RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W MSS4P38994 779 aa3.98□□□□□ -1.77
CBF5YLR175W DLS1P40366 167 aa3.98□□□□□ -1.77
CBF5YLR175W XBP1P40489 647 aa3.98□□□□□ -1.77
CBF5YLR175W LOH1P47055 219 aa3.98□□□□□ -1.77
CBF5YLR175W ADO1P47143 340 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W ERV29P53337 310 aa3.98□□□□□ -1.77
CBF5YLR175W PLB2Q03674 706 aa3.98□□□□□ -1.77
CBF5YLR175W PEX10Q05568 337 aa3.98□□□□□ -1.77
CBF5YLR175W RAF1Q06891 181 aa3.98□□□□□ -1.77
CBF5YLR175W SSK1Q07084 712 aa3.98□□□□□ -1.77
CBF5YLR175W YOR352WQ08816 343 aa3.98□□□□□ -1.77
CBF5YLR175W YOR283WQ12040 230 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W TIR4Q12218 487 aaPredicted RBP3.98□□□□□ -1.77
CBF5YLR175W YBR056W-AI2HB52 66 aa3.98□□□□□ -1.77
CBF5YLR175W ADK1P07170 222 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W RPS18AP0CX55 146 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W RPS18BP0CX56 146 aaPredicted RBP3.98□□□□□ -1.77
CBF5YLR175W PDA1P16387 420 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W SED4P25365 1065 aa3.98□□□□□ -1.77
CBF5YLR175W KRE6P32486 720 aa3.98□□□□□ -1.77
CBF5YLR175W NPL6P32832 435 aa3.98□□□□□ -1.77
CBF5YLR175W SNC2P33328 115 aa3.98□□□□□ -1.77
CBF5YLR175W CLG1P35190 452 aa3.98□□□□□ -1.77
CBF5YLR175W RCN1P36054 211 aa3.98□□□□□ -1.77
CBF5YLR175W SSH1P38353 490 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W MTC6P38849 526 aa3.98□□□□□ -1.77
CBF5YLR175W MIT1P40002 666 aa3.98□□□□□ -1.77
CBF5YLR175W SYS1P41544 203 aa3.98□□□□□ -1.77
CBF5YLR175W ERJ5P43613 295 aaPredicted RBP3.98□□□□□ -1.77
CBF5YLR175W AAH1P53909 347 aa3.98□□□□□ -1.77
CBF5YLR175W ASI3P53983 676 aa3.98□□□□□ -1.77
CBF5YLR175W HHT1P61830 136 aa3.98□□□□□ -1.77
CBF5YLR175W RSM23Q01163 450 aa3.98□□□□□ -1.77
CBF5YLR175W YKR005CQ02203 525 aa3.98□□□□□ -1.77
CBF5YLR175W DIG2Q03373 323 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W YAP6Q03935 383 aa3.98□□□□□ -1.77
CBF5YLR175W YDR391CQ04170 232 aa3.98□□□□□ -1.77
CBF5YLR175W NMA1Q06178 401 aaKnown RBP3.98□□□□□ -1.77
CBF5YLR175W YLR352WQ06479 807 aa3.98□□□□□ -1.77
CBF5YLR175W YPL199CQ08954 240 aa3.98□□□□□ -1.77
CBF5YLR175W YPL272CQ08984 517 aa3.98□□□□□ -1.77
CBF5YLR175W ORT1Q12375 292 aa3.98□□□□□ -1.77
CBF5YLR175W IZH2Q12442 317 aa3.98□□□□□ -1.77
CBF5YLR175W CHO1P08456 276 aa3.97□□□□□ -1.77
CBF5YLR175W CNE1P27825 502 aa3.97□□□□□ -1.77
CBF5YLR175W HYM1P32464 399 aa3.97□□□□□ -1.77
CBF5YLR175W SEC66P33754 206 aa3.97□□□□□ -1.77
CBF5YLR175W HTD2P38790 280 aaKnown RBP3.97□□□□□ -1.77
CBF5YLR175W GPI16P38875 610 aa3.97□□□□□ -1.77
CBF5YLR175W URM1P40554 99 aaPredicted RBP3.97□□□□□ -1.77
CBF5YLR175W UBX6P47049 396 aa3.97□□□□□ -1.77
CBF5YLR175W YIP4P53093 235 aa3.97□□□□□ -1.77
CBF5YLR175W POP6P53218 158 aa3.97□□□□□ -1.77
CBF5YLR175W SCW4P53334 386 aaKnown RBP3.97□□□□□ -1.77
CBF5YLR175W NRK1P53915 240 aa3.97□□□□□ -1.77
CBF5YLR175W RPL6AQ02326 176 aaKnown RBP3.97□□□□□ -1.77
CBF5YLR175W RCE1Q03530 315 aa3.97□□□□□ -1.77
CBF5YLR175W KEI1Q06346 221 aa3.97□□□□□ -1.77
CBF5YLR175W PHO92Q06390 306 aa3.97□□□□□ -1.77
CBF5YLR175W MCT1Q12283 360 aa3.97□□□□□ -1.77
CBF5YLR175W COX17Q12287 69 aa3.97□□□□□ -1.77
CBF5YLR175W ISA2Q12425 185 aa3.97□□□□□ -1.77
CBF5YLR175W COX5BP00425 151 aa3.96□□□□□ -1.78
CBF5YLR175W MES1P00958 751 aaKnown RBP3.96□□□□□ -1.78
CBF5YLR175W HEM4P06174 275 aa3.96□□□□□ -1.78
CBF5YLR175W PET54P10834 293 aa3.96□□□□□ -1.78
CBF5YLR175W ATG15P25641 520 aa3.96□□□□□ -1.78
CBF5YLR175W PRE4P30657 266 aa3.96□□□□□ -1.78
CBF5YLR175W SEN34P39707 275 aa3.96□□□□□ -1.78
CBF5YLR175W GPP2P40106 250 aaKnown RBP3.96□□□□□ -1.78
CBF5YLR175W TIR3P40552 269 aa3.96□□□□□ -1.78
CBF5YLR175W BUD8P41698 603 aa3.96□□□□□ -1.78
CBF5YLR175W IDP2P41939 412 aa3.96□□□□□ -1.78
CBF5YLR175W CTK2P46962 323 aa3.96□□□□□ -1.78
CBF5YLR175W LSM7P53905 115 aaKnown RBP3.96□□□□□ -1.78
CBF5YLR175W MRP51Q02950 344 aa3.96□□□□□ -1.78
CBF5YLR175W API2Q04413 109 aa3.96□□□□□ -1.78
CBF5YLR175W INP53Q12271 1107 aa3.96□□□□□ -1.78
CBF5YLR175W Q0142Q9ZZW4 58 aa3.96□□□□□ -1.78
CBF5YLR175W CDC39P25655 2108 aaKnown RBP3.95□□□□□ -1.78
CBF5YLR175W TDH3P00359 332 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
CBF5YLR175W ERG4P25340 473 aa3.95□□□□□ -1.78
CBF5YLR175W PET18P25362 215 aa3.95□□□□□ -1.78
CBF5YLR175W AFG1P32317 509 aa3.95□□□□□ -1.78
CBF5YLR175W PPZ2P33329 710 aa3.95□□□□□ -1.78
CBF5YLR175W APL3P38065 1025 aa3.95□□□□□ -1.78
CBF5YLR175W YHL037CP38733 133 aa3.95□□□□□ -1.78
CBF5YLR175W HPA3P39979 161 aa3.95□□□□□ -1.78
CBF5YLR175W YER084WP40057 128 aa3.95□□□□□ -1.78
CBF5YLR175W RPS0BP46654 252 aaKnown RBP3.95□□□□□ -1.78
CBF5YLR175W YIP5P53108 310 aa3.95□□□□□ -1.78
CBF5YLR175W MTL1P53214 551 aa3.95□□□□□ -1.78
CBF5YLR175W VHT1P53241 593 aa3.95□□□□□ -1.78
CBF5YLR175W GTF1P53260 183 aaPredicted RBP3.95□□□□□ -1.78
CBF5YLR175W CTF19Q02732 369 aa3.95□□□□□ -1.78
CBF5YLR175W ASR1Q06834 288 aa3.95□□□□□ -1.78
CBF5YLR175W SRL2Q12020 392 aa3.95□□□□□ -1.78
CBF5YLR175W USB1Q12208 290 aaKnown RBP3.95□□□□□ -1.78
CBF5YLR175W FOL3Q12676 427 aaPredicted RBP3.95□□□□□ -1.78
CBF5YLR175W NUM1Q00402 2748 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms