RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YBL008W-A	Q3E821	79 aa		3.93	□□□□□ -1.78
RSA3	YLR221C	DPB2	P24482	689 aa	Predicted RBP	3.92	□□□□□ -1.78
RSA3	YLR221C	DRE2	P36152	348 aa		3.92	□□□□□ -1.78
RSA3	YLR221C	SSH1	P38353	490 aa	Known RBP	3.92	□□□□□ -1.78
RSA3	YLR221C	YHR127W	P38833	243 aa	Known RBP	3.92	□□□□□ -1.78
RSA3	YLR221C	RPC17	P47076	161 aa		3.92	□□□□□ -1.78
RSA3	YLR221C	SNZ2	P53824	298 aa		3.92	□□□□□ -1.78
RSA3	YLR221C	TIM22	Q12328	207 aa		3.92	□□□□□ -1.78
RSA3	YLR221C	PPA2	P28239	310 aa		3.91	□□□□□ -1.78
RSA3	YLR221C	VPS21	P36017	210 aa	Known RBP	3.91	□□□□□ -1.78
RSA3	YLR221C	YKL075C	P36083	450 aa		3.91	□□□□□ -1.78
RSA3	YLR221C	SLD7	Q08457	257 aa		3.91	□□□□□ -1.78
RSA3	YLR221C	PST1	Q12355	444 aa		3.91	□□□□□ -1.78
RSA3	YLR221C	PRM7	Q12459	698 aa		3.91	□□□□□ -1.78
RSA3	YLR221C	YCR102C	P25608	368 aa		3.9	□□□□□ -1.79
RSA3	YLR221C	VMA6	P32366	345 aa	Known RBP	3.9	□□□□□ -1.79
RSA3	YLR221C	CAB3	P36076	571 aa		3.9	□□□□□ -1.79
RSA3	YLR221C	MAL32	P38158	584 aa		3.9	□□□□□ -1.79
RSA3	YLR221C	COX15	P40086	486 aa		3.9	□□□□□ -1.79
RSA3	YLR221C	MAL12	P53341	584 aa		3.9	□□□□□ -1.79
RSA3	YLR221C	RHO1	P06780	209 aa	Known RBP	3.89	□□□□□ -1.79
RSA3	YLR221C	RPB4	P20433	221 aa	Predicted RBP	3.89	□□□□□ -1.79
RSA3	YLR221C	ECM13	P38195	257 aa		3.89	□□□□□ -1.79
RSA3	YLR221C	EMI1	Q04406	187 aa		3.89	□□□□□ -1.79
RSA3	YLR221C	YPL247C	Q12523	523 aa		3.89	□□□□□ -1.79
RSA3	YLR221C	NHP6B	P11633	99 aa	Known RBP	3.88	□□□□□ -1.79
RSA3	YLR221C	RNP1	P32385	249 aa		3.88	□□□□□ -1.79
RSA3	YLR221C	PGA2	P53903	129 aa		3.88	□□□□□ -1.79
RSA3	YLR221C	FCF1	Q05498	189 aa	Predicted RBP	3.88	□□□□□ -1.79
RSA3	YLR221C	SEI1	Q06058	285 aa		3.88	□□□□□ -1.79
RSA3	YLR221C	HIS3	P06633	220 aa		3.87	□□□□□ -1.79
RSA3	YLR221C	PPH21	P23594	369 aa		3.87	□□□□□ -1.79
RSA3	YLR221C	TOM40	P23644	387 aa	Known RBP	3.87	□□□□□ -1.79
RSA3	YLR221C	PRE6	P40303	254 aa	Known RBP	3.87	□□□□□ -1.79
RSA3	YLR221C	RLP24	Q07915	199 aa	Known RBP	3.87	□□□□□ -1.79
RSA3	YLR221C	YOR186W	Q08560	144 aa		3.87	□□□□□ -1.79
RSA3	YLR221C	YPR011C	Q12251	326 aa		3.87	□□□□□ -1.79
RSA3	YLR221C	YLR126C	Q12288	251 aa		3.87	□□□□□ -1.79
RSA3	YLR221C	THP2	O13539	261 aa	Known RBP	3.86	□□□□□ -1.79
RSA3	YLR221C	PBN1	P25580	416 aa		3.86	□□□□□ -1.79
RSA3	YLR221C	GDH2	P33327	1092 aa	Known RBP	3.86	□□□□□ -1.79
RSA3	YLR221C	YRB1	P41920	201 aa	Known RBP	3.86	□□□□□ -1.79
RSA3	YLR221C	DCR2	Q05924	578 aa		3.86	□□□□□ -1.79
RSA3	YLR221C	YER189W	P40104	122 aa		3.85	□□□□□ -1.79
RSA3	YLR221C	YMR144W	P40214	342 aa	Known RBP	3.85	□□□□□ -1.79
RSA3	YLR221C	MDM34	P53083	459 aa		3.85	□□□□□ -1.79
RSA3	YLR221C	YGL034C	P53186	121 aa		3.85	□□□□□ -1.79
RSA3	YLR221C	EMP46	Q12396	444 aa		3.85	□□□□□ -1.79
RSA3	YLR221C	NOT5	Q12514	560 aa	Predicted RBP	3.85	□□□□□ -1.79
RSA3	YLR221C	NCB2	Q92317	146 aa		3.85	□□□□□ -1.79
RSA3	YLR221C	SEY1	Q99287	776 aa		3.85	□□□□□ -1.79
RSA3	YLR221C	MET2	P08465	486 aa		3.84	□□□□□ -1.79
RSA3	YLR221C	COQ1	P18900	473 aa		3.84	□□□□□ -1.79
RSA3	YLR221C	RSA4	P25382	515 aa	Known RBP	3.84	□□□□□ -1.79
RSA3	YLR221C	DOA4	P32571	926 aa		3.84	□□□□□ -1.79
RSA3	YLR221C	SSO1	P32867	290 aa		3.84	□□□□□ -1.79
RSA3	YLR221C	YKT6	P36015	200 aa	Known RBP	3.84	□□□□□ -1.79
RSA3	YLR221C	MIC12	P38341	106 aa		3.84	□□□□□ -1.79
RSA3	YLR221C	SEC22	P22214	214 aa		3.83	□□□□□ -1.8
RSA3	YLR221C	CDC10	P25342	322 aa	Known RBP	3.83	□□□□□ -1.8
RSA3	YLR221C	SPO73	P40031	143 aa		3.83	□□□□□ -1.8
RSA3	YLR221C	MCM22	P47167	239 aa		3.83	□□□□□ -1.8
RSA3	YLR221C	YGL088W	P53151	121 aa		3.83	□□□□□ -1.8
RSA3	YLR221C	YNL046W	P53956	172 aa		3.83	□□□□□ -1.8
RSA3	YLR221C	GRX3	Q03835	250 aa		3.83	□□□□□ -1.8
RSA3	YLR221C	FEX1	Q08913	375 aa		3.83	□□□□□ -1.8
RSA3	YLR221C	FEX2	Q08991	375 aa		3.83	□□□□□ -1.8
RSA3	YLR221C	YPR096C	O13587	100 aa		3.82	□□□□□ -1.8
RSA3	YLR221C	RAD10	P06838	210 aa		3.82	□□□□□ -1.8
RSA3	YLR221C	ARG80	P07249	177 aa		3.82	□□□□□ -1.8
RSA3	YLR221C	BCY1	P07278	416 aa	Known RBP	3.82	□□□□□ -1.8
RSA3	YLR221C	YMR31	P19955	123 aa		3.82	□□□□□ -1.8
RSA3	YLR221C	YJR141W	P47172	347 aa	Predicted RBP	3.82	□□□□□ -1.8
RSA3	YLR221C	MIC26	P50087	233 aa		3.82	□□□□□ -1.8
RSA3	YLR221C	BNA7	Q04066	261 aa		3.82	□□□□□ -1.8
RSA3	YLR221C	GEP5	Q12393	293 aa		3.82	□□□□□ -1.8
RSA3	YLR221C	AGC1	Q12482	902 aa		3.82	□□□□□ -1.8
RSA3	YLR221C	SWI1	P09547	1314 aa		3.81	□□□□□ -1.8
RSA3	YLR221C	SPT3	P06844	337 aa		3.81	□□□□□ -1.8
RSA3	YLR221C	YBR121C-A	P0C5L4	52 aa		3.81	□□□□□ -1.8
RSA3	YLR221C	ERD2	P18414	219 aa		3.81	□□□□□ -1.8
RSA3	YLR221C	NTF2	P33331	125 aa	Known RBP	3.81	□□□□□ -1.8
RSA3	YLR221C	NSA1	P53136	463 aa	Predicted RBP	3.81	□□□□□ -1.8
RSA3	YLR221C	YLR179C	Q06252	201 aa	Known RBP	3.81	□□□□□ -1.8
RSA3	YLR221C	YLR462W	O13556	202 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	SNA3	P14359	133 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	STE18	P18852	110 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	RIB1	P38066	345 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	YEL075C	P39972	122 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	ILM1	P47155	203 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	TRM9	P49957	279 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	CGR1	P53188	120 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	YMR114C	Q04471	368 aa	Known RBP	3.8	□□□□□ -1.8
RSA3	YLR221C	CDC123	Q05791	360 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	GIS3	Q12418	502 aa		3.8	□□□□□ -1.8
RSA3	YLR221C	KRE1	P17260	313 aa		3.79	□□□□□ -1.8
RSA3	YLR221C	MIG1	P27705	504 aa		3.79	□□□□□ -1.8
RSA3	YLR221C	URA8	P38627	578 aa	Predicted RBP	3.79	□□□□□ -1.8
RSA3	YLR221C	RTC3	P38804	111 aa	Predicted RBP	3.79	□□□□□ -1.8
RSA3	YLR221C	YJL144W	P47009	104 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms