RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C YER145C-AA0A023PYF4 145 aa8.53□□□□□ -1.04
YSR3YKR053C SNC2P33328 115 aa8.53□□□□□ -1.04
YSR3YKR053C YND1P40009 630 aa8.53□□□□□ -1.04
YSR3YKR053C YER079WP40052 210 aaKnown RBP8.53□□□□□ -1.04
YSR3YKR053C YJR120WP47157 116 aa8.53□□□□□ -1.04
YSR3YKR053C RNH201P53942 307 aa8.53□□□□□ -1.04
YSR3YKR053C YPL067CQ02754 198 aa8.53□□□□□ -1.04
YSR3YKR053C PRP3Q03338 469 aaPredicted RBP8.53□□□□□ -1.04
YSR3YKR053C MRX9Q07349 420 aaKnown RBP8.53□□□□□ -1.04
YSR3YKR053C YEL009C-AA0A023PZF2 135 aa8.52□□□□□ -1.05
YSR3YKR053C YLR358CO13565 187 aa8.52□□□□□ -1.05
YSR3YKR053C SIR2P06700 562 aa8.52□□□□□ -1.05
YSR3YKR053C ADK1P07170 222 aaKnown RBP8.52□□□□□ -1.05
YSR3YKR053C GPI18P38211 433 aa8.52□□□□□ -1.05
YSR3YKR053C SOL3P38858 249 aa8.52□□□□□ -1.05
YSR3YKR053C RMD6P39975 231 aa8.52□□□□□ -1.05
YSR3YKR053C EFM3P47163 339 aa8.52□□□□□ -1.05
YSR3YKR053C SPO19Q03029 223 aa8.52□□□□□ -1.05
YSR3YKR053C RCF1Q03713 159 aa8.52□□□□□ -1.05
YSR3YKR053C YMR254CQ04838 102 aa8.52□□□□□ -1.05
YSR3YKR053C NMA1Q06178 401 aaKnown RBP8.52□□□□□ -1.05
YSR3YKR053C FCY22Q12119 530 aa8.52□□□□□ -1.05
YSR3YKR053C ORT1Q12375 292 aa8.52□□□□□ -1.05
YSR3YKR053C CCW14O13547 238 aa8.51□□□□□ -1.05
YSR3YKR053C CDC28P00546 298 aaKnown RBP8.51□□□□□ -1.05
YSR3YKR053C OSH7P38755 437 aa8.51□□□□□ -1.05
YSR3YKR053C RBL2P48606 106 aaKnown RBP8.51□□□□□ -1.05
YSR3YKR053C PRM15Q03262 622 aa8.51□□□□□ -1.05
YSR3YKR053C HEM25Q07534 307 aa8.51□□□□□ -1.05
YSR3YKR053C GRC3Q07845 632 aa8.51□□□□□ -1.05
YSR3YKR053C PHO4P07270 312 aaKnown RBP8.5□□□□□ -1.05
YSR3YKR053C ARO7P32178 256 aa8.5□□□□□ -1.05
YSR3YKR053C ERG24P32462 438 aaKnown RBP8.5□□□□□ -1.05
YSR3YKR053C NAT2P37293 288 aa8.5□□□□□ -1.05
YSR3YKR053C CCZ1P38273 704 aa8.5□□□□□ -1.05
YSR3YKR053C PCL6P40038 420 aa8.5□□□□□ -1.05
YSR3YKR053C SLM1P40485 686 aa8.5□□□□□ -1.05
YSR3YKR053C YJL218WP40892 196 aaKnown RBP8.5□□□□□ -1.05
YSR3YKR053C BUD8P41698 603 aa8.5□□□□□ -1.05
YSR3YKR053C GZF3P42944 551 aaKnown RBP8.5□□□□□ -1.05
YSR3YKR053C RPS0BP46654 252 aaKnown RBP8.5□□□□□ -1.05
YSR3YKR053C GON7P46984 123 aa8.5□□□□□ -1.05
YSR3YKR053C SCW11P53189 542 aa8.5□□□□□ -1.05
YSR3YKR053C SCW4P53334 386 aaKnown RBP8.5□□□□□ -1.05
YSR3YKR053C ATG17Q06410 417 aa8.5□□□□□ -1.05
YSR3YKR053C ASR1Q06834 288 aa8.5□□□□□ -1.05
YSR3YKR053C GCD1P09032 578 aaPredicted RBP8.49□□□□□ -1.05
YSR3YKR053C VMA11P32842 164 aa8.49□□□□□ -1.05
YSR3YKR053C SHE2P36068 246 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
YSR3YKR053C YER188WP40103 239 aa8.49□□□□□ -1.05
YSR3YKR053C SSN8P47821 323 aa8.49□□□□□ -1.05
YSR3YKR053C SUT1P53032 299 aaKnown RBP8.49□□□□□ -1.05
YSR3YKR053C RRP17Q04031 235 aaPredicted RBP8.49□□□□□ -1.05
YSR3YKR053C HUT1Q12520 339 aa8.49□□□□□ -1.05
YSR3YKR053C BPH1P25356 2167 aa8.49□□□□□ -1.05
YSR3YKR053C URA2P07259 2214 aaKnown RBP8.49□□□□□ -1.05
YSR3YKR053C GCN4P03069 281 aa8.48□□□□□ -1.05
YSR3YKR053C IES6P32617 166 aa8.48□□□□□ -1.05
YSR3YKR053C MRPL36P36531 177 aa8.48□□□□□ -1.05
YSR3YKR053C FMP23P38231 175 aa8.48□□□□□ -1.05
YSR3YKR053C LNP1P38878 278 aa8.48□□□□□ -1.05
YSR3YKR053C BNA6P43619 295 aa8.48□□□□□ -1.05
YSR3YKR053C XPT1P47165 209 aa8.48□□□□□ -1.05
YSR3YKR053C DOC1P53068 250 aa8.48□□□□□ -1.05
YSR3YKR053C IMO32P53219 342 aa8.48□□□□□ -1.05
YSR3YKR053C YDR114CQ04597 100 aa8.48□□□□□ -1.05
YSR3YKR053C IRC25Q07951 179 aa8.48□□□□□ -1.05
YSR3YKR053C MRPS28P21771 286 aa8.47□□□□□ -1.05
YSR3YKR053C VMA3P25515 160 aa8.47□□□□□ -1.05
YSR3YKR053C TCA17P32613 152 aa8.47□□□□□ -1.05
YSR3YKR053C UFD1P53044 361 aa8.47□□□□□ -1.05
YSR3YKR053C GPN3Q06543 272 aa8.47□□□□□ -1.05
YSR3YKR053C PRP11Q07350 266 aaPredicted RBP8.47□□□□□ -1.05
YSR3YKR053C EAF3Q12432 401 aa8.47□□□□□ -1.05
YSR3YKR053C RPL25P04456 142 aaKnown RBP8.46□□□□□ -1.06
YSR3YKR053C YBR137WP38276 179 aa8.46□□□□□ -1.06
YSR3YKR053C UMP1P38293 148 aa8.46□□□□□ -1.06
YSR3YKR053C SMB1P40018 196 aaKnown RBP8.46□□□□□ -1.06
YSR3YKR053C RTT105P40063 208 aa8.46□□□□□ -1.06
YSR3YKR053C MRX5P47007 382 aa8.46□□□□□ -1.06
YSR3YKR053C MRH4P53166 561 aa8.46□□□□□ -1.06
YSR3YKR053C RIM9Q04734 239 aa8.46□□□□□ -1.06
YSR3YKR053C YLR283WQ05867 314 aa8.46□□□□□ -1.06
YSR3YKR053C MDM36Q06820 579 aa8.46□□□□□ -1.06
YSR3YKR053C YOR186WQ08560 144 aa8.46□□□□□ -1.06
YSR3YKR053C YDL009CQ12210 107 aa8.46□□□□□ -1.06
YSR3YKR053C TIR4Q12218 487 aaPredicted RBP8.46□□□□□ -1.06
YSR3YKR053C MPD1Q12404 318 aaKnown RBP8.46□□□□□ -1.06
YSR3YKR053C YMR105W-AQ8TGS8 64 aa8.46□□□□□ -1.06
YSR3YKR053C HIS3P06633 220 aa8.45□□□□□ -1.06
YSR3YKR053C RPL24BP24000 155 aaKnown RBP8.45□□□□□ -1.06
YSR3YKR053C PET18P25362 215 aa8.45□□□□□ -1.06
YSR3YKR053C CNE1P27825 502 aa8.45□□□□□ -1.06
YSR3YKR053C IMP1P28627 190 aa8.45□□□□□ -1.06
YSR3YKR053C PEX4P29340 183 aa8.45□□□□□ -1.06
YSR3YKR053C ZUO1P32527 433 aaKnown RBP8.45□□□□□ -1.06
YSR3YKR053C TMA19P35691 167 aaKnown RBP8.45□□□□□ -1.06
YSR3YKR053C IES5P40060 125 aa8.45□□□□□ -1.06
YSR3YKR053C AIR1P40507 360 aaKnown RBP8.45□□□□□ -1.06
YSR3YKR053C ARG5,6Q01217 863 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms