	P38074	348 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	APE4	P38821	490 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	YDR089W	P38966	869 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	SSO2	P39926	295 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	AGX1	P43567	385 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	GEP5	Q12393	293 aa		0.88	□□□□□ -2.27
UBC7	YMR022W	PET494	P07390	489 aa	Predicted RBP	0.87	□□□□□ -2.27
UBC7	YMR022W	GDH2	P33327	1092 aa	Known RBP	0.87	□□□□□ -2.27
UBC7	YMR022W	DSE2	P38844	325 aa		0.87	□□□□□ -2.27
UBC7	YMR022W	ERG25	P53045	309 aa		0.87	□□□□□ -2.27
UBC7	YMR022W	TIM21	P53220	239 aa		0.87	□□□□□ -2.27
UBC7	YMR022W	CAB4	P53332	305 aa		0.87	□□□□□ -2.27
UBC7	YMR022W	FMP41	P53889	259 aa	Known RBP	0.87	□□□□□ -2.27
UBC7	YMR022W	MZM1	Q03429	123 aa	Predicted RBP	0.87	□□□□□ -2.27
UBC7	YMR022W	BER1	Q06688	274 aa	Known RBP	0.87	□□□□□ -2.27
UBC7	YMR022W	PER33	Q12144	273 aa		0.87	□□□□□ -2.27
UBC7	YMR022W	YOR097C	Q12274	175 aa	Predicted RBP	0.87	□□□□□ -2.27
UBC7	YMR022W	UTP10	P42945	1769 aa	Known RBP	0.87	□□□□□ -2.27
UBC7	YMR022W	MSB2	P32334	1306 aa		0.87	□□□□□ -2.27
UBC7	YMR022W	YBR056W-A	I2HB52	66 aa		0.86	□□□□□ -2.27
UBC7	YMR022W	ATP6	P00854	259 aa		0.86	□□□□□ -2.27
UBC7	YMR022W	CDC7	P06243	507 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 116.5 ms