RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C HMLALPHA1P0CY07 175 aa1.65□□□□□ -2.15
VPS35YJL154C MRPL6P32904 214 aa1.65□□□□□ -2.15
VPS35YJL154C YKL063CP35725 167 aa1.65□□□□□ -2.15
VPS35YJL154C SMP1P38128 452 aa1.65□□□□□ -2.15
VPS35YJL154C PHB1P40961 287 aa1.65□□□□□ -2.15
VPS35YJL154C IBA57P47158 497 aa1.65□□□□□ -2.15
VPS35YJL154C COQ5P49017 307 aa1.65□□□□□ -2.15
VPS35YJL154C YDC1Q02896 317 aa1.65□□□□□ -2.15
VPS35YJL154C GMC1Q04399 608 aa1.65□□□□□ -2.15
VPS35YJL154C DCR2Q05924 578 aa1.65□□□□□ -2.15
VPS35YJL154C ARC18Q05933 178 aaKnown RBP1.65□□□□□ -2.15
VPS35YJL154C LSO2Q3E772 92 aaKnown RBP1.65□□□□□ -2.15
VPS35YJL154C IRA2P19158 3079 aa1.65□□□□□ -2.15
VPS35YJL154C TUS1Q06412 1307 aa1.65□□□□□ -2.15
VPS35YJL154C LYS2P07702 1392 aa1.64□□□□□ -2.15
VPS35YJL154C ADH1P00330 348 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C SOD1P00445 154 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C NHP6BP11633 99 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C YSR3P23501 404 aa1.64□□□□□ -2.15
VPS35YJL154C GCG1P32656 232 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C HIS2P38635 335 aa1.64□□□□□ -2.15
VPS35YJL154C YER121WP40076 114 aa1.64□□□□□ -2.15
VPS35YJL154C YER137CP40083 148 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C FMP33P46998 180 aa1.64□□□□□ -2.15
VPS35YJL154C YGL118CP53132 145 aa1.64□□□□□ -2.15
VPS35YJL154C YPL077CQ02831 240 aa1.64□□□□□ -2.15
VPS35YJL154C YMR209CQ03648 457 aa1.64□□□□□ -2.15
VPS35YJL154C MYO5Q04439 1219 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C YMR226CQ05016 267 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C CDC123Q05791 360 aa1.64□□□□□ -2.15
VPS35YJL154C SPO77Q06134 477 aa1.64□□□□□ -2.15
VPS35YJL154C CDD1Q06549 142 aa1.64□□□□□ -2.15
VPS35YJL154C GRE1Q08969 168 aa1.64□□□□□ -2.15
VPS35YJL154C RAX2Q12465 1220 aa1.64□□□□□ -2.15
VPS35YJL154C NOT5Q12514 560 aaPredicted RBP1.64□□□□□ -2.15
VPS35YJL154C YAL067W-AQ8TGK6 75 aa1.64□□□□□ -2.15
VPS35YJL154C COX2P00410 251 aa1.64□□□□□ -2.15
VPS35YJL154C CDC33P07260 213 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C RPL27AP0C2H6 136 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C RPL27BP0C2H7 136 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C MATALPHA2P0CY08 210 aa1.64□□□□□ -2.15
VPS35YJL154C HMLALPHA2P0CY09 210 aa1.64□□□□□ -2.15
VPS35YJL154C VPH2P32341 215 aa1.64□□□□□ -2.15
VPS35YJL154C YKL187CP34231 750 aa1.64□□□□□ -2.15
VPS35YJL154C AME1P38313 324 aa1.64□□□□□ -2.15
VPS35YJL154C YJR056CP47115 236 aa1.64□□□□□ -2.15
VPS35YJL154C TPC1P53257 314 aa1.64□□□□□ -2.15
VPS35YJL154C BTS1Q12051 335 aa1.64□□□□□ -2.15
VPS35YJL154C YOR029WQ12243 111 aa1.64□□□□□ -2.15
VPS35YJL154C AUS1Q08409 1394 aa1.64□□□□□ -2.15
VPS35YJL154C SEC16P48415 2195 aaKnown RBP1.64□□□□□ -2.15
VPS35YJL154C SNF6P18888 332 aa1.63□□□□□ -2.15
VPS35YJL154C PPA2P28239 310 aa1.63□□□□□ -2.15
VPS35YJL154C CDC13P32797 924 aaKnown RBP1.63□□□□□ -2.15
VPS35YJL154C TIP20P33891 701 aa1.63□□□□□ -2.15
VPS35YJL154C CAF4P36130 643 aa1.63□□□□□ -2.15
VPS35YJL154C RIB1P38066 345 aa1.63□□□□□ -2.15
VPS35YJL154C HMT1P38074 348 aa1.63□□□□□ -2.15
VPS35YJL154C URA8P38627 578 aaPredicted RBP1.63□□□□□ -2.15
VPS35YJL154C VMA22P38784 181 aa1.63□□□□□ -2.15
VPS35YJL154C FRT2P39734 528 aa1.63□□□□□ -2.15
VPS35YJL154C GIM4P40005 111 aaKnown RBP1.63□□□□□ -2.15
VPS35YJL154C YIL001WP40560 513 aa1.63□□□□□ -2.15
VPS35YJL154C AGP3P43548 558 aa1.63□□□□□ -2.15
VPS35YJL154C MIC19P43594 170 aa1.63□□□□□ -2.15
VPS35YJL154C YJL118WP47022 219 aa1.63□□□□□ -2.15
VPS35YJL154C SDS23P53172 527 aa1.63□□□□□ -2.15
VPS35YJL154C BIO4P53630 237 aa1.63□□□□□ -2.15
VPS35YJL154C COX20Q04935 205 aa1.63□□□□□ -2.15
VPS35YJL154C PAM18Q07914 168 aa1.63□□□□□ -2.15
VPS35YJL154C YCL012CQ8J0M4 134 aa1.63□□□□□ -2.15
VPS35YJL154C RAD3P06839 778 aa1.63□□□□□ -2.15
VPS35YJL154C RPL31AP0C2H8 113 aaKnown RBP1.63□□□□□ -2.15
VPS35YJL154C FBA1P14540 359 aaKnown RBP1.63□□□□□ -2.15
VPS35YJL154C SKG6P32900 734 aaPredicted RBP1.63□□□□□ -2.15
VPS35YJL154C LDB7P38210 180 aa1.63□□□□□ -2.15
VPS35YJL154C FIG1P38224 298 aa1.63□□□□□ -2.15
VPS35YJL154C ASG7P46993 209 aa1.63□□□□□ -2.15
VPS35YJL154C ALB1P47019 175 aaPredicted RBP1.63□□□□□ -2.15
VPS35YJL154C YGL159WP53110 370 aa1.63□□□□□ -2.15
VPS35YJL154C YGR018CP53211 109 aa1.63□□□□□ -2.15
VPS35YJL154C YIP3P53633 176 aa1.63□□□□□ -2.15
VPS35YJL154C CTF19Q02732 369 aa1.63□□□□□ -2.15
VPS35YJL154C PRM15Q03262 622 aa1.63□□□□□ -2.15
VPS35YJL154C EBS1Q03466 884 aaKnown RBP1.63□□□□□ -2.15
VPS35YJL154C SCS7Q03529 384 aa1.63□□□□□ -2.15
VPS35YJL154C FAR8Q05040 523 aa1.63□□□□□ -2.15
VPS35YJL154C TIR4Q12218 487 aaPredicted RBP1.63□□□□□ -2.15
VPS35YJL154C RHO1P06780 209 aaKnown RBP1.62□□□□□ -2.15
VPS35YJL154C RPL24BP24000 155 aaKnown RBP1.62□□□□□ -2.15
VPS35YJL154C PRP18P33411 251 aaPredicted RBP1.62□□□□□ -2.15
VPS35YJL154C AST1P35183 429 aa1.62□□□□□ -2.15
VPS35YJL154C MCH2P36032 473 aa1.62□□□□□ -2.15
VPS35YJL154C YPC1P38298 316 aa1.62□□□□□ -2.15
VPS35YJL154C RCK1P38622 512 aa1.62□□□□□ -2.15
VPS35YJL154C PET8P38921 284 aa1.62□□□□□ -2.15
VPS35YJL154C SOK1P40317 901 aa1.62□□□□□ -2.15
VPS35YJL154C SLM1P40485 686 aa1.62□□□□□ -2.15
VPS35YJL154C YIL012WP40551 113 aa1.62□□□□□ -2.15
VPS35YJL154C UFE1P41834 346 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms